RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 NISCHQ9Y2I1 1504 aa40.59■■■■■ 4.09
SDHC-209ENST00000515731 CCDC180Q9P1Z9 1646 aa36.56■■■■□ 3.44
SDHC-209ENST00000515731 ABCC9O60706 1549 aa36.43■■■■□ 3.42
SDHC-209ENST00000515731 RB1CC1Q8TDY2 1594 aa34.76■■■■□ 3.16
SDHC-209ENST00000515731 NACADO15069 1562 aa34.53■■■■□ 3.12
SDHC-209ENST00000515731 DNAJC5BQ9UF47 199 aa34.28■■■■□ 3.08
SDHC-209ENST00000515731 MYO15BQ96JP2 1530 aa34.11■■■■□ 3.05
SDHC-209ENST00000515731 DCAF8L2P0C7V8 631 aa34.07■■■■□ 3.04
SDHC-209ENST00000515731 UNC13AQ9UPW8 1703 aa34.06■■■■□ 3.04
SDHC-209ENST00000515731 PABPN1Q86U42 306 aaKnown RBP eCLIP33.85■■■■□ 3.01
SDHC-209ENST00000515731 BICRAQ9NZM4 1560 aa33.77■■■■□ 3
SDHC-209ENST00000515731 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
SDHC-209ENST00000515731 DCAF1Q9Y4B6 1507 aa33.62■■■□□ 2.97
SDHC-209ENST00000515731 SHROOM4Q9ULL8 1493 aa33.37■■■□□ 2.93
SDHC-209ENST00000515731 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
SDHC-209ENST00000515731 CC2D2AQ9P2K1 1620 aa33■■■□□ 2.87
SDHC-209ENST00000515731 EIF4G1Q04637 1599 aaKnown RBP32.92■■■□□ 2.86
SDHC-209ENST00000515731 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
SDHC-209ENST00000515731 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
SDHC-209ENST00000515731 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
SDHC-209ENST00000515731 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
SDHC-209ENST00000515731 SMARCA2P51531 1590 aa31.65■■■□□ 2.66
SDHC-209ENST00000515731 HMGXB3Q12766 1538 aa31.64■■■□□ 2.66
SDHC-209ENST00000515731 DNAJC5Q9H3Z4 198 aa31.59■■■□□ 2.65
SDHC-209ENST00000515731 CUX2O14529 1486 aa31.54■■■□□ 2.64
SDHC-209ENST00000515731 BAZ1AQ9NRL2 1556 aaPredicted RBP31.52■■■□□ 2.64
SDHC-209ENST00000515731 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
SDHC-209ENST00000515731 ERCC6Q03468 1493 aa31.45■■■□□ 2.62
SDHC-209ENST00000515731 BAZ1BQ9UIG0 1483 aaKnown RBP31.37■■■□□ 2.61
SDHC-209ENST00000515731 NESP48681 1621 aa31.29■■■□□ 2.6
SDHC-209ENST00000515731 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
SDHC-209ENST00000515731 LAMC3Q9Y6N6 1575 aa31.17■■■□□ 2.58
SDHC-209ENST00000515731 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
SDHC-209ENST00000515731 KIF21AQ7Z4S6 1674 aa30.97■■■□□ 2.55
SDHC-209ENST00000515731 PDS5BQ9NTI5 1447 aa30.94■■■□□ 2.54
SDHC-209ENST00000515731 WIZO95785 1651 aa30.87■■■□□ 2.53
SDHC-209ENST00000515731 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
SDHC-209ENST00000515731 MRC2Q9UBG0 1479 aa30.66■■■□□ 2.5
SDHC-209ENST00000515731 WDR62O43379 1518 aa30.64■■■□□ 2.5
SDHC-209ENST00000515731 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
SDHC-209ENST00000515731 CFTRP13569 1480 aa30.51■■■□□ 2.48
SDHC-209ENST00000515731 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.48
SDHC-209ENST00000515731 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
SDHC-209ENST00000515731 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
SDHC-209ENST00000515731 PRDM2Q13029 1718 aa30.31■■■□□ 2.44
SDHC-209ENST00000515731 URB2Q14146 1524 aaKnown RBP30.24■■■□□ 2.43
SDHC-209ENST00000515731 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
SDHC-209ENST00000515731 OSCARQ8IYS5 282 aa30.02■■■□□ 2.4
SDHC-209ENST00000515731 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
SDHC-209ENST00000515731 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
SDHC-209ENST00000515731 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
SDHC-209ENST00000515731 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
SDHC-209ENST00000515731 ZNF608Q9ULD9 1512 aaPredicted RBP29.85■■■□□ 2.37
SDHC-209ENST00000515731 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
SDHC-209ENST00000515731 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
SDHC-209ENST00000515731 TARBP1Q13395 1621 aaKnown RBP29.71■■■□□ 2.35
SDHC-209ENST00000515731 RIMBP3CA6NJZ7 1639 aa29.69■■■□□ 2.34
SDHC-209ENST00000515731 RIMBP3BA6NNM3 1639 aa29.69■■■□□ 2.34
SDHC-209ENST00000515731 RIMBP3Q9UFD9 1639 aa29.69■■■□□ 2.34
SDHC-209ENST00000515731 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
SDHC-209ENST00000515731 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
SDHC-209ENST00000515731 AQRO60306 1485 aaKnown RBP eCLIP29.55■■■□□ 2.32
SDHC-209ENST00000515731 CHD1O14646 1710 aa29.55■■■□□ 2.32
SDHC-209ENST00000515731 WDR97A6NE52 1622 aa29.46■■■□□ 2.31
SDHC-209ENST00000515731 SOGA1O94964 1423 aa29.44■■■□□ 2.3
SDHC-209ENST00000515731 RAD54L2Q9Y4B4 1467 aa29.43■■■□□ 2.3
SDHC-209ENST00000515731 FGD5Q6ZNL6 1462 aa29.37■■■□□ 2.29
SDHC-209ENST00000515731 CUX1P39880 1505 aa29.35■■■□□ 2.29
SDHC-209ENST00000515731 TDRD9Q8NDG6 1382 aaKnown RBP29.34■■■□□ 2.29
SDHC-209ENST00000515731 FBLN2P98095 1184 aa29.28■■■□□ 2.28
SDHC-209ENST00000515731 SNAPC4Q5SXM2 1469 aa29.26■■■□□ 2.27
SDHC-209ENST00000515731 CYB5RLQ6IPT4 315 aa29.26■■■□□ 2.27
SDHC-209ENST00000515731 ARAP1Q96P48 1450 aa29.25■■■□□ 2.27
SDHC-209ENST00000515731 MAGI1Q96QZ7 1491 aaPredicted RBP29.25■■■□□ 2.27
SDHC-209ENST00000515731 CLASP1Q7Z460 1538 aa29.21■■■□□ 2.27
SDHC-209ENST00000515731 GRIN2BQ13224 1484 aa29.21■■■□□ 2.27
SDHC-209ENST00000515731 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
SDHC-209ENST00000515731 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
SDHC-209ENST00000515731 SYNJ2O15056 1496 aa29.13■■■□□ 2.25
SDHC-209ENST00000515731 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
SDHC-209ENST00000515731 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
SDHC-209ENST00000515731 GAPVD1Q14C86 1478 aa29.09■■■□□ 2.25
SDHC-209ENST00000515731 ABCA5Q8WWZ7 1642 aa29.08■■■□□ 2.25
SDHC-209ENST00000515731 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
SDHC-209ENST00000515731 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.23
SDHC-209ENST00000515731 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
SDHC-209ENST00000515731 TRHP20396 242 aaPredicted RBP28.91■■■□□ 2.22
SDHC-209ENST00000515731 WRNQ14191 1432 aaPredicted RBP eCLIP28.91■■■□□ 2.22
SDHC-209ENST00000515731 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
SDHC-209ENST00000515731 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
SDHC-209ENST00000515731 NUP160Q12769 1436 aa28.77■■■□□ 2.2
SDHC-209ENST00000515731 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
SDHC-209ENST00000515731 CEP170Q5SW79 1584 aa28.74■■■□□ 2.19
SDHC-209ENST00000515731 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
SDHC-209ENST00000515731 SHROOM2Q13796 1616 aa28.71■■■□□ 2.19
SDHC-209ENST00000515731 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
SDHC-209ENST00000515731 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
SDHC-209ENST00000515731 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
SDHC-209ENST00000515731 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
SDHC-209ENST00000515731 KIF13AQ9H1H9 1805 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms