Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.32e-11■□□□□ 8.5
PABPN1Q86U42 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.172e-11■□□□□ 8.5
PABPN1Q86U42 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.318e-7■□□□□ 8.5
PABPN1Q86U42 EML4-204ENST00000406175 4622 ntTSL 1 (best)8.73□□□□□ -1.018e-7■□□□□ 8.5
PABPN1Q86U42 CFI-206ENST00000515512 791 ntTSL 211.48□□□□□ -0.576e-9■□□□□ 8.5
PABPN1Q86U42 ZFAS1-207ENST00000458653 596 ntTSL 256.37■■■■■ 6.612e-7■□□□□ 8.5
PABPN1Q86U42 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)51.41■■■■■ 5.822e-7■□□□□ 8.5
PABPN1Q86U42 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)50.71■■■■■ 5.712e-7■□□□□ 8.5
PABPN1Q86U42 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)42.67■■■■■ 4.422e-7■□□□□ 8.5
PABPN1Q86U42 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC42.67■■■■■ 4.422e-7■□□□□ 8.5
PABPN1Q86U42 PTK7-207ENST00000461389 1035 ntTSL 228.37■■■□□ 2.132e-7■□□□□ 8.5
PABPN1Q86U42 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.852e-7■□□□□ 8.5
PABPN1Q86U42 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC18.1■□□□□ 0.492e-7■□□□□ 8.5
PABPN1Q86U42 ZFAS1-209ENST00000620594 508 ntTSL 316.2■□□□□ 0.182e-7■□□□□ 8.5
PABPN1Q86U42 PTK7-213ENST00000481273 3436 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.152e-7■□□□□ 8.5
PABPN1Q86U42 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)15.88■□□□□ 0.132e-7■□□□□ 8.5
PABPN1Q86U42 ZFAS1-204ENST00000428008 566 ntTSL 215.88■□□□□ 0.132e-7■□□□□ 8.5
PABPN1Q86U42 MTATP6P1-201ENST00000514057 681 ntBASIC14.38□□□□□ -0.111e-323■□□□□ 8.4
PABPN1Q86U42 GANAB-211ENST00000532402 3718 ntTSL 1 (best)17.45■□□□□ 0.385e-6■□□□□ 8.4
PABPN1Q86U42 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.35e-6■□□□□ 8.4
PABPN1Q86U42 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.255e-6■□□□□ 8.4
PABPN1Q86U42 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.255e-6■□□□□ 8.4
PABPN1Q86U42 FGFR4-215ENST00000513423 445 ntTSL 226.59■■□□□ 1.853e-12■□□□□ 8.4
PABPN1Q86U42 PROC-204ENST00000419985 500 ntTSL 444.58■■■■■ 4.735e-10■□□□□ 8.4
PABPN1Q86U42 ILF3-215ENST00000589485 620 ntTSL 241.35■■■■■ 4.215e-10■□□□□ 8.4
PABPN1Q86U42 PROC-208ENST00000442644 600 ntTSL 340.38■■■■■ 4.055e-10■□□□□ 8.4
PABPN1Q86U42 ILF3-207ENST00000587840 655 ntTSL 533.1■■■□□ 2.895e-10■□□□□ 8.4
PABPN1Q86U42 ILF3-206ENST00000587505 791 ntTSL 532.51■■■□□ 2.795e-10■□□□□ 8.4
PABPN1Q86U42 ILF3-214ENST00000589416 773 ntTSL 429.23■■■□□ 2.275e-10■□□□□ 8.4
PABPN1Q86U42 ILF3-212ENST00000589173 570 ntTSL 528.6■■■□□ 2.175e-10■□□□□ 8.4
PABPN1Q86U42 ILF3-204ENST00000585835 849 ntTSL 328.16■■■□□ 2.15e-10■□□□□ 8.4
PABPN1Q86U42 APOC4-APOC2-201ENST00000585685 1829 ntTSL 526.79■■□□□ 1.885e-10■□□□□ 8.4
PABPN1Q86U42 CPNE1-227ENST00000498056 362 ntTSL 225.6■■□□□ 1.695e-10■□□□□ 8.4
PABPN1Q86U42 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.625e-10■□□□□ 8.4
PABPN1Q86U42 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.315e-10■□□□□ 8.4
PABPN1Q86U42 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.745e-10■□□□□ 8.4
PABPN1Q86U42 EEF2-207ENST00000600794 352 ntTSL 319.06■□□□□ 0.645e-10■□□□□ 8.4
PABPN1Q86U42 APOC2-202ENST00000585786 880 ntTSL 2 BASIC17.54■□□□□ 0.45e-10■□□□□ 8.4
PABPN1Q86U42 APOC2-204ENST00000591597 447 ntTSL 5 BASIC17.54■□□□□ 0.45e-10■□□□□ 8.4
PABPN1Q86U42 APOC2-205ENST00000592257 444 ntTSL 3 BASIC13.36□□□□□ -0.275e-10■□□□□ 8.4
PABPN1Q86U42 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.295e-10■□□□□ 8.4
PABPN1Q86U42 CTSH-202ENST00000525807 1122 ntTSL 538.64■■■■□ 3.784e-7■□□□□ 8.4
PABPN1Q86U42 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.684e-7■□□□□ 8.4
PABPN1Q86U42 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.184e-7■□□□□ 8.4
PABPN1Q86U42 MAPK8IP3-203ENST00000561765 2374 ntTSL 1 (best)27.8■■■□□ 2.044e-7■□□□□ 8.4
PABPN1Q86U42 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC27.59■■■□□ 2.014e-7■□□□□ 8.4
PABPN1Q86U42 CTSH-213ENST00000533777 2101 ntTSL 1 (best)27.29■■□□□ 1.964e-7■□□□□ 8.4
PABPN1Q86U42 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC27.12■■□□□ 1.934e-7■□□□□ 8.4
PABPN1Q86U42 MAPK8IP3-207ENST00000564098 4436 ntTSL 224.3■■□□□ 1.484e-7■□□□□ 8.4
PABPN1Q86U42 CTSH-215ENST00000534237 691 ntTSL 323.08■■□□□ 1.294e-7■□□□□ 8.4
PABPN1Q86U42 CTSH-217ENST00000534533 836 ntTSL 321.32■■□□□ 14e-7■□□□□ 8.4
PABPN1Q86U42 CTSH-204ENST00000527715 2138 ntTSL 1 (best)20.38■□□□□ 0.854e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC14.16□□□□□ -0.144e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.174e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.34e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC13.18□□□□□ -0.34e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC13.18□□□□□ -0.34e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC13.1□□□□□ -0.314e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC13.1□□□□□ -0.314e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC12.8□□□□□ -0.364e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC12.44□□□□□ -0.424e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC12.16□□□□□ -0.464e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC12.05□□□□□ -0.484e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC12.05□□□□□ -0.484e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC12.05□□□□□ -0.484e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.514e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC11.72□□□□□ -0.534e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC11.69□□□□□ -0.544e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC11.62□□□□□ -0.554e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC11.47□□□□□ -0.574e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC11.34□□□□□ -0.594e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC11.34□□□□□ -0.594e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC11.14□□□□□ -0.634e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC11.14□□□□□ -0.634e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC10.92□□□□□ -0.664e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC10.49□□□□□ -0.734e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC10.49□□□□□ -0.734e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC10.38□□□□□ -0.754e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC10.13□□□□□ -0.794e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC9.67□□□□□ -0.864e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.3□□□□□ -1.084e-7■□□□□ 8.4
PABPN1Q86U42 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.78□□□□□ -1.164e-7■□□□□ 8.4
PABPN1Q86U42 RBM39-236ENST00000490484 871 ntTSL 521.18■□□□□ 0.983e-28■□□□□ 8.4
PABPN1Q86U42 SEMA3B-215ENST00000621029 934 ntTSL 558.78■■■■■ 79e-7■□□□□ 8.3
PABPN1Q86U42 PACSIN3-207ENST00000530513 912 ntTSL 347.11■■■■■ 5.139e-7■□□□□ 8.3
PABPN1Q86U42 CHRD-217ENST00000496527 588 ntTSL 444.8■■■■■ 4.761e-8■□□□□ 8.3
PABPN1Q86U42 PACSIN3-205ENST00000528462 1560 ntTSL 241.24■■■■■ 4.199e-7■□□□□ 8.3
PABPN1Q86U42 PACSIN3-209ENST00000532457 1845 ntTSL 540.63■■■■■ 4.099e-7■□□□□ 8.3
PABPN1Q86U42 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.629e-7■□□□□ 8.3
PABPN1Q86U42 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC35.57■■■■□ 3.299e-7■□□□□ 8.3
PABPN1Q86U42 TNPO2-212ENST00000588491 737 ntTSL 534■■■■□ 3.039e-7■□□□□ 8.3
PABPN1Q86U42 EIF3G-207ENST00000589009 1522 ntTSL 231.79■■■□□ 2.689e-7■□□□□ 8.3
PABPN1Q86U42 PACSIN3-210ENST00000533686 443 ntTSL 331.6■■■□□ 2.659e-7■□□□□ 8.3
PABPN1Q86U42 CCDC14-209ENST00000435910 864 ntTSL 331.46■■■□□ 2.639e-7■□□□□ 8.3
PABPN1Q86U42 EIF3G-212ENST00000592485 893 ntTSL 229.79■■■□□ 2.369e-7■□□□□ 8.3
PABPN1Q86U42 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC27.72■■■□□ 2.039e-7■□□□□ 8.3
PABPN1Q86U42 CCDC14-213ENST00000477268 589 ntTSL 427.08■■□□□ 1.939e-7■□□□□ 8.3
PABPN1Q86U42 RTKN-211ENST00000640304 612 ntTSL 527.06■■□□□ 1.929e-7■□□□□ 8.3
PABPN1Q86U42 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC26.64■■□□□ 1.859e-7■□□□□ 8.3
PABPN1Q86U42 TNPO2-204ENST00000585886 2362 ntTSL 1 (best)26.62■■□□□ 1.859e-7■□□□□ 8.3
Retrieved 100 of 8,254 protein–RNA pairs in 1330.7 ms