RNA–Protein interactions for RNA: ENST00000615999.4

CTSH-218, Transcript of cathepsin H, humanhuman

TSL 1 (best) BASIC

Gene CTSH, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-218ENST00000615999 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
CTSH-218ENST00000615999 ABCC9O60706 1549 aa29.1■■■□□ 2.25
CTSH-218ENST00000615999 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
CTSH-218ENST00000615999 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
CTSH-218ENST00000615999 NACADO15069 1562 aa27.59■■■□□ 2.01
CTSH-218ENST00000615999 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
CTSH-218ENST00000615999 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
CTSH-218ENST00000615999 MYO15BQ96JP2 1530 aa27.24■■□□□ 1.95
CTSH-218ENST00000615999 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.934e-7■□□□□ 8.4
CTSH-218ENST00000615999 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
CTSH-218ENST00000615999 DCAF1Q9Y4B6 1507 aa26.84■■□□□ 1.89
CTSH-218ENST00000615999 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
CTSH-218ENST00000615999 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
CTSH-218ENST00000615999 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.87
CTSH-218ENST00000615999 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
CTSH-218ENST00000615999 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
CTSH-218ENST00000615999 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
CTSH-218ENST00000615999 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
CTSH-218ENST00000615999 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
CTSH-218ENST00000615999 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
CTSH-218ENST00000615999 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
CTSH-218ENST00000615999 DNAJC5Q9H3Z4 198 aa25.28■■□□□ 1.64
CTSH-218ENST00000615999 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
CTSH-218ENST00000615999 HMGXB3Q12766 1538 aa25.25■■□□□ 1.63
CTSH-218ENST00000615999 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
CTSH-218ENST00000615999 CUX2O14529 1486 aa25.23■■□□□ 1.63
CTSH-218ENST00000615999 BAZ1AQ9NRL2 1556 aaPredicted RBP25.21■■□□□ 1.63
CTSH-218ENST00000615999 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
CTSH-218ENST00000615999 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
CTSH-218ENST00000615999 NESP48681 1621 aa24.93■■□□□ 1.58
CTSH-218ENST00000615999 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
CTSH-218ENST00000615999 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
CTSH-218ENST00000615999 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
CTSH-218ENST00000615999 CADPSQ9ULU8 1353 aa24.72■■□□□ 1.55
CTSH-218ENST00000615999 THOC2Q8NI27 1593 aaKnown RBP24.69■■□□□ 1.54
CTSH-218ENST00000615999 KIF21AQ7Z4S6 1674 aa24.58■■□□□ 1.53
CTSH-218ENST00000615999 WIZO95785 1651 aa24.55■■□□□ 1.52
CTSH-218ENST00000615999 MRC2Q9UBG0 1479 aa24.53■■□□□ 1.52
CTSH-218ENST00000615999 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
CTSH-218ENST00000615999 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
CTSH-218ENST00000615999 WDR62O43379 1518 aa24.43■■□□□ 1.5
CTSH-218ENST00000615999 CFTRP13569 1480 aa24.38■■□□□ 1.49
CTSH-218ENST00000615999 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
CTSH-218ENST00000615999 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
CTSH-218ENST00000615999 OSCARQ8IYS5 282 aa24.15■■□□□ 1.46
CTSH-218ENST00000615999 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
CTSH-218ENST00000615999 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
CTSH-218ENST00000615999 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
CTSH-218ENST00000615999 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
CTSH-218ENST00000615999 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
CTSH-218ENST00000615999 IFT140Q96RY7 1462 aa23.98■■□□□ 1.43
CTSH-218ENST00000615999 TOPBP1Q92547 1522 aa23.88■■□□□ 1.41
CTSH-218ENST00000615999 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
CTSH-218ENST00000615999 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
CTSH-218ENST00000615999 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
CTSH-218ENST00000615999 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.387e-7■■■■□ 24.7
CTSH-218ENST00000615999 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
CTSH-218ENST00000615999 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
CTSH-218ENST00000615999 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
CTSH-218ENST00000615999 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
CTSH-218ENST00000615999 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
CTSH-218ENST00000615999 FBLN2P98095 1184 aa23.61■■□□□ 1.37
CTSH-218ENST00000615999 SOGA1O94964 1423 aa23.6■■□□□ 1.37
CTSH-218ENST00000615999 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
CTSH-218ENST00000615999 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
CTSH-218ENST00000615999 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
CTSH-218ENST00000615999 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
CTSH-218ENST00000615999 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
CTSH-218ENST00000615999 CHMP7Q8WUX9 453 aaPredicted RBP23.47■■□□□ 1.35
CTSH-218ENST00000615999 FGD5Q6ZNL6 1462 aa23.47■■□□□ 1.35
CTSH-218ENST00000615999 CHD1O14646 1710 aa23.45■■□□□ 1.34
CTSH-218ENST00000615999 MAGI1Q96QZ7 1491 aaPredicted RBP23.42■■□□□ 1.34
CTSH-218ENST00000615999 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
CTSH-218ENST00000615999 CUX1P39880 1505 aa23.4■■□□□ 1.34
CTSH-218ENST00000615999 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
CTSH-218ENST00000615999 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
CTSH-218ENST00000615999 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
CTSH-218ENST00000615999 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
CTSH-218ENST00000615999 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
CTSH-218ENST00000615999 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
CTSH-218ENST00000615999 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
CTSH-218ENST00000615999 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
CTSH-218ENST00000615999 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
CTSH-218ENST00000615999 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
CTSH-218ENST00000615999 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
CTSH-218ENST00000615999 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
CTSH-218ENST00000615999 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
CTSH-218ENST00000615999 GRIN2AQ12879 1464 aa23.05■■□□□ 1.28
CTSH-218ENST00000615999 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
CTSH-218ENST00000615999 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
CTSH-218ENST00000615999 NUP160Q12769 1436 aa22.99■■□□□ 1.27
CTSH-218ENST00000615999 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
CTSH-218ENST00000615999 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
CTSH-218ENST00000615999 CEP170Q5SW79 1584 aa22.89■■□□□ 1.25
CTSH-218ENST00000615999 JPH4Q96JJ6 628 aa22.84■■□□□ 1.25
CTSH-218ENST00000615999 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
CTSH-218ENST00000615999 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
CTSH-218ENST00000615999 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
CTSH-218ENST00000615999 NPM1P06748 294 aaKnown RBP eCLIP22.76■■□□□ 1.23
CTSH-218ENST00000615999 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms