RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
CTNND1-215ENST00000526938 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
CTNND1-215ENST00000526938 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
CTNND1-215ENST00000526938 SUPT5HO00267 1087 aaKnown RBP15.29■□□□□ 0.04
CTNND1-215ENST00000526938 ZCCHC6Q5VYS8 1495 aaKnown RBP14.88□□□□□ -0.03
CTNND1-215ENST00000526938 CCDC180Q9P1Z9 1646 aa14.87□□□□□ -0.03
CTNND1-215ENST00000526938 ABCC9O60706 1549 aa14.62□□□□□ -0.07
CTNND1-215ENST00000526938 CHIC1Q5VXU3 224 aa14.44□□□□□ -0.1
CTNND1-215ENST00000526938 SCRIBQ14160 1630 aa14.33□□□□□ -0.12
CTNND1-215ENST00000526938 DCAF1Q9Y4B6 1507 aa14.32□□□□□ -0.12
CTNND1-215ENST00000526938 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
CTNND1-215ENST00000526938 FAM9AQ8IZU1 332 aaPredicted RBP14.23□□□□□ -0.13
CTNND1-215ENST00000526938 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
CTNND1-215ENST00000526938 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.144e-7■□□□□ 8.4
CTNND1-215ENST00000526938 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
CTNND1-215ENST00000526938 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
CTNND1-215ENST00000526938 RSF1Q96T23 1441 aaPredicted RBP14.08□□□□□ -0.16
CTNND1-215ENST00000526938 NACADO15069 1562 aa14.03□□□□□ -0.16
CTNND1-215ENST00000526938 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
CTNND1-215ENST00000526938 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.17
CTNND1-215ENST00000526938 RB1CC1Q8TDY2 1594 aa13.91□□□□□ -0.18
CTNND1-215ENST00000526938 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
CTNND1-215ENST00000526938 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
CTNND1-215ENST00000526938 TTBK1Q5TCY1 1321 aaPredicted RBP13.73□□□□□ -0.21
CTNND1-215ENST00000526938 WIZO95785 1651 aa13.71□□□□□ -0.21
CTNND1-215ENST00000526938 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
CTNND1-215ENST00000526938 RANGAP1P46060 587 aaPredicted RBP13.63□□□□□ -0.23
CTNND1-215ENST00000526938 UBTFP17480 764 aaKnown RBP13.62□□□□□ -0.23
CTNND1-215ENST00000526938 HRCP23327 699 aa13.6□□□□□ -0.23
CTNND1-215ENST00000526938 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
CTNND1-215ENST00000526938 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
CTNND1-215ENST00000526938 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
CTNND1-215ENST00000526938 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
CTNND1-215ENST00000526938 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
CTNND1-215ENST00000526938 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
CTNND1-215ENST00000526938 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
CTNND1-215ENST00000526938 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
CTNND1-215ENST00000526938 SOGA1O94964 1423 aa13.39□□□□□ -0.27
CTNND1-215ENST00000526938 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
CTNND1-215ENST00000526938 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
CTNND1-215ENST00000526938 ATAD2BQ9ULI0 1458 aa13.35□□□□□ -0.27
CTNND1-215ENST00000526938 WRNQ14191 1432 aaPredicted RBP eCLIP13.33□□□□□ -0.28
CTNND1-215ENST00000526938 APLP2Q06481 763 aa13.3□□□□□ -0.28
CTNND1-215ENST00000526938 RUSC2Q8N2Y8 1516 aa13.3□□□□□ -0.28
CTNND1-215ENST00000526938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
CTNND1-215ENST00000526938 CCER1Q8TC90 406 aaPredicted RBP13.28□□□□□ -0.28
CTNND1-215ENST00000526938 CEP162Q5TB80 1403 aa13.2□□□□□ -0.3
CTNND1-215ENST00000526938 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
CTNND1-215ENST00000526938 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
CTNND1-215ENST00000526938 ATP1B4Q9UN42 357 aaPredicted RBP13.15□□□□□ -0.3
CTNND1-215ENST00000526938 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
CTNND1-215ENST00000526938 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
CTNND1-215ENST00000526938 EEA1Q15075 1411 aa13.12□□□□□ -0.31
CTNND1-215ENST00000526938 GOLGA3Q08378 1498 aa13.1□□□□□ -0.31
CTNND1-215ENST00000526938 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
CTNND1-215ENST00000526938 SYNJ1O43426 1573 aa13.06□□□□□ -0.32
CTNND1-215ENST00000526938 CLIP1P30622 1438 aa13.06□□□□□ -0.32
CTNND1-215ENST00000526938 PEG3Q9GZU2 1588 aa13.06□□□□□ -0.32
CTNND1-215ENST00000526938 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
CTNND1-215ENST00000526938 ITGAEP38570 1179 aa13.05□□□□□ -0.32
CTNND1-215ENST00000526938 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
CTNND1-215ENST00000526938 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
CTNND1-215ENST00000526938 DNAJC5BQ9UF47 199 aa13□□□□□ -0.33
CTNND1-215ENST00000526938 CADPSQ9ULU8 1353 aa12.98□□□□□ -0.33
CTNND1-215ENST00000526938 KIF27Q86VH2 1401 aa12.96□□□□□ -0.33
CTNND1-215ENST00000526938 CUX2O14529 1486 aa12.92□□□□□ -0.34
CTNND1-215ENST00000526938 CFTRP13569 1480 aa12.91□□□□□ -0.34
CTNND1-215ENST00000526938 HMGXB3Q12766 1538 aa12.9□□□□□ -0.34
CTNND1-215ENST00000526938 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
CTNND1-215ENST00000526938 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
CTNND1-215ENST00000526938 CUX1P39880 1505 aa12.88□□□□□ -0.35
CTNND1-215ENST00000526938 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
CTNND1-215ENST00000526938 VPS8Q8N3P4 1428 aa12.86□□□□□ -0.35
CTNND1-215ENST00000526938 NESP48681 1621 aa12.85□□□□□ -0.35
CTNND1-215ENST00000526938 CARMIL1Q5VZK9 1371 aa12.85□□□□□ -0.35
CTNND1-215ENST00000526938 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
CTNND1-215ENST00000526938 FAM50AQ14320 339 aaKnown RBP12.82□□□□□ -0.36
CTNND1-215ENST00000526938 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
CTNND1-215ENST00000526938 IGF1RP08069 1367 aa12.82□□□□□ -0.36
CTNND1-215ENST00000526938 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
CTNND1-215ENST00000526938 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
CTNND1-215ENST00000526938 FGD5Q6ZNL6 1462 aa12.79□□□□□ -0.36
CTNND1-215ENST00000526938 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
CTNND1-215ENST00000526938 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
CTNND1-215ENST00000526938 PRXQ9BXM0 1461 aa12.77□□□□□ -0.36
CTNND1-215ENST00000526938 KIF21BO75037 1637 aa12.77□□□□□ -0.37
CTNND1-215ENST00000526938 FBLN2P98095 1184 aa12.73□□□□□ -0.37
CTNND1-215ENST00000526938 ARAP1Q96P48 1450 aa12.71□□□□□ -0.37
CTNND1-215ENST00000526938 YTHDC1Q96MU7 727 aaKnown RBP12.71□□□□□ -0.37
CTNND1-215ENST00000526938 BIVM-ERCC5R4GMW8 1640 aa12.68□□□□□ -0.38
CTNND1-215ENST00000526938 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
CTNND1-215ENST00000526938 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
CTNND1-215ENST00000526938 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
CTNND1-215ENST00000526938 ARHGAP35Q9NRY4 1499 aa12.65□□□□□ -0.38
CTNND1-215ENST00000526938 FHOD3Q2V2M9 1422 aa12.64□□□□□ -0.39
CTNND1-215ENST00000526938 POLA1P09884 1462 aaPredicted RBP12.64□□□□□ -0.39
CTNND1-215ENST00000526938 ERICH3Q5RHP9 1530 aa12.64□□□□□ -0.39
CTNND1-215ENST00000526938 TOPBP1Q92547 1522 aa12.63□□□□□ -0.39
CTNND1-215ENST00000526938 CCNB3Q8WWL7 1395 aa12.61□□□□□ -0.39
CTNND1-215ENST00000526938 MYT1Q01538 1121 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms