RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
CTNND1-210ENST00000524630 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
CTNND1-210ENST00000524630 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
CTNND1-210ENST00000524630 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
CTNND1-210ENST00000524630 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
CTNND1-210ENST00000524630 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
CTNND1-210ENST00000524630 PCGF6Q9BYE7 350 aa15.85■□□□□ 0.13
CTNND1-210ENST00000524630 APLP2Q06481 763 aa15.69■□□□□ 0.1
CTNND1-210ENST00000524630 CENPBP07199 599 aaPredicted RBP15.67■□□□□ 0.1
CTNND1-210ENST00000524630 MYT1Q01538 1121 aa15.66■□□□□ 0.1
CTNND1-210ENST00000524630 FAM9AQ8IZU1 332 aaPredicted RBP15.66■□□□□ 0.1
CTNND1-210ENST00000524630 TTBK1Q5TCY1 1321 aaPredicted RBP15.64■□□□□ 0.09
CTNND1-210ENST00000524630 ERICH6Q7L0X2 663 aa15.62■□□□□ 0.09
CTNND1-210ENST00000524630 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
CTNND1-210ENST00000524630 CCER1Q8TC90 406 aaPredicted RBP15.45■□□□□ 0.06
CTNND1-210ENST00000524630 YTHDC1Q96MU7 727 aaKnown RBP15.36■□□□□ 0.05
CTNND1-210ENST00000524630 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
CTNND1-210ENST00000524630 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
CTNND1-210ENST00000524630 HRCP23327 699 aa15.22■□□□□ 0.03
CTNND1-210ENST00000524630 NEFLP07196 543 aa15.19■□□□□ 0.02
CTNND1-210ENST00000524630 UBTFP17480 764 aaKnown RBP15.13■□□□□ 0.01
CTNND1-210ENST00000524630 TRIM26Q12899 539 aaPredicted RBP15.13■□□□□ 0.01
CTNND1-210ENST00000524630 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
CTNND1-210ENST00000524630 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
CTNND1-210ENST00000524630 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
CTNND1-210ENST00000524630 CHIC1Q5VXU3 224 aa14.81□□□□□ -0.04
CTNND1-210ENST00000524630 DAXXQ9UER7 740 aaPredicted RBP14.76□□□□□ -0.05
CTNND1-210ENST00000524630 ITGAEP38570 1179 aa14.73□□□□□ -0.05
CTNND1-210ENST00000524630 DIEXFQ68CQ4 756 aaKnown RBP14.72□□□□□ -0.05
CTNND1-210ENST00000524630 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
CTNND1-210ENST00000524630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
CTNND1-210ENST00000524630 GTF3C3Q9Y5Q9 886 aa14.65□□□□□ -0.06
CTNND1-210ENST00000524630 POLR3GLQ9BT43 218 aa14.63□□□□□ -0.07
CTNND1-210ENST00000524630 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.07
CTNND1-210ENST00000524630 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.08
CTNND1-210ENST00000524630 BCANQ96GW7 911 aa14.48□□□□□ -0.09
CTNND1-210ENST00000524630 ZNF316A6NFI3 1004 aaPredicted RBP14.47□□□□□ -0.09
CTNND1-210ENST00000524630 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
CTNND1-210ENST00000524630 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
CTNND1-210ENST00000524630 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
CTNND1-210ENST00000524630 CDK11AQ9UQ88 783 aaPredicted RBP14.35□□□□□ -0.11
CTNND1-210ENST00000524630 NEUROD1Q13562 356 aa14.31□□□□□ -0.12
CTNND1-210ENST00000524630 CLSPNQ9HAW4 1339 aa14.31□□□□□ -0.12
CTNND1-210ENST00000524630 ANP32CO43423 234 aa14.25□□□□□ -0.13
CTNND1-210ENST00000524630 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
CTNND1-210ENST00000524630 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
CTNND1-210ENST00000524630 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
CTNND1-210ENST00000524630 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
CTNND1-210ENST00000524630 ANP32AP39687 249 aaKnown RBP14.09□□□□□ -0.15
CTNND1-210ENST00000524630 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
CTNND1-210ENST00000524630 FKBP8Q14318 412 aa14.05□□□□□ -0.16
CTNND1-210ENST00000524630 EIF5BO60841 1220 aaKnown RBP14.05□□□□□ -0.16
CTNND1-210ENST00000524630 ABCC9O60706 1549 aa14.04□□□□□ -0.16
CTNND1-210ENST00000524630 NPM2Q86SE8 214 aaKnown RBP14.03□□□□□ -0.16
CTNND1-210ENST00000524630 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.174e-7■□□□□ 8.4
CTNND1-210ENST00000524630 CANXP27824 592 aaKnown RBP13.95□□□□□ -0.18
CTNND1-210ENST00000524630 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
CTNND1-210ENST00000524630 NBR1Q14596 966 aa13.92□□□□□ -0.18
CTNND1-210ENST00000524630 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
CTNND1-210ENST00000524630 ZBTB47Q9UFB7 747 aaPredicted RBP13.9□□□□□ -0.18
CTNND1-210ENST00000524630 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
CTNND1-210ENST00000524630 GLIPR1L2Q4G1C9 344 aa13.86□□□□□ -0.19
CTNND1-210ENST00000524630 BCL11AQ9H165 835 aa13.85□□□□□ -0.19
CTNND1-210ENST00000524630 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
CTNND1-210ENST00000524630 HNRNPUQ00839 825 aaKnown RBP eCLIP13.82□□□□□ -0.2
CTNND1-210ENST00000524630 DDX10Q13206 875 aaKnown RBP13.82□□□□□ -0.2
CTNND1-210ENST00000524630 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
CTNND1-210ENST00000524630 ZCCHC6Q5VYS8 1495 aaKnown RBP13.81□□□□□ -0.2
CTNND1-210ENST00000524630 ARID3CA6NKF2 412 aa13.81□□□□□ -0.2
CTNND1-210ENST00000524630 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
CTNND1-210ENST00000524630 MIER1Q8N108 512 aa13.78□□□□□ -0.2
CTNND1-210ENST00000524630 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
CTNND1-210ENST00000524630 ANP32BQ92688 251 aaKnown RBP13.77□□□□□ -0.21
CTNND1-210ENST00000524630 ANP32EQ9BTT0 268 aa13.75□□□□□ -0.21
CTNND1-210ENST00000524630 FBLN2P98095 1184 aa13.74□□□□□ -0.21
CTNND1-210ENST00000524630 ZNF777Q9ULD5 760 aaPredicted RBP13.73□□□□□ -0.21
CTNND1-210ENST00000524630 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
CTNND1-210ENST00000524630 NEFMP07197 916 aa13.72□□□□□ -0.21
CTNND1-210ENST00000524630 IRX6P78412 446 aaPredicted RBP13.7□□□□□ -0.22
CTNND1-210ENST00000524630 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
CTNND1-210ENST00000524630 ARXQ96QS3 562 aa13.68□□□□□ -0.22
CTNND1-210ENST00000524630 SALL2Q9Y467 1007 aaPredicted RBP13.67□□□□□ -0.22
CTNND1-210ENST00000524630 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
CTNND1-210ENST00000524630 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
CTNND1-210ENST00000524630 TMC1Q8TDI8 760 aa13.61□□□□□ -0.23
CTNND1-210ENST00000524630 HIRIP3Q9BW71 556 aaPredicted RBP13.6□□□□□ -0.23
CTNND1-210ENST00000524630 MRS2Q9HD23 443 aa13.59□□□□□ -0.23
CTNND1-210ENST00000524630 CHIC2Q9UKJ5 165 aa13.58□□□□□ -0.24
CTNND1-210ENST00000524630 CLIP1P30622 1438 aa13.56□□□□□ -0.24
CTNND1-210ENST00000524630 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.55□□□□□ -0.24
CTNND1-210ENST00000524630 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
CTNND1-210ENST00000524630 DDRGK1Q96HY6 314 aa13.53□□□□□ -0.24
CTNND1-210ENST00000524630 WDR43Q15061 677 aaKnown RBP eCLIP13.52□□□□□ -0.243e-9■■■□□ 15.6
CTNND1-210ENST00000524630 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
CTNND1-210ENST00000524630 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
CTNND1-210ENST00000524630 CHGAP10645 457 aaKnown RBP13.49□□□□□ -0.25
CTNND1-210ENST00000524630 SUPT16HQ9Y5B9 1047 aaKnown RBP13.48□□□□□ -0.25
CTNND1-210ENST00000524630 KDM2AQ9Y2K7 1162 aa13.48□□□□□ -0.25
CTNND1-210ENST00000524630 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
CTNND1-210ENST00000524630 EIF4G2P78344 907 aaKnown RBP eCLIP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms