RNA–Protein interactions for RNA: ENST00000592224.5

SAFB-211, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 3,014 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-211ENST00000592224 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
SAFB-211ENST00000592224 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
SAFB-211ENST00000592224 DCAF8L2P0C7V8 631 aa24.39■■□□□ 1.5
SAFB-211ENST00000592224 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
SAFB-211ENST00000592224 CCDC180Q9P1Z9 1646 aa23.85■■□□□ 1.41
SAFB-211ENST00000592224 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.39
SAFB-211ENST00000592224 HRCP23327 699 aa23.46■■□□□ 1.35
SAFB-211ENST00000592224 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
SAFB-211ENST00000592224 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
SAFB-211ENST00000592224 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
SAFB-211ENST00000592224 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
SAFB-211ENST00000592224 ABCC9O60706 1549 aa23.2■■□□□ 1.3
SAFB-211ENST00000592224 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
SAFB-211ENST00000592224 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
SAFB-211ENST00000592224 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
SAFB-211ENST00000592224 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
SAFB-211ENST00000592224 EHMT2Q96KQ7 1210 aa22.39■■□□□ 1.17
SAFB-211ENST00000592224 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.172e-11■□□□□ 8.5
SAFB-211ENST00000592224 NACADO15069 1562 aa22.33■■□□□ 1.16
SAFB-211ENST00000592224 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
SAFB-211ENST00000592224 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
SAFB-211ENST00000592224 FAM9AQ8IZU1 332 aaPredicted RBP22.29■■□□□ 1.16
SAFB-211ENST00000592224 RB1CC1Q8TDY2 1594 aa22.17■■□□□ 1.14
SAFB-211ENST00000592224 SCAF1Q9H7N4 1312 aaKnown RBP22.14■■□□□ 1.13
SAFB-211ENST00000592224 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
SAFB-211ENST00000592224 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
SAFB-211ENST00000592224 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
SAFB-211ENST00000592224 WIZO95785 1651 aa21.9■■□□□ 1.1
SAFB-211ENST00000592224 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.09
SAFB-211ENST00000592224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
SAFB-211ENST00000592224 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
SAFB-211ENST00000592224 TTBK1Q5TCY1 1321 aaPredicted RBP21.74■■□□□ 1.07
SAFB-211ENST00000592224 NEUROD1Q13562 356 aa21.67■■□□□ 1.06
SAFB-211ENST00000592224 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
SAFB-211ENST00000592224 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
SAFB-211ENST00000592224 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
SAFB-211ENST00000592224 ACIN1Q9UKV3 1341 aaKnown RBP21.58■■□□□ 1.05
SAFB-211ENST00000592224 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
SAFB-211ENST00000592224 GTF3C3Q9Y5Q9 886 aa21.52■■□□□ 1.04
SAFB-211ENST00000592224 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
SAFB-211ENST00000592224 DIEXFQ68CQ4 756 aaKnown RBP21.47■■□□□ 1.03
SAFB-211ENST00000592224 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
SAFB-211ENST00000592224 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
SAFB-211ENST00000592224 YTHDC1Q96MU7 727 aaKnown RBP21.33■■□□□ 1
SAFB-211ENST00000592224 SMARCA2P51531 1590 aa21.3■■□□□ 1
SAFB-211ENST00000592224 CENPBP07199 599 aaPredicted RBP21.29■■□□□ 1
SAFB-211ENST00000592224 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
SAFB-211ENST00000592224 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
SAFB-211ENST00000592224 SOGA1O94964 1423 aa21.16■□□□□ 0.98
SAFB-211ENST00000592224 RANGAP1P46060 587 aaPredicted RBP21.15■□□□□ 0.98
SAFB-211ENST00000592224 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
SAFB-211ENST00000592224 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
SAFB-211ENST00000592224 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.96
SAFB-211ENST00000592224 ZNF316A6NFI3 1004 aaPredicted RBP21.06■□□□□ 0.96
SAFB-211ENST00000592224 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
SAFB-211ENST00000592224 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
SAFB-211ENST00000592224 MIER1Q8N108 512 aa21.02■□□□□ 0.96
SAFB-211ENST00000592224 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
SAFB-211ENST00000592224 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
SAFB-211ENST00000592224 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
SAFB-211ENST00000592224 SYNJ1O43426 1573 aa20.83■□□□□ 0.93
SAFB-211ENST00000592224 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
SAFB-211ENST00000592224 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
SAFB-211ENST00000592224 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
SAFB-211ENST00000592224 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
SAFB-211ENST00000592224 MYT1Q01538 1121 aa20.75■□□□□ 0.91
SAFB-211ENST00000592224 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
SAFB-211ENST00000592224 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
SAFB-211ENST00000592224 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.89
SAFB-211ENST00000592224 APLP2Q06481 763 aa20.56■□□□□ 0.88
SAFB-211ENST00000592224 EEA1Q15075 1411 aa20.54■□□□□ 0.88
SAFB-211ENST00000592224 CFTRP13569 1480 aa20.53■□□□□ 0.88
SAFB-211ENST00000592224 CUX1P39880 1505 aa20.52■□□□□ 0.88
SAFB-211ENST00000592224 CLIP1P30622 1438 aa20.52■□□□□ 0.88
SAFB-211ENST00000592224 CADPSQ9ULU8 1353 aa20.51■□□□□ 0.87
SAFB-211ENST00000592224 NESP48681 1621 aa20.51■□□□□ 0.87
SAFB-211ENST00000592224 SUPT16HQ9Y5B9 1047 aaKnown RBP20.48■□□□□ 0.87
SAFB-211ENST00000592224 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
SAFB-211ENST00000592224 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
SAFB-211ENST00000592224 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
SAFB-211ENST00000592224 VPS8Q8N3P4 1428 aa20.39■□□□□ 0.85
SAFB-211ENST00000592224 P3H3Q8IVL6 736 aa20.38■□□□□ 0.85
SAFB-211ENST00000592224 ITGAEP38570 1179 aa20.37■□□□□ 0.85
SAFB-211ENST00000592224 BCANQ96GW7 911 aa20.36■□□□□ 0.85
SAFB-211ENST00000592224 CUX2O14529 1486 aa20.36■□□□□ 0.85
SAFB-211ENST00000592224 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
SAFB-211ENST00000592224 KANK4Q5T7N3 995 aaPredicted RBP20.33■□□□□ 0.84
SAFB-211ENST00000592224 DHX57Q6P158 1386 aaKnown RBP20.32■□□□□ 0.84
SAFB-211ENST00000592224 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
SAFB-211ENST00000592224 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
SAFB-211ENST00000592224 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
SAFB-211ENST00000592224 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
SAFB-211ENST00000592224 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
SAFB-211ENST00000592224 BIVM-ERCC5R4GMW8 1640 aa20.28■□□□□ 0.84
SAFB-211ENST00000592224 KIF21BO75037 1637 aa20.26■□□□□ 0.83
SAFB-211ENST00000592224 IGF1RP08069 1367 aa20.25■□□□□ 0.83
SAFB-211ENST00000592224 PRXQ9BXM0 1461 aa20.23■□□□□ 0.83
SAFB-211ENST00000592224 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
SAFB-211ENST00000592224 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
SAFB-211ENST00000592224 ARAP1Q96P48 1450 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms