RNA–Protein interactions for RNA: ENST00000533777.5

CTSH-213, Transcript of cathepsin H, humanhuman

TSL 1 (best)

Gene CTSH, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-213ENST00000533777 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.45
CTSH-213ENST00000533777 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
CTSH-213ENST00000533777 ZCCHC6Q5VYS8 1495 aaKnown RBP30.96■■■□□ 2.55
CTSH-213ENST00000533777 SHROOM4Q9ULL8 1493 aa30.84■■■□□ 2.53
CTSH-213ENST00000533777 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.44
CTSH-213ENST00000533777 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
CTSH-213ENST00000533777 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
CTSH-213ENST00000533777 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
CTSH-213ENST00000533777 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
CTSH-213ENST00000533777 ABCC9O60706 1549 aa29.22■■■□□ 2.27
CTSH-213ENST00000533777 SCRIBQ14160 1630 aa29.04■■■□□ 2.24
CTSH-213ENST00000533777 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
CTSH-213ENST00000533777 NACADO15069 1562 aa28.85■■■□□ 2.21
CTSH-213ENST00000533777 RB1CC1Q8TDY2 1594 aa28.64■■■□□ 2.18
CTSH-213ENST00000533777 HRCP23327 699 aa28.63■■■□□ 2.17
CTSH-213ENST00000533777 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
CTSH-213ENST00000533777 PCGF6Q9BYE7 350 aa28.51■■■□□ 2.15
CTSH-213ENST00000533777 CECR2Q9BXF3 1484 aa28.4■■■□□ 2.14
CTSH-213ENST00000533777 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
CTSH-213ENST00000533777 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
CTSH-213ENST00000533777 WIZO95785 1651 aa28.21■■■□□ 2.11
CTSH-213ENST00000533777 BAZ1AQ9NRL2 1556 aaPredicted RBP28.14■■■□□ 2.1
CTSH-213ENST00000533777 TRIM26Q12899 539 aaPredicted RBP28.13■■■□□ 2.09
CTSH-213ENST00000533777 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
CTSH-213ENST00000533777 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
CTSH-213ENST00000533777 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
CTSH-213ENST00000533777 SMARCA4P51532 1647 aa27.87■■■□□ 2.05
CTSH-213ENST00000533777 TOP2AP11388 1531 aaKnown RBP27.86■■■□□ 2.05
CTSH-213ENST00000533777 PPARGC1BQ86YN6 1023 aaKnown RBP27.83■■■□□ 2.05
CTSH-213ENST00000533777 SMARCA2P51531 1590 aa27.68■■■□□ 2.02
CTSH-213ENST00000533777 CCDC88BA6NC98 1476 aa27.66■■■□□ 2.02
CTSH-213ENST00000533777 ZEB1P37275 1124 aaPredicted RBP27.6■■■□□ 2.01
CTSH-213ENST00000533777 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
CTSH-213ENST00000533777 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
CTSH-213ENST00000533777 ABCC8Q09428 1581 aa27.51■■□□□ 1.99
CTSH-213ENST00000533777 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
CTSH-213ENST00000533777 EEA1Q15075 1411 aa27.31■■□□□ 1.96
CTSH-213ENST00000533777 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.964e-7■□□□□ 8.4
CTSH-213ENST00000533777 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
CTSH-213ENST00000533777 SOGA1O94964 1423 aa27.24■■□□□ 1.95
CTSH-213ENST00000533777 TNIKQ9UKE5 1360 aa27.2■■□□□ 1.94
CTSH-213ENST00000533777 CEP162Q5TB80 1403 aa27.16■■□□□ 1.94
CTSH-213ENST00000533777 CSRNP3Q8WYN3 585 aa27.13■■□□□ 1.93
CTSH-213ENST00000533777 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
CTSH-213ENST00000533777 RUSC2Q8N2Y8 1516 aa27.09■■□□□ 1.93
CTSH-213ENST00000533777 GOLGA3Q08378 1498 aa27.04■■□□□ 1.92
CTSH-213ENST00000533777 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
CTSH-213ENST00000533777 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
CTSH-213ENST00000533777 KIF21BO75037 1637 aa26.93■■□□□ 1.9
CTSH-213ENST00000533777 UBTFP17480 764 aaKnown RBP26.93■■□□□ 1.9
CTSH-213ENST00000533777 CEP164Q9UPV0 1460 aa26.91■■□□□ 1.9
CTSH-213ENST00000533777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.86■■□□□ 1.89
CTSH-213ENST00000533777 CCER1Q8TC90 406 aaPredicted RBP26.85■■□□□ 1.89
CTSH-213ENST00000533777 TOP2BQ02880 1626 aa26.75■■□□□ 1.87
CTSH-213ENST00000533777 BIVM-ERCC5R4GMW8 1640 aa26.69■■□□□ 1.86
CTSH-213ENST00000533777 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
CTSH-213ENST00000533777 TTBK1Q5TCY1 1321 aaPredicted RBP26.67■■□□□ 1.86
CTSH-213ENST00000533777 CLIP1P30622 1438 aa26.67■■□□□ 1.86
CTSH-213ENST00000533777 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
CTSH-213ENST00000533777 RAPGEF2Q9Y4G8 1499 aa26.61■■□□□ 1.85
CTSH-213ENST00000533777 VPS8Q8N3P4 1428 aa26.6■■□□□ 1.85
CTSH-213ENST00000533777 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
CTSH-213ENST00000533777 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
CTSH-213ENST00000533777 CUX1P39880 1505 aa26.42■■□□□ 1.82
CTSH-213ENST00000533777 CFTRP13569 1480 aa26.41■■□□□ 1.82
CTSH-213ENST00000533777 APLP2Q06481 763 aa26.39■■□□□ 1.81
CTSH-213ENST00000533777 DIEXFQ68CQ4 756 aaKnown RBP26.33■■□□□ 1.81
CTSH-213ENST00000533777 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
CTSH-213ENST00000533777 KIF27Q86VH2 1401 aa26.32■■□□□ 1.8
CTSH-213ENST00000533777 ARAP1Q96P48 1450 aa26.26■■□□□ 1.79
CTSH-213ENST00000533777 SCAF1Q9H7N4 1312 aaKnown RBP26.26■■□□□ 1.79
CTSH-213ENST00000533777 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
CTSH-213ENST00000533777 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.79
CTSH-213ENST00000533777 ZNF316A6NFI3 1004 aaPredicted RBP26.2■■□□□ 1.78
CTSH-213ENST00000533777 ACIN1Q9UKV3 1341 aaKnown RBP26.13■■□□□ 1.77
CTSH-213ENST00000533777 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
CTSH-213ENST00000533777 ARHGAP35Q9NRY4 1499 aa26.05■■□□□ 1.76
CTSH-213ENST00000533777 CENPBP07199 599 aaPredicted RBP26.03■■□□□ 1.76
CTSH-213ENST00000533777 CLSPNQ9HAW4 1339 aa26.03■■□□□ 1.76
CTSH-213ENST00000533777 NEUROD1Q13562 356 aa26.01■■□□□ 1.75
CTSH-213ENST00000533777 RRBP1Q9P2E9 1410 aaKnown RBP26.01■■□□□ 1.75
CTSH-213ENST00000533777 CUX2O14529 1486 aa26■■□□□ 1.75
CTSH-213ENST00000533777 KANK4Q5T7N3 995 aaPredicted RBP26■■□□□ 1.75
CTSH-213ENST00000533777 IGF1RP08069 1367 aa25.99■■□□□ 1.75
CTSH-213ENST00000533777 FGD5Q6ZNL6 1462 aa25.94■■□□□ 1.74
CTSH-213ENST00000533777 DHX57Q6P158 1386 aaKnown RBP25.91■■□□□ 1.74
CTSH-213ENST00000533777 CC2D2AQ9P2K1 1620 aa25.91■■□□□ 1.74
CTSH-213ENST00000533777 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
CTSH-213ENST00000533777 PELP1Q8IZL8 1130 aaKnown RBP25.88■■□□□ 1.73
CTSH-213ENST00000533777 CARMIL1Q5VZK9 1371 aa25.88■■□□□ 1.73
CTSH-213ENST00000533777 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
CTSH-213ENST00000533777 TIAM1Q13009 1591 aa25.81■■□□□ 1.72
CTSH-213ENST00000533777 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
CTSH-213ENST00000533777 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
CTSH-213ENST00000533777 GTF3C3Q9Y5Q9 886 aa25.75■■□□□ 1.71
CTSH-213ENST00000533777 MIER1Q8N108 512 aa25.73■■□□□ 1.71
CTSH-213ENST00000533777 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
CTSH-213ENST00000533777 ABCA10Q8WWZ4 1543 aa25.71■■□□□ 1.71
CTSH-213ENST00000533777 LRRC9Q6ZRR7 1453 aa25.68■■□□□ 1.7
CTSH-213ENST00000533777 CFAP43Q8NDM7 1665 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms