RNA–Protein interactions for RNA: ENST00000527715.5

CTSH-204, Transcript of cathepsin H, humanhuman

TSL 1 (best)

Gene CTSH, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-204ENST00000527715 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
CTSH-204ENST00000527715 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
CTSH-204ENST00000527715 ABCC9O60706 1549 aa21.73■■□□□ 1.07
CTSH-204ENST00000527715 ZCCHC6Q5VYS8 1495 aaKnown RBP21.35■■□□□ 1.01
CTSH-204ENST00000527715 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
CTSH-204ENST00000527715 DCAF1Q9Y4B6 1507 aa21.1■□□□□ 0.97
CTSH-204ENST00000527715 NACADO15069 1562 aa21.08■□□□□ 0.97
CTSH-204ENST00000527715 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
CTSH-204ENST00000527715 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
CTSH-204ENST00000527715 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
CTSH-204ENST00000527715 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
CTSH-204ENST00000527715 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
CTSH-204ENST00000527715 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.854e-7■□□□□ 8.4
CTSH-204ENST00000527715 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
CTSH-204ENST00000527715 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
CTSH-204ENST00000527715 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
CTSH-204ENST00000527715 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
CTSH-204ENST00000527715 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
CTSH-204ENST00000527715 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
CTSH-204ENST00000527715 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
CTSH-204ENST00000527715 CC2D2AQ9P2K1 1620 aa19.65■□□□□ 0.74
CTSH-204ENST00000527715 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
CTSH-204ENST00000527715 RSF1Q96T23 1441 aaPredicted RBP19.6■□□□□ 0.73
CTSH-204ENST00000527715 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.73
CTSH-204ENST00000527715 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
CTSH-204ENST00000527715 SMARCA2P51531 1590 aa19.52■□□□□ 0.72
CTSH-204ENST00000527715 WIZO95785 1651 aa19.51■□□□□ 0.71
CTSH-204ENST00000527715 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
CTSH-204ENST00000527715 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
CTSH-204ENST00000527715 HRCP23327 699 aa19.43■□□□□ 0.7
CTSH-204ENST00000527715 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
CTSH-204ENST00000527715 HMGXB3Q12766 1538 aa19.39■□□□□ 0.69
CTSH-204ENST00000527715 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
CTSH-204ENST00000527715 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
CTSH-204ENST00000527715 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
CTSH-204ENST00000527715 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
CTSH-204ENST00000527715 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
CTSH-204ENST00000527715 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
CTSH-204ENST00000527715 NESP48681 1621 aa18.91■□□□□ 0.62
CTSH-204ENST00000527715 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
CTSH-204ENST00000527715 CFTRP13569 1480 aa18.87■□□□□ 0.61
CTSH-204ENST00000527715 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
CTSH-204ENST00000527715 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
CTSH-204ENST00000527715 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
CTSH-204ENST00000527715 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
CTSH-204ENST00000527715 ERCC6Q03468 1493 aa18.7■□□□□ 0.58
CTSH-204ENST00000527715 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
CTSH-204ENST00000527715 CEP164Q9UPV0 1460 aa18.66■□□□□ 0.58
CTSH-204ENST00000527715 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
CTSH-204ENST00000527715 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
CTSH-204ENST00000527715 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
CTSH-204ENST00000527715 ABCC8Q09428 1581 aa18.53■□□□□ 0.56
CTSH-204ENST00000527715 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.55
CTSH-204ENST00000527715 URB2Q14146 1524 aaKnown RBP18.51■□□□□ 0.55
CTSH-204ENST00000527715 FAM9AQ8IZU1 332 aaPredicted RBP18.5■□□□□ 0.55
CTSH-204ENST00000527715 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
CTSH-204ENST00000527715 WDR62O43379 1518 aa18.46■□□□□ 0.55
CTSH-204ENST00000527715 CUX1P39880 1505 aa18.46■□□□□ 0.55
CTSH-204ENST00000527715 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
CTSH-204ENST00000527715 TOPBP1Q92547 1522 aa18.46■□□□□ 0.54
CTSH-204ENST00000527715 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
CTSH-204ENST00000527715 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
CTSH-204ENST00000527715 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
CTSH-204ENST00000527715 BIVM-ERCC5R4GMW8 1640 aa18.37■□□□□ 0.53
CTSH-204ENST00000527715 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
CTSH-204ENST00000527715 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
CTSH-204ENST00000527715 CUX2O14529 1486 aa18.32■□□□□ 0.52
CTSH-204ENST00000527715 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
CTSH-204ENST00000527715 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
CTSH-204ENST00000527715 SOGA1O94964 1423 aa18.25■□□□□ 0.51
CTSH-204ENST00000527715 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
CTSH-204ENST00000527715 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
CTSH-204ENST00000527715 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
CTSH-204ENST00000527715 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
CTSH-204ENST00000527715 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.5
CTSH-204ENST00000527715 TDRD9Q8NDG6 1382 aaKnown RBP18.13■□□□□ 0.49
CTSH-204ENST00000527715 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.492e-7■■■■■ 32.4
CTSH-204ENST00000527715 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.49
CTSH-204ENST00000527715 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
CTSH-204ENST00000527715 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
CTSH-204ENST00000527715 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
CTSH-204ENST00000527715 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
CTSH-204ENST00000527715 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
CTSH-204ENST00000527715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.47
CTSH-204ENST00000527715 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
CTSH-204ENST00000527715 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
CTSH-204ENST00000527715 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
CTSH-204ENST00000527715 EEA1Q15075 1411 aa17.95■□□□□ 0.46
CTSH-204ENST00000527715 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
CTSH-204ENST00000527715 SNAPC4Q5SXM2 1469 aa17.94■□□□□ 0.46
CTSH-204ENST00000527715 IGF1RP08069 1367 aa17.93■□□□□ 0.46
CTSH-204ENST00000527715 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
CTSH-204ENST00000527715 CEP162Q5TB80 1403 aa17.89■□□□□ 0.45
CTSH-204ENST00000527715 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
CTSH-204ENST00000527715 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
CTSH-204ENST00000527715 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
CTSH-204ENST00000527715 CUL7Q14999 1698 aa17.86■□□□□ 0.45
CTSH-204ENST00000527715 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
CTSH-204ENST00000527715 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
CTSH-204ENST00000527715 FBLN2P98095 1184 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms