RNA–Protein interactions for RNA: ENST00000585835.1

ILF3-204, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 3

Gene ILF3, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-204ENST00000585835 NISCHQ9Y2I1 1504 aa34.02■■■■□ 3.04
ILF3-204ENST00000585835 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
ILF3-204ENST00000585835 ABCC9O60706 1549 aa30.27■■■□□ 2.44
ILF3-204ENST00000585835 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
ILF3-204ENST00000585835 NACADO15069 1562 aa28.79■■■□□ 2.2
ILF3-204ENST00000585835 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
ILF3-204ENST00000585835 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
ILF3-204ENST00000585835 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
ILF3-204ENST00000585835 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
ILF3-204ENST00000585835 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.15e-10■□□□□ 8.4
ILF3-204ENST00000585835 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
ILF3-204ENST00000585835 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
ILF3-204ENST00000585835 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
ILF3-204ENST00000585835 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
ILF3-204ENST00000585835 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.04
ILF3-204ENST00000585835 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
ILF3-204ENST00000585835 EIF4G1Q04637 1599 aaKnown RBP27.37■■□□□ 1.97
ILF3-204ENST00000585835 CECR2Q9BXF3 1484 aa27.27■■□□□ 1.96
ILF3-204ENST00000585835 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
ILF3-204ENST00000585835 NCAPD3P42695 1498 aa26.52■■□□□ 1.84
ILF3-204ENST00000585835 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
ILF3-204ENST00000585835 ATAD2BQ9ULI0 1458 aa26.47■■□□□ 1.83
ILF3-204ENST00000585835 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
ILF3-204ENST00000585835 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
ILF3-204ENST00000585835 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
ILF3-204ENST00000585835 PEG3Q9GZU2 1588 aa26.27■■□□□ 1.8
ILF3-204ENST00000585835 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
ILF3-204ENST00000585835 ERCC6Q03468 1493 aa26.18■■□□□ 1.78
ILF3-204ENST00000585835 CUX2O14529 1486 aa26.06■■□□□ 1.76
ILF3-204ENST00000585835 NESP48681 1621 aa26.03■■□□□ 1.76
ILF3-204ENST00000585835 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
ILF3-204ENST00000585835 WIZO95785 1651 aa25.93■■□□□ 1.74
ILF3-204ENST00000585835 THOC2Q8NI27 1593 aaKnown RBP25.8■■□□□ 1.72
ILF3-204ENST00000585835 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
ILF3-204ENST00000585835 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
ILF3-204ENST00000585835 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
ILF3-204ENST00000585835 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
ILF3-204ENST00000585835 RSF1Q96T23 1441 aaPredicted RBP25.7■■□□□ 1.7
ILF3-204ENST00000585835 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
ILF3-204ENST00000585835 MRC2Q9UBG0 1479 aa25.55■■□□□ 1.68
ILF3-204ENST00000585835 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
ILF3-204ENST00000585835 WDR62O43379 1518 aa25.48■■□□□ 1.67
ILF3-204ENST00000585835 CFTRP13569 1480 aa25.47■■□□□ 1.67
ILF3-204ENST00000585835 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
ILF3-204ENST00000585835 PRDM2Q13029 1718 aa25.39■■□□□ 1.65
ILF3-204ENST00000585835 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
ILF3-204ENST00000585835 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
ILF3-204ENST00000585835 TOPBP1Q92547 1522 aa25■■□□□ 1.59
ILF3-204ENST00000585835 ABCC8Q09428 1581 aa25■■□□□ 1.59
ILF3-204ENST00000585835 IFT140Q96RY7 1462 aa24.97■■□□□ 1.59
ILF3-204ENST00000585835 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
ILF3-204ENST00000585835 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
ILF3-204ENST00000585835 ZNF608Q9ULD9 1512 aaPredicted RBP24.86■■□□□ 1.57
ILF3-204ENST00000585835 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
ILF3-204ENST00000585835 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
ILF3-204ENST00000585835 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
ILF3-204ENST00000585835 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
ILF3-204ENST00000585835 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
ILF3-204ENST00000585835 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.546e-9■■■■□ 19.5
ILF3-204ENST00000585835 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
ILF3-204ENST00000585835 RAD54L2Q9Y4B4 1467 aa24.63■■□□□ 1.53
ILF3-204ENST00000585835 SOGA1O94964 1423 aa24.62■■□□□ 1.53
ILF3-204ENST00000585835 CHD1O14646 1710 aa24.62■■□□□ 1.53
ILF3-204ENST00000585835 CUX1P39880 1505 aa24.61■■□□□ 1.53
ILF3-204ENST00000585835 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
ILF3-204ENST00000585835 RIMBP3CA6NJZ7 1639 aa24.57■■□□□ 1.52
ILF3-204ENST00000585835 RIMBP3BA6NNM3 1639 aa24.57■■□□□ 1.52
ILF3-204ENST00000585835 RIMBP3Q9UFD9 1639 aa24.57■■□□□ 1.52
ILF3-204ENST00000585835 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
ILF3-204ENST00000585835 FBLN2P98095 1184 aa24.49■■□□□ 1.51
ILF3-204ENST00000585835 ARHGEF11O15085 1522 aa24.49■■□□□ 1.51
ILF3-204ENST00000585835 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.51
ILF3-204ENST00000585835 MAGI1Q96QZ7 1491 aaPredicted RBP24.43■■□□□ 1.5
ILF3-204ENST00000585835 GRIN2BQ13224 1484 aa24.42■■□□□ 1.5
ILF3-204ENST00000585835 PBRM1Q86U86 1689 aa24.41■■□□□ 1.5
ILF3-204ENST00000585835 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
ILF3-204ENST00000585835 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
ILF3-204ENST00000585835 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
ILF3-204ENST00000585835 CHMP7Q8WUX9 453 aaPredicted RBP24.34■■□□□ 1.49
ILF3-204ENST00000585835 ABCA5Q8WWZ7 1642 aa24.33■■□□□ 1.49
ILF3-204ENST00000585835 BIVM-ERCC5R4GMW8 1640 aa24.32■■□□□ 1.48
ILF3-204ENST00000585835 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
ILF3-204ENST00000585835 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
ILF3-204ENST00000585835 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
ILF3-204ENST00000585835 CLASP1Q7Z460 1538 aa24.28■■□□□ 1.48
ILF3-204ENST00000585835 CYB5RLQ6IPT4 315 aa24.25■■□□□ 1.47
ILF3-204ENST00000585835 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
ILF3-204ENST00000585835 ADAMTS12P58397 1594 aa24.15■■□□□ 1.46
ILF3-204ENST00000585835 GRIN2AQ12879 1464 aa24.11■■□□□ 1.45
ILF3-204ENST00000585835 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
ILF3-204ENST00000585835 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
ILF3-204ENST00000585835 CEP170Q5SW79 1584 aa24■■□□□ 1.43
ILF3-204ENST00000585835 NUP160Q12769 1436 aa24■■□□□ 1.43
ILF3-204ENST00000585835 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
ILF3-204ENST00000585835 SHROOM2Q13796 1616 aa23.91■■□□□ 1.42
ILF3-204ENST00000585835 ERCC6L2Q5T890 1561 aa23.87■■□□□ 1.41
ILF3-204ENST00000585835 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
ILF3-204ENST00000585835 CUL7Q14999 1698 aa23.81■■□□□ 1.4
ILF3-204ENST00000585835 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
ILF3-204ENST00000585835 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms