RNA–Protein interactions for RNA: ENST00000461389.1

PTK7-207, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-207ENST00000461389 NISCHQ9Y2I1 1504 aa35.09■■■■□ 3.21
PTK7-207ENST00000461389 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
PTK7-207ENST00000461389 ABCC9O60706 1549 aa30.44■■■□□ 2.46
PTK7-207ENST00000461389 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
PTK7-207ENST00000461389 NACADO15069 1562 aa29.41■■■□□ 2.3
PTK7-207ENST00000461389 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
PTK7-207ENST00000461389 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
PTK7-207ENST00000461389 DCAF8L2P0C7V8 631 aa29.21■■■□□ 2.27
PTK7-207ENST00000461389 DCAF1Q9Y4B6 1507 aa29.13■■■□□ 2.25
PTK7-207ENST00000461389 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
PTK7-207ENST00000461389 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
PTK7-207ENST00000461389 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
PTK7-207ENST00000461389 PABPN1Q86U42 306 aaKnown RBP eCLIP28.37■■■□□ 2.132e-7■□□□□ 8.5
PTK7-207ENST00000461389 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
PTK7-207ENST00000461389 DNAJC5BQ9UF47 199 aa27.78■■■□□ 2.04
PTK7-207ENST00000461389 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
PTK7-207ENST00000461389 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
PTK7-207ENST00000461389 CECR2Q9BXF3 1484 aa27.41■■□□□ 1.98
PTK7-207ENST00000461389 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
PTK7-207ENST00000461389 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
PTK7-207ENST00000461389 SMARCA2P51531 1590 aa27.14■■□□□ 1.93
PTK7-207ENST00000461389 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
PTK7-207ENST00000461389 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
PTK7-207ENST00000461389 PEG3Q9GZU2 1588 aa27.02■■□□□ 1.92
PTK7-207ENST00000461389 HMGXB3Q12766 1538 aa27■■□□□ 1.91
PTK7-207ENST00000461389 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
PTK7-207ENST00000461389 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.9
PTK7-207ENST00000461389 RSF1Q96T23 1441 aaPredicted RBP26.69■■□□□ 1.86
PTK7-207ENST00000461389 WIZO95785 1651 aa26.69■■□□□ 1.86
PTK7-207ENST00000461389 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
PTK7-207ENST00000461389 LAMC3Q9Y6N6 1575 aa26.42■■□□□ 1.82
PTK7-207ENST00000461389 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
PTK7-207ENST00000461389 NESP48681 1621 aa26.3■■□□□ 1.8
PTK7-207ENST00000461389 CADPSQ9ULU8 1353 aa26.28■■□□□ 1.8
PTK7-207ENST00000461389 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
PTK7-207ENST00000461389 CFTRP13569 1480 aa26.14■■□□□ 1.78
PTK7-207ENST00000461389 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
PTK7-207ENST00000461389 CUX2O14529 1486 aa26.1■■□□□ 1.77
PTK7-207ENST00000461389 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
PTK7-207ENST00000461389 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
PTK7-207ENST00000461389 THOC2Q8NI27 1593 aaKnown RBP26.01■■□□□ 1.75
PTK7-207ENST00000461389 CEP164Q9UPV0 1460 aa25.99■■□□□ 1.75
PTK7-207ENST00000461389 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
PTK7-207ENST00000461389 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
PTK7-207ENST00000461389 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
PTK7-207ENST00000461389 WDR62O43379 1518 aa25.85■■□□□ 1.73
PTK7-207ENST00000461389 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
PTK7-207ENST00000461389 URB2Q14146 1524 aaKnown RBP25.67■■□□□ 1.7
PTK7-207ENST00000461389 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
PTK7-207ENST00000461389 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
PTK7-207ENST00000461389 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
PTK7-207ENST00000461389 POLA1P09884 1462 aaPredicted RBP25.33■■□□□ 1.65
PTK7-207ENST00000461389 CUX1P39880 1505 aa25.32■■□□□ 1.64
PTK7-207ENST00000461389 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
PTK7-207ENST00000461389 TARBP1Q13395 1621 aaKnown RBP25.27■■□□□ 1.64
PTK7-207ENST00000461389 WDR97A6NE52 1622 aa25.24■■□□□ 1.63
PTK7-207ENST00000461389 SOGA1O94964 1423 aa25.23■■□□□ 1.63
PTK7-207ENST00000461389 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
PTK7-207ENST00000461389 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
PTK7-207ENST00000461389 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
PTK7-207ENST00000461389 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
PTK7-207ENST00000461389 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
PTK7-207ENST00000461389 DNAJC5Q9H3Z4 198 aa25.16■■□□□ 1.62
PTK7-207ENST00000461389 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
PTK7-207ENST00000461389 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
PTK7-207ENST00000461389 AQRO60306 1485 aaKnown RBP eCLIP25.07■■□□□ 1.65e-7■■■■■ 27.6
PTK7-207ENST00000461389 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
PTK7-207ENST00000461389 TDRD9Q8NDG6 1382 aaKnown RBP25.03■■□□□ 1.6
PTK7-207ENST00000461389 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
PTK7-207ENST00000461389 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
PTK7-207ENST00000461389 ABCA5Q8WWZ7 1642 aa24.96■■□□□ 1.59
PTK7-207ENST00000461389 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
PTK7-207ENST00000461389 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
PTK7-207ENST00000461389 PBRM1Q86U86 1689 aa24.92■■□□□ 1.58
PTK7-207ENST00000461389 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.58
PTK7-207ENST00000461389 CHD1O14646 1710 aa24.85■■□□□ 1.57
PTK7-207ENST00000461389 SYNJ2O15056 1496 aa24.83■■□□□ 1.56
PTK7-207ENST00000461389 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
PTK7-207ENST00000461389 FBLN2P98095 1184 aa24.79■■□□□ 1.56
PTK7-207ENST00000461389 CHMP7Q8WUX9 453 aaPredicted RBP24.78■■□□□ 1.56
PTK7-207ENST00000461389 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
PTK7-207ENST00000461389 ADAMTS12P58397 1594 aa24.72■■□□□ 1.55
PTK7-207ENST00000461389 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.55
PTK7-207ENST00000461389 GRIN2AQ12879 1464 aa24.64■■□□□ 1.54
PTK7-207ENST00000461389 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
PTK7-207ENST00000461389 CUL7Q14999 1698 aa24.61■■□□□ 1.53
PTK7-207ENST00000461389 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
PTK7-207ENST00000461389 ARHGEF11O15085 1522 aa24.54■■□□□ 1.52
PTK7-207ENST00000461389 IGF1RP08069 1367 aa24.54■■□□□ 1.52
PTK7-207ENST00000461389 NUP160Q12769 1436 aa24.52■■□□□ 1.52
PTK7-207ENST00000461389 RIMBP3CA6NJZ7 1639 aa24.52■■□□□ 1.52
PTK7-207ENST00000461389 RIMBP3BA6NNM3 1639 aa24.52■■□□□ 1.52
PTK7-207ENST00000461389 RIMBP3Q9UFD9 1639 aa24.52■■□□□ 1.52
PTK7-207ENST00000461389 CEP170Q5SW79 1584 aa24.47■■□□□ 1.51
PTK7-207ENST00000461389 CARMIL1Q5VZK9 1371 aa24.43■■□□□ 1.5
PTK7-207ENST00000461389 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
PTK7-207ENST00000461389 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
PTK7-207ENST00000461389 EEA1Q15075 1411 aa24.34■■□□□ 1.49
PTK7-207ENST00000461389 RAPGEF2Q9Y4G8 1499 aa24.32■■□□□ 1.48
PTK7-207ENST00000461389 KIAA0586Q9BVV6 1533 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms