RNA–Protein interactions for RNA: ENST00000587840.5

ILF3-207, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 5

Gene ILF3, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-207ENST00000587840 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
ILF3-207ENST00000587840 ABCC9O60706 1549 aa35.67■■■■□ 3.3
ILF3-207ENST00000587840 CCDC180Q9P1Z9 1646 aa35.48■■■■□ 3.27
ILF3-207ENST00000587840 RB1CC1Q8TDY2 1594 aa33.89■■■■□ 3.02
ILF3-207ENST00000587840 DNAJC5BQ9UF47 199 aa33.71■■■□□ 2.99
ILF3-207ENST00000587840 NACADO15069 1562 aa33.59■■■□□ 2.97
ILF3-207ENST00000587840 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
ILF3-207ENST00000587840 UNC13AQ9UPW8 1703 aa33.16■■■□□ 2.9
ILF3-207ENST00000587840 PABPN1Q86U42 306 aaKnown RBP eCLIP33.1■■■□□ 2.895e-10■□□□□ 8.4
ILF3-207ENST00000587840 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
ILF3-207ENST00000587840 BICRAQ9NZM4 1560 aa32.9■■■□□ 2.86
ILF3-207ENST00000587840 ZCCHC6Q5VYS8 1495 aaKnown RBP32.5■■■□□ 2.79
ILF3-207ENST00000587840 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
ILF3-207ENST00000587840 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
ILF3-207ENST00000587840 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.76
ILF3-207ENST00000587840 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
ILF3-207ENST00000587840 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.75
ILF3-207ENST00000587840 EIF4G1Q04637 1599 aaKnown RBP32.12■■■□□ 2.73
ILF3-207ENST00000587840 DNAJC5Q9H3Z4 198 aa31.25■■■□□ 2.59
ILF3-207ENST00000587840 NCAPD3P42695 1498 aa30.98■■■□□ 2.55
ILF3-207ENST00000587840 CUX2O14529 1486 aa30.96■■■□□ 2.55
ILF3-207ENST00000587840 ERCC6Q03468 1493 aa30.85■■■□□ 2.53
ILF3-207ENST00000587840 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
ILF3-207ENST00000587840 SMARCA2P51531 1590 aa30.76■■■□□ 2.52
ILF3-207ENST00000587840 HMGXB3Q12766 1538 aa30.76■■■□□ 2.51
ILF3-207ENST00000587840 SMARCA4P51532 1647 aa30.74■■■□□ 2.51
ILF3-207ENST00000587840 NESP48681 1621 aa30.55■■■□□ 2.48
ILF3-207ENST00000587840 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
ILF3-207ENST00000587840 BAZ1BQ9UIG0 1483 aaKnown RBP30.51■■■□□ 2.48
ILF3-207ENST00000587840 PEG3Q9GZU2 1588 aa30.48■■■□□ 2.47
ILF3-207ENST00000587840 THOC2Q8NI27 1593 aaKnown RBP30.39■■■□□ 2.46
ILF3-207ENST00000587840 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
ILF3-207ENST00000587840 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
ILF3-207ENST00000587840 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
ILF3-207ENST00000587840 PDS5BQ9NTI5 1447 aa30.17■■■□□ 2.42
ILF3-207ENST00000587840 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
ILF3-207ENST00000587840 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
ILF3-207ENST00000587840 WDR62O43379 1518 aa29.89■■■□□ 2.38
ILF3-207ENST00000587840 WIZO95785 1651 aa29.88■■■□□ 2.37
ILF3-207ENST00000587840 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
ILF3-207ENST00000587840 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
ILF3-207ENST00000587840 FANCD2Q9BXW9 1451 aa29.67■■■□□ 2.34
ILF3-207ENST00000587840 CFTRP13569 1480 aa29.61■■■□□ 2.33
ILF3-207ENST00000587840 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
ILF3-207ENST00000587840 RSF1Q96T23 1441 aaPredicted RBP29.49■■■□□ 2.31
ILF3-207ENST00000587840 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.3
ILF3-207ENST00000587840 OSCARQ8IYS5 282 aa29.42■■■□□ 2.3
ILF3-207ENST00000587840 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
ILF3-207ENST00000587840 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
ILF3-207ENST00000587840 CCDC88BA6NC98 1476 aa29.14■■■□□ 2.26
ILF3-207ENST00000587840 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
ILF3-207ENST00000587840 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
ILF3-207ENST00000587840 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
ILF3-207ENST00000587840 ZNF608Q9ULD9 1512 aaPredicted RBP29.11■■■□□ 2.25
ILF3-207ENST00000587840 TOPBP1Q92547 1522 aa29.08■■■□□ 2.25
ILF3-207ENST00000587840 ABCC8Q09428 1581 aa29.03■■■□□ 2.24
ILF3-207ENST00000587840 EIF4G3O43432 1585 aaKnown RBP28.99■■■□□ 2.23
ILF3-207ENST00000587840 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
ILF3-207ENST00000587840 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
ILF3-207ENST00000587840 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
ILF3-207ENST00000587840 CHD1O14646 1710 aa28.85■■■□□ 2.21
ILF3-207ENST00000587840 AQRO60306 1485 aaKnown RBP eCLIP28.79■■■□□ 2.26e-9■■■■□ 19.5
ILF3-207ENST00000587840 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
ILF3-207ENST00000587840 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
ILF3-207ENST00000587840 ARAP1Q96P48 1450 aa28.67■■■□□ 2.18
ILF3-207ENST00000587840 FBLN2P98095 1184 aa28.63■■■□□ 2.17
ILF3-207ENST00000587840 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
ILF3-207ENST00000587840 WDR97A6NE52 1622 aa28.61■■■□□ 2.17
ILF3-207ENST00000587840 SOGA1O94964 1423 aa28.6■■■□□ 2.17
ILF3-207ENST00000587840 TDRD9Q8NDG6 1382 aaKnown RBP28.55■■■□□ 2.16
ILF3-207ENST00000587840 SNAPC4Q5SXM2 1469 aa28.52■■■□□ 2.16
ILF3-207ENST00000587840 FGD5Q6ZNL6 1462 aa28.52■■■□□ 2.16
ILF3-207ENST00000587840 TRHP20396 242 aaPredicted RBP28.51■■■□□ 2.15
ILF3-207ENST00000587840 CLASP1Q7Z460 1538 aa28.5■■■□□ 2.15
ILF3-207ENST00000587840 MAGI1Q96QZ7 1491 aaPredicted RBP28.47■■■□□ 2.15
ILF3-207ENST00000587840 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
ILF3-207ENST00000587840 CUX1P39880 1505 aa28.44■■■□□ 2.14
ILF3-207ENST00000587840 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
ILF3-207ENST00000587840 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
ILF3-207ENST00000587840 SYNJ2O15056 1496 aa28.37■■■□□ 2.13
ILF3-207ENST00000587840 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
ILF3-207ENST00000587840 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
ILF3-207ENST00000587840 ABCA5Q8WWZ7 1642 aa28.21■■■□□ 2.11
ILF3-207ENST00000587840 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
ILF3-207ENST00000587840 GRIN2AQ12879 1464 aa28.05■■■□□ 2.08
ILF3-207ENST00000587840 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
ILF3-207ENST00000587840 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
ILF3-207ENST00000587840 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
ILF3-207ENST00000587840 NUP160Q12769 1436 aa27.97■■■□□ 2.07
ILF3-207ENST00000587840 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
ILF3-207ENST00000587840 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
ILF3-207ENST00000587840 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
ILF3-207ENST00000587840 AEBP2Q6ZN18 517 aaPredicted RBP27.93■■■□□ 2.06
ILF3-207ENST00000587840 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
ILF3-207ENST00000587840 FHAD1B1AJZ9 1412 aa27.9■■■□□ 2.06
ILF3-207ENST00000587840 ERICH3Q5RHP9 1530 aa27.86■■■□□ 2.05
ILF3-207ENST00000587840 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
ILF3-207ENST00000587840 KIF13AQ9H1H9 1805 aa27.74■■■□□ 2.03
ILF3-207ENST00000587840 PRG4Q92954 1404 aaPredicted RBP27.7■■■□□ 2.03
ILF3-207ENST00000587840 RUSC2Q8N2Y8 1516 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms