RNA–Protein interactions for RNA: ENST00000540933.5

GANAB-216, Transcript of glucosidase II alpha subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GANAB, Length 3,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GANAB-216ENST00000540933 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
GANAB-216ENST00000540933 HRCP23327 699 aa19.12■□□□□ 0.65
GANAB-216ENST00000540933 DCAF8L2P0C7V8 631 aa19.04■□□□□ 0.64
GANAB-216ENST00000540933 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
GANAB-216ENST00000540933 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.61
GANAB-216ENST00000540933 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
GANAB-216ENST00000540933 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
GANAB-216ENST00000540933 PCGF6Q9BYE7 350 aa18.67■□□□□ 0.58
GANAB-216ENST00000540933 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
GANAB-216ENST00000540933 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
GANAB-216ENST00000540933 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
GANAB-216ENST00000540933 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
GANAB-216ENST00000540933 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
GANAB-216ENST00000540933 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
GANAB-216ENST00000540933 TRIM26Q12899 539 aaPredicted RBP18.2■□□□□ 0.5
GANAB-216ENST00000540933 ABCC9O60706 1549 aa18.18■□□□□ 0.5
GANAB-216ENST00000540933 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
GANAB-216ENST00000540933 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
GANAB-216ENST00000540933 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
GANAB-216ENST00000540933 MYT1Q01538 1121 aa17.87■□□□□ 0.45
GANAB-216ENST00000540933 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
GANAB-216ENST00000540933 NACADO15069 1562 aa17.64■□□□□ 0.41
GANAB-216ENST00000540933 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
GANAB-216ENST00000540933 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
GANAB-216ENST00000540933 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
GANAB-216ENST00000540933 NEUROD1Q13562 356 aa17.51■□□□□ 0.39
GANAB-216ENST00000540933 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
GANAB-216ENST00000540933 CENPBP07199 599 aaPredicted RBP17.51■□□□□ 0.39
GANAB-216ENST00000540933 GTF3C3Q9Y5Q9 886 aa17.44■□□□□ 0.38
GANAB-216ENST00000540933 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
GANAB-216ENST00000540933 CCER1Q8TC90 406 aaPredicted RBP17.35■□□□□ 0.37
GANAB-216ENST00000540933 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
GANAB-216ENST00000540933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
GANAB-216ENST00000540933 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.36
GANAB-216ENST00000540933 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
GANAB-216ENST00000540933 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
GANAB-216ENST00000540933 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
GANAB-216ENST00000540933 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
GANAB-216ENST00000540933 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.313e-6■■■□□ 16.7
GANAB-216ENST00000540933 YTHDC1Q96MU7 727 aaKnown RBP16.97■□□□□ 0.31
GANAB-216ENST00000540933 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.35e-6■□□□□ 8.4
GANAB-216ENST00000540933 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
GANAB-216ENST00000540933 MIER1Q8N108 512 aa16.86■□□□□ 0.29
GANAB-216ENST00000540933 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
GANAB-216ENST00000540933 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
GANAB-216ENST00000540933 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
GANAB-216ENST00000540933 CECR2Q9BXF3 1484 aa16.81■□□□□ 0.28
GANAB-216ENST00000540933 WIZO95785 1651 aa16.79■□□□□ 0.28
GANAB-216ENST00000540933 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
GANAB-216ENST00000540933 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
GANAB-216ENST00000540933 EEA1Q15075 1411 aa16.69■□□□□ 0.26
GANAB-216ENST00000540933 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
GANAB-216ENST00000540933 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
GANAB-216ENST00000540933 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
GANAB-216ENST00000540933 SUPT16HQ9Y5B9 1047 aaKnown RBP16.64■□□□□ 0.25
GANAB-216ENST00000540933 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
GANAB-216ENST00000540933 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
GANAB-216ENST00000540933 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
GANAB-216ENST00000540933 SOGA1O94964 1423 aa16.59■□□□□ 0.25
GANAB-216ENST00000540933 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
GANAB-216ENST00000540933 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
GANAB-216ENST00000540933 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
GANAB-216ENST00000540933 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
GANAB-216ENST00000540933 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
GANAB-216ENST00000540933 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
GANAB-216ENST00000540933 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
GANAB-216ENST00000540933 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
GANAB-216ENST00000540933 CEP164Q9UPV0 1460 aa16.44■□□□□ 0.22
GANAB-216ENST00000540933 APLP2Q06481 763 aa16.43■□□□□ 0.22
GANAB-216ENST00000540933 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
GANAB-216ENST00000540933 CLIP1P30622 1438 aa16.42■□□□□ 0.22
GANAB-216ENST00000540933 KIF21BO75037 1637 aa16.42■□□□□ 0.22
GANAB-216ENST00000540933 SMARCA4P51532 1647 aa16.39■□□□□ 0.21
GANAB-216ENST00000540933 DHX57Q6P158 1386 aaKnown RBP16.36■□□□□ 0.21
GANAB-216ENST00000540933 ATP1B4Q9UN42 357 aaPredicted RBP16.35■□□□□ 0.21
GANAB-216ENST00000540933 ITGAEP38570 1179 aa16.34■□□□□ 0.21
GANAB-216ENST00000540933 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
GANAB-216ENST00000540933 PEG3Q9GZU2 1588 aa16.31■□□□□ 0.2
GANAB-216ENST00000540933 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
GANAB-216ENST00000540933 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
GANAB-216ENST00000540933 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
GANAB-216ENST00000540933 BCANQ96GW7 911 aa16.21■□□□□ 0.19
GANAB-216ENST00000540933 FKBP8Q14318 412 aa16.2■□□□□ 0.18
GANAB-216ENST00000540933 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
GANAB-216ENST00000540933 NEFLP07196 543 aa16.19■□□□□ 0.18
GANAB-216ENST00000540933 RAPGEF2Q9Y4G8 1499 aa16.18■□□□□ 0.18
GANAB-216ENST00000540933 RBM19Q9Y4C8 960 aaKnown RBP16.17■□□□□ 0.18
GANAB-216ENST00000540933 CUX2O14529 1486 aa16.16■□□□□ 0.18
GANAB-216ENST00000540933 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
GANAB-216ENST00000540933 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
GANAB-216ENST00000540933 CNGB1Q14028 1251 aaPredicted RBP16.11■□□□□ 0.17
GANAB-216ENST00000540933 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
GANAB-216ENST00000540933 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
GANAB-216ENST00000540933 CCNB3Q8WWL7 1395 aa16.04■□□□□ 0.16
GANAB-216ENST00000540933 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.16
GANAB-216ENST00000540933 CCER2I3L3R5 266 aa16■□□□□ 0.15
GANAB-216ENST00000540933 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
GANAB-216ENST00000540933 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
GANAB-216ENST00000540933 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
GANAB-216ENST00000540933 ERICH6Q7L0X2 663 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms