RNA–Protein interactions for RNA: ENST00000220166.9

CTSH-201, Transcript of cathepsin H, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSH, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-201ENST00000220166 NISCHQ9Y2I1 1504 aa38.59■■■■□ 3.77
CTSH-201ENST00000220166 SHROOM4Q9ULL8 1493 aa32.84■■■□□ 2.85
CTSH-201ENST00000220166 CCDC180Q9P1Z9 1646 aa32.82■■■□□ 2.84
CTSH-201ENST00000220166 ZCCHC6Q5VYS8 1495 aaKnown RBP32.7■■■□□ 2.83
CTSH-201ENST00000220166 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
CTSH-201ENST00000220166 DCAF1Q9Y4B6 1507 aa31.77■■■□□ 2.68
CTSH-201ENST00000220166 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.67
CTSH-201ENST00000220166 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
CTSH-201ENST00000220166 MYO15BQ96JP2 1530 aa31.53■■■□□ 2.64
CTSH-201ENST00000220166 HRCP23327 699 aa31.05■■■□□ 2.56
CTSH-201ENST00000220166 ABCC9O60706 1549 aa30.92■■■□□ 2.54
CTSH-201ENST00000220166 PCGF6Q9BYE7 350 aa30.79■■■□□ 2.52
CTSH-201ENST00000220166 SCRIBQ14160 1630 aa30.64■■■□□ 2.5
CTSH-201ENST00000220166 LOC105371045A0A1W2PR82 267 aa30.6■■■□□ 2.49
CTSH-201ENST00000220166 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
CTSH-201ENST00000220166 RB1CC1Q8TDY2 1594 aa30.35■■■□□ 2.45
CTSH-201ENST00000220166 TRIM26Q12899 539 aaPredicted RBP30.27■■■□□ 2.44
CTSH-201ENST00000220166 NACADO15069 1562 aa30.25■■■□□ 2.43
CTSH-201ENST00000220166 PPARGC1BQ86YN6 1023 aaKnown RBP30.21■■■□□ 2.43
CTSH-201ENST00000220166 TRIM41Q8WV44 630 aa30.18■■■□□ 2.42
CTSH-201ENST00000220166 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
CTSH-201ENST00000220166 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
CTSH-201ENST00000220166 FAM9AQ8IZU1 332 aaPredicted RBP29.83■■■□□ 2.37
CTSH-201ENST00000220166 WIZO95785 1651 aa29.82■■■□□ 2.36
CTSH-201ENST00000220166 ZEB1P37275 1124 aaPredicted RBP29.79■■■□□ 2.36
CTSH-201ENST00000220166 BAZ1AQ9NRL2 1556 aaPredicted RBP29.74■■■□□ 2.35
CTSH-201ENST00000220166 EIF4G1Q04637 1599 aaKnown RBP29.59■■■□□ 2.33
CTSH-201ENST00000220166 EHMT2Q96KQ7 1210 aa29.47■■■□□ 2.31
CTSH-201ENST00000220166 TOP2AP11388 1531 aaKnown RBP29.43■■■□□ 2.3
CTSH-201ENST00000220166 SMARCA4P51532 1647 aa29.36■■■□□ 2.29
CTSH-201ENST00000220166 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
CTSH-201ENST00000220166 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
CTSH-201ENST00000220166 SMARCA2P51531 1590 aa29.24■■■□□ 2.27
CTSH-201ENST00000220166 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
CTSH-201ENST00000220166 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.25
CTSH-201ENST00000220166 EEA1Q15075 1411 aa29■■■□□ 2.23
CTSH-201ENST00000220166 CEP162Q5TB80 1403 aa28.97■■■□□ 2.23
CTSH-201ENST00000220166 TNIKQ9UKE5 1360 aa28.96■■■□□ 2.23
CTSH-201ENST00000220166 SOGA1O94964 1423 aa28.95■■■□□ 2.22
CTSH-201ENST00000220166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.91■■■□□ 2.22
CTSH-201ENST00000220166 CCER1Q8TC90 406 aaPredicted RBP28.91■■■□□ 2.22
CTSH-201ENST00000220166 CSRNP3Q8WYN3 585 aa28.85■■■□□ 2.21
CTSH-201ENST00000220166 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
CTSH-201ENST00000220166 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
CTSH-201ENST00000220166 RUSC2Q8N2Y8 1516 aa28.78■■■□□ 2.2
CTSH-201ENST00000220166 GOLGA3Q08378 1498 aa28.76■■■□□ 2.19
CTSH-201ENST00000220166 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
CTSH-201ENST00000220166 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.184e-7■□□□□ 8.4
CTSH-201ENST00000220166 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
CTSH-201ENST00000220166 TTBK1Q5TCY1 1321 aaPredicted RBP28.6■■■□□ 2.17
CTSH-201ENST00000220166 KIF21BO75037 1637 aa28.59■■■□□ 2.17
CTSH-201ENST00000220166 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
CTSH-201ENST00000220166 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.17
CTSH-201ENST00000220166 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
CTSH-201ENST00000220166 PELP1Q8IZL8 1130 aaKnown RBP28.49■■■□□ 2.15
CTSH-201ENST00000220166 DIEXFQ68CQ4 756 aaKnown RBP28.47■■■□□ 2.15
CTSH-201ENST00000220166 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
CTSH-201ENST00000220166 CLIP1P30622 1438 aa28.4■■■□□ 2.14
CTSH-201ENST00000220166 ACIN1Q9UKV3 1341 aaKnown RBP28.4■■■□□ 2.14
CTSH-201ENST00000220166 VPS8Q8N3P4 1428 aa28.33■■■□□ 2.13
CTSH-201ENST00000220166 TOP2BQ02880 1626 aa28.27■■■□□ 2.12
CTSH-201ENST00000220166 NEUROD1Q13562 356 aa28.27■■■□□ 2.12
CTSH-201ENST00000220166 RAPGEF2Q9Y4G8 1499 aa28.26■■■□□ 2.12
CTSH-201ENST00000220166 CENPBP07199 599 aaPredicted RBP28.25■■■□□ 2.11
CTSH-201ENST00000220166 ZNF316A6NFI3 1004 aaPredicted RBP28.24■■■□□ 2.11
CTSH-201ENST00000220166 BIVM-ERCC5R4GMW8 1640 aa28.19■■■□□ 2.1
CTSH-201ENST00000220166 APLP2Q06481 763 aa28.16■■■□□ 2.1
CTSH-201ENST00000220166 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.1
CTSH-201ENST00000220166 ERICH3Q5RHP9 1530 aa28.1■■■□□ 2.09
CTSH-201ENST00000220166 PRXQ9BXM0 1461 aa28.03■■■□□ 2.08
CTSH-201ENST00000220166 GTF3C3Q9Y5Q9 886 aa28.01■■■□□ 2.08
CTSH-201ENST00000220166 HMGXB3Q12766 1538 aa28.01■■■□□ 2.07
CTSH-201ENST00000220166 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
CTSH-201ENST00000220166 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
CTSH-201ENST00000220166 ARAP1Q96P48 1450 aa27.92■■■□□ 2.06
CTSH-201ENST00000220166 CUX1P39880 1505 aa27.89■■■□□ 2.06
CTSH-201ENST00000220166 CLSPNQ9HAW4 1339 aa27.85■■■□□ 2.05
CTSH-201ENST00000220166 KIF27Q86VH2 1401 aa27.84■■■□□ 2.05
CTSH-201ENST00000220166 MIER1Q8N108 512 aa27.8■■■□□ 2.04
CTSH-201ENST00000220166 CFTRP13569 1480 aa27.79■■■□□ 2.04
CTSH-201ENST00000220166 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
CTSH-201ENST00000220166 RRBP1Q9P2E9 1410 aaKnown RBP27.71■■■□□ 2.03
CTSH-201ENST00000220166 KANK4Q5T7N3 995 aaPredicted RBP27.71■■■□□ 2.03
CTSH-201ENST00000220166 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.03
CTSH-201ENST00000220166 PRDM2Q13029 1718 aa27.67■■■□□ 2.02
CTSH-201ENST00000220166 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
CTSH-201ENST00000220166 CUX2O14529 1486 aa27.62■■■□□ 2.01
CTSH-201ENST00000220166 CCNB3Q8WWL7 1395 aa27.55■■■□□ 2
CTSH-201ENST00000220166 IGF1RP08069 1367 aa27.48■■□□□ 1.99
CTSH-201ENST00000220166 MAP3K1Q13233 1512 aa27.48■■□□□ 1.99
CTSH-201ENST00000220166 TIAM1Q13009 1591 aa27.42■■□□□ 1.98
CTSH-201ENST00000220166 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
CTSH-201ENST00000220166 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
CTSH-201ENST00000220166 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
CTSH-201ENST00000220166 RAB3GAP2Q9H2M9 1393 aa27.3■■□□□ 1.96
CTSH-201ENST00000220166 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
CTSH-201ENST00000220166 ITGAEP38570 1179 aa27.28■■□□□ 1.96
CTSH-201ENST00000220166 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.96
CTSH-201ENST00000220166 MAPKBP1O60336 1514 aa27.25■■□□□ 1.95
CTSH-201ENST00000220166 CFAP43Q8NDM7 1665 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms