RNA–Protein interactions for RNA: ENST00000589173.1

ILF3-212, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 5

Gene ILF3, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-212ENST00000589173 NISCHQ9Y2I1 1504 aa35.16■■■■□ 3.22
ILF3-212ENST00000589173 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
ILF3-212ENST00000589173 ABCC9O60706 1549 aa30.68■■■□□ 2.5
ILF3-212ENST00000589173 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
ILF3-212ENST00000589173 NACADO15069 1562 aa29.53■■■□□ 2.32
ILF3-212ENST00000589173 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
ILF3-212ENST00000589173 ZCCHC6Q5VYS8 1495 aaKnown RBP29.28■■■□□ 2.28
ILF3-212ENST00000589173 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
ILF3-212ENST00000589173 DCAF1Q9Y4B6 1507 aa29.19■■■□□ 2.26
ILF3-212ENST00000589173 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.22
ILF3-212ENST00000589173 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
ILF3-212ENST00000589173 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.175e-10■□□□□ 8.4
ILF3-212ENST00000589173 DNAJC5BQ9UF47 199 aa28.5■■■□□ 2.15
ILF3-212ENST00000589173 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
ILF3-212ENST00000589173 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
ILF3-212ENST00000589173 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
ILF3-212ENST00000589173 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
ILF3-212ENST00000589173 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
ILF3-212ENST00000589173 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
ILF3-212ENST00000589173 BAZ1AQ9NRL2 1556 aaPredicted RBP27.28■■□□□ 1.96
ILF3-212ENST00000589173 NCAPD3P42695 1498 aa27.24■■□□□ 1.95
ILF3-212ENST00000589173 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
ILF3-212ENST00000589173 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
ILF3-212ENST00000589173 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
ILF3-212ENST00000589173 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
ILF3-212ENST00000589173 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
ILF3-212ENST00000589173 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
ILF3-212ENST00000589173 WIZO95785 1651 aa26.75■■□□□ 1.87
ILF3-212ENST00000589173 RSF1Q96T23 1441 aaPredicted RBP26.71■■□□□ 1.87
ILF3-212ENST00000589173 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
ILF3-212ENST00000589173 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
ILF3-212ENST00000589173 NESP48681 1621 aa26.51■■□□□ 1.83
ILF3-212ENST00000589173 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
ILF3-212ENST00000589173 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
ILF3-212ENST00000589173 CADPSQ9ULU8 1353 aa26.4■■□□□ 1.82
ILF3-212ENST00000589173 CUX2O14529 1486 aa26.35■■□□□ 1.81
ILF3-212ENST00000589173 PDS5BQ9NTI5 1447 aa26.33■■□□□ 1.81
ILF3-212ENST00000589173 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
ILF3-212ENST00000589173 CFTRP13569 1480 aa26.23■■□□□ 1.79
ILF3-212ENST00000589173 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
ILF3-212ENST00000589173 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
ILF3-212ENST00000589173 FANCD2Q9BXW9 1451 aa26.07■■□□□ 1.76
ILF3-212ENST00000589173 PRDM2Q13029 1718 aa26.07■■□□□ 1.76
ILF3-212ENST00000589173 MRC2Q9UBG0 1479 aa26.06■■□□□ 1.76
ILF3-212ENST00000589173 CEP164Q9UPV0 1460 aa26.06■■□□□ 1.76
ILF3-212ENST00000589173 WDR62O43379 1518 aa26.01■■□□□ 1.75
ILF3-212ENST00000589173 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
ILF3-212ENST00000589173 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
ILF3-212ENST00000589173 ABCC8Q09428 1581 aa25.7■■□□□ 1.71
ILF3-212ENST00000589173 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
ILF3-212ENST00000589173 DNMBPQ6XZF7 1577 aa25.63■■□□□ 1.69
ILF3-212ENST00000589173 IFT140Q96RY7 1462 aa25.54■■□□□ 1.68
ILF3-212ENST00000589173 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
ILF3-212ENST00000589173 TARBP1Q13395 1621 aaKnown RBP25.41■■□□□ 1.66
ILF3-212ENST00000589173 CUX1P39880 1505 aa25.4■■□□□ 1.66
ILF3-212ENST00000589173 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
ILF3-212ENST00000589173 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
ILF3-212ENST00000589173 EIF4G3O43432 1585 aaKnown RBP25.31■■□□□ 1.64
ILF3-212ENST00000589173 SOGA1O94964 1423 aa25.29■■□□□ 1.64
ILF3-212ENST00000589173 WDR97A6NE52 1622 aa25.29■■□□□ 1.64
ILF3-212ENST00000589173 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
ILF3-212ENST00000589173 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.635e-11■■■■■ 27.8
ILF3-212ENST00000589173 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
ILF3-212ENST00000589173 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
ILF3-212ENST00000589173 TOP2BQ02880 1626 aa25.18■■□□□ 1.62
ILF3-212ENST00000589173 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
ILF3-212ENST00000589173 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
ILF3-212ENST00000589173 TDRD9Q8NDG6 1382 aaKnown RBP25.12■■□□□ 1.61
ILF3-212ENST00000589173 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
ILF3-212ENST00000589173 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
ILF3-212ENST00000589173 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
ILF3-212ENST00000589173 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
ILF3-212ENST00000589173 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
ILF3-212ENST00000589173 CHD1O14646 1710 aa25.02■■□□□ 1.6
ILF3-212ENST00000589173 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
ILF3-212ENST00000589173 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
ILF3-212ENST00000589173 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
ILF3-212ENST00000589173 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
ILF3-212ENST00000589173 FBLN2P98095 1184 aa24.85■■□□□ 1.57
ILF3-212ENST00000589173 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
ILF3-212ENST00000589173 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
ILF3-212ENST00000589173 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
ILF3-212ENST00000589173 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
ILF3-212ENST00000589173 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
ILF3-212ENST00000589173 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
ILF3-212ENST00000589173 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
ILF3-212ENST00000589173 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
ILF3-212ENST00000589173 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
ILF3-212ENST00000589173 GRIN2AQ12879 1464 aa24.72■■□□□ 1.55
ILF3-212ENST00000589173 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
ILF3-212ENST00000589173 NUP160Q12769 1436 aa24.65■■□□□ 1.54
ILF3-212ENST00000589173 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
ILF3-212ENST00000589173 IGF1RP08069 1367 aa24.59■■□□□ 1.53
ILF3-212ENST00000589173 CUL7Q14999 1698 aa24.58■■□□□ 1.53
ILF3-212ENST00000589173 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
ILF3-212ENST00000589173 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
ILF3-212ENST00000589173 CYB5RLQ6IPT4 315 aa24.46■■□□□ 1.51
ILF3-212ENST00000589173 CARMIL1Q5VZK9 1371 aa24.43■■□□□ 1.5
ILF3-212ENST00000589173 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
ILF3-212ENST00000589173 KIAA0586Q9BVV6 1533 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms