RNA–Protein interactions for RNA: ENST00000589416.5

ILF3-214, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 4

Gene ILF3, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-214ENST00000589416 NISCHQ9Y2I1 1504 aa36.32■■■■□ 3.4
ILF3-214ENST00000589416 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
ILF3-214ENST00000589416 ABCC9O60706 1549 aa31.46■■■□□ 2.63
ILF3-214ENST00000589416 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
ILF3-214ENST00000589416 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
ILF3-214ENST00000589416 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
ILF3-214ENST00000589416 MYO15BQ96JP2 1530 aa29.95■■■□□ 2.38
ILF3-214ENST00000589416 NACADO15069 1562 aa29.92■■■□□ 2.38
ILF3-214ENST00000589416 RB1CC1Q8TDY2 1594 aa29.87■■■□□ 2.37
ILF3-214ENST00000589416 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
ILF3-214ENST00000589416 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
ILF3-214ENST00000589416 PABPN1Q86U42 306 aaKnown RBP eCLIP29.23■■■□□ 2.275e-10■□□□□ 8.4
ILF3-214ENST00000589416 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
ILF3-214ENST00000589416 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
ILF3-214ENST00000589416 BICRAQ9NZM4 1560 aa29.03■■■□□ 2.24
ILF3-214ENST00000589416 CC2D2AQ9P2K1 1620 aa28.39■■■□□ 2.13
ILF3-214ENST00000589416 CECR2Q9BXF3 1484 aa28.39■■■□□ 2.13
ILF3-214ENST00000589416 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
ILF3-214ENST00000589416 BAZ1AQ9NRL2 1556 aaPredicted RBP28.12■■■□□ 2.09
ILF3-214ENST00000589416 SMARCA4P51532 1647 aa28.08■■■□□ 2.09
ILF3-214ENST00000589416 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
ILF3-214ENST00000589416 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
ILF3-214ENST00000589416 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
ILF3-214ENST00000589416 WIZO95785 1651 aa27.76■■■□□ 2.03
ILF3-214ENST00000589416 DNAJC5Q9H3Z4 198 aa27.73■■■□□ 2.03
ILF3-214ENST00000589416 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
ILF3-214ENST00000589416 ATAD2BQ9ULI0 1458 aa27.71■■■□□ 2.03
ILF3-214ENST00000589416 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
ILF3-214ENST00000589416 NCAPD3P42695 1498 aa27.57■■■□□ 2
ILF3-214ENST00000589416 HMGXB3Q12766 1538 aa27.56■■■□□ 2
ILF3-214ENST00000589416 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
ILF3-214ENST00000589416 TOP2AP11388 1531 aaKnown RBP27.53■■■□□ 2
ILF3-214ENST00000589416 CUX2O14529 1486 aa27.29■■□□□ 1.96
ILF3-214ENST00000589416 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
ILF3-214ENST00000589416 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
ILF3-214ENST00000589416 NESP48681 1621 aa26.96■■□□□ 1.91
ILF3-214ENST00000589416 CFTRP13569 1480 aa26.81■■□□□ 1.88
ILF3-214ENST00000589416 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
ILF3-214ENST00000589416 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
ILF3-214ENST00000589416 PRDM2Q13029 1718 aa26.7■■□□□ 1.87
ILF3-214ENST00000589416 THOC2Q8NI27 1593 aaKnown RBP26.69■■□□□ 1.86
ILF3-214ENST00000589416 PDS5BQ9NTI5 1447 aa26.67■■□□□ 1.86
ILF3-214ENST00000589416 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
ILF3-214ENST00000589416 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
ILF3-214ENST00000589416 CEP164Q9UPV0 1460 aa26.46■■□□□ 1.83
ILF3-214ENST00000589416 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
ILF3-214ENST00000589416 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
ILF3-214ENST00000589416 MRC2Q9UBG0 1479 aa26.39■■□□□ 1.82
ILF3-214ENST00000589416 WRNQ14191 1432 aaPredicted RBP eCLIP26.32■■□□□ 1.8
ILF3-214ENST00000589416 WDR62O43379 1518 aa26.31■■□□□ 1.8
ILF3-214ENST00000589416 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
ILF3-214ENST00000589416 CUX1P39880 1505 aa26.26■■□□□ 1.79
ILF3-214ENST00000589416 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
ILF3-214ENST00000589416 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
ILF3-214ENST00000589416 BIVM-ERCC5R4GMW8 1640 aa26.22■■□□□ 1.79
ILF3-214ENST00000589416 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
ILF3-214ENST00000589416 TOP2BQ02880 1626 aa26.21■■□□□ 1.79
ILF3-214ENST00000589416 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
ILF3-214ENST00000589416 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
ILF3-214ENST00000589416 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
ILF3-214ENST00000589416 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
ILF3-214ENST00000589416 RAD54L2Q9Y4B4 1467 aa25.89■■□□□ 1.73
ILF3-214ENST00000589416 SOGA1O94964 1423 aa25.88■■□□□ 1.73
ILF3-214ENST00000589416 WDR97A6NE52 1622 aa25.86■■□□□ 1.73
ILF3-214ENST00000589416 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
ILF3-214ENST00000589416 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
ILF3-214ENST00000589416 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.72
ILF3-214ENST00000589416 ZNF608Q9ULD9 1512 aaPredicted RBP25.77■■□□□ 1.72
ILF3-214ENST00000589416 ABCA5Q8WWZ7 1642 aa25.71■■□□□ 1.71
ILF3-214ENST00000589416 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
ILF3-214ENST00000589416 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
ILF3-214ENST00000589416 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
ILF3-214ENST00000589416 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
ILF3-214ENST00000589416 RIMBP3Q9UFD9 1639 aa25.68■■□□□ 1.7
ILF3-214ENST00000589416 EIF4G3O43432 1585 aaKnown RBP25.67■■□□□ 1.7
ILF3-214ENST00000589416 EEA1Q15075 1411 aa25.67■■□□□ 1.7
ILF3-214ENST00000589416 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
ILF3-214ENST00000589416 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
ILF3-214ENST00000589416 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.696e-9■■■■□ 19.5
ILF3-214ENST00000589416 PBRM1Q86U86 1689 aa25.58■■□□□ 1.68
ILF3-214ENST00000589416 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
ILF3-214ENST00000589416 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
ILF3-214ENST00000589416 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
ILF3-214ENST00000589416 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
ILF3-214ENST00000589416 IGF1RP08069 1367 aa25.46■■□□□ 1.67
ILF3-214ENST00000589416 CUL7Q14999 1698 aa25.46■■□□□ 1.67
ILF3-214ENST00000589416 CSRNP3Q8WYN3 585 aa25.46■■□□□ 1.67
ILF3-214ENST00000589416 SNAPC4Q5SXM2 1469 aa25.44■■□□□ 1.66
ILF3-214ENST00000589416 ADAMTS12P58397 1594 aa25.44■■□□□ 1.66
ILF3-214ENST00000589416 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
ILF3-214ENST00000589416 KIF21BO75037 1637 aa25.4■■□□□ 1.66
ILF3-214ENST00000589416 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
ILF3-214ENST00000589416 PRXQ9BXM0 1461 aa25.39■■□□□ 1.65
ILF3-214ENST00000589416 FBLN2P98095 1184 aa25.35■■□□□ 1.65
ILF3-214ENST00000589416 CHD1O14646 1710 aa25.34■■□□□ 1.65
ILF3-214ENST00000589416 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
ILF3-214ENST00000589416 FHAD1B1AJZ9 1412 aa25.34■■□□□ 1.65
ILF3-214ENST00000589416 TRHP20396 242 aaPredicted RBP25.32■■□□□ 1.64
ILF3-214ENST00000589416 RAPGEF2Q9Y4G8 1499 aa25.31■■□□□ 1.64
ILF3-214ENST00000589416 SYNJ2O15056 1496 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms