RNA–Protein interactions for RNA: ENST00000573001.5

TNFRSF12A-204, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3 BASIC

Gene TNFRSF12A, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-204ENST00000573001 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
TNFRSF12A-204ENST00000573001 ABCC9O60706 1549 aa29.73■■■□□ 2.35
TNFRSF12A-204ENST00000573001 CCDC180Q9P1Z9 1646 aa29.14■■■□□ 2.26
TNFRSF12A-204ENST00000573001 DNAJC5BQ9UF47 199 aa28.52■■■□□ 2.16
TNFRSF12A-204ENST00000573001 RB1CC1Q8TDY2 1594 aa28.03■■■□□ 2.08
TNFRSF12A-204ENST00000573001 NACADO15069 1562 aa27.72■■■□□ 2.03
TNFRSF12A-204ENST00000573001 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.014e-7■□□□□ 8.4
TNFRSF12A-204ENST00000573001 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
TNFRSF12A-204ENST00000573001 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
TNFRSF12A-204ENST00000573001 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
TNFRSF12A-204ENST00000573001 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
TNFRSF12A-204ENST00000573001 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
TNFRSF12A-204ENST00000573001 SHROOM4Q9ULL8 1493 aa26.87■■□□□ 1.89
TNFRSF12A-204ENST00000573001 CC2D2AQ9P2K1 1620 aa26.83■■□□□ 1.89
TNFRSF12A-204ENST00000573001 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
TNFRSF12A-204ENST00000573001 DNAJC5Q9H3Z4 198 aa26.63■■□□□ 1.85
TNFRSF12A-204ENST00000573001 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
TNFRSF12A-204ENST00000573001 ZCCHC6Q5VYS8 1495 aaKnown RBP26.57■■□□□ 1.84
TNFRSF12A-204ENST00000573001 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
TNFRSF12A-204ENST00000573001 CUX2O14529 1486 aa25.91■■□□□ 1.74
TNFRSF12A-204ENST00000573001 ERCC6Q03468 1493 aa25.68■■□□□ 1.7
TNFRSF12A-204ENST00000573001 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
TNFRSF12A-204ENST00000573001 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
TNFRSF12A-204ENST00000573001 NESP48681 1621 aa25.39■■□□□ 1.66
TNFRSF12A-204ENST00000573001 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
TNFRSF12A-204ENST00000573001 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
TNFRSF12A-204ENST00000573001 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
TNFRSF12A-204ENST00000573001 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
TNFRSF12A-204ENST00000573001 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
TNFRSF12A-204ENST00000573001 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
TNFRSF12A-204ENST00000573001 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
TNFRSF12A-204ENST00000573001 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
TNFRSF12A-204ENST00000573001 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
TNFRSF12A-204ENST00000573001 KIF21AQ7Z4S6 1674 aa25■■□□□ 1.59
TNFRSF12A-204ENST00000573001 PDS5BQ9NTI5 1447 aa24.98■■□□□ 1.59
TNFRSF12A-204ENST00000573001 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
TNFRSF12A-204ENST00000573001 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
TNFRSF12A-204ENST00000573001 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
TNFRSF12A-204ENST00000573001 WDR62O43379 1518 aa24.78■■□□□ 1.56
TNFRSF12A-204ENST00000573001 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
TNFRSF12A-204ENST00000573001 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
TNFRSF12A-204ENST00000573001 FANCD2Q9BXW9 1451 aa24.5■■□□□ 1.51
TNFRSF12A-204ENST00000573001 WIZO95785 1651 aa24.44■■□□□ 1.5
TNFRSF12A-204ENST00000573001 CFTRP13569 1480 aa24.41■■□□□ 1.5
TNFRSF12A-204ENST00000573001 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
TNFRSF12A-204ENST00000573001 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
TNFRSF12A-204ENST00000573001 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
TNFRSF12A-204ENST00000573001 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
TNFRSF12A-204ENST00000573001 ARHGEF11O15085 1522 aa24.23■■□□□ 1.47
TNFRSF12A-204ENST00000573001 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
TNFRSF12A-204ENST00000573001 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
TNFRSF12A-204ENST00000573001 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
TNFRSF12A-204ENST00000573001 RSF1Q96T23 1441 aaPredicted RBP24.09■■□□□ 1.45
TNFRSF12A-204ENST00000573001 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
TNFRSF12A-204ENST00000573001 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
TNFRSF12A-204ENST00000573001 TOPBP1Q92547 1522 aa23.97■■□□□ 1.43
TNFRSF12A-204ENST00000573001 ARAP1Q96P48 1450 aa23.96■■□□□ 1.43
TNFRSF12A-204ENST00000573001 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.43
TNFRSF12A-204ENST00000573001 TRHP20396 242 aaPredicted RBP23.94■■□□□ 1.42
TNFRSF12A-204ENST00000573001 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
TNFRSF12A-204ENST00000573001 CHD1O14646 1710 aa23.87■■□□□ 1.41
TNFRSF12A-204ENST00000573001 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
TNFRSF12A-204ENST00000573001 AQRO60306 1485 aaKnown RBP eCLIP23.85■■□□□ 1.412e-6■■■■■ 28.3
TNFRSF12A-204ENST00000573001 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
TNFRSF12A-204ENST00000573001 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
TNFRSF12A-204ENST00000573001 FBLN2P98095 1184 aa23.74■■□□□ 1.39
TNFRSF12A-204ENST00000573001 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
TNFRSF12A-204ENST00000573001 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF12A-204ENST00000573001 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.38
TNFRSF12A-204ENST00000573001 RAD54L2Q9Y4B4 1467 aa23.61■■□□□ 1.37
TNFRSF12A-204ENST00000573001 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
TNFRSF12A-204ENST00000573001 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
TNFRSF12A-204ENST00000573001 SOGA1O94964 1423 aa23.56■■□□□ 1.36
TNFRSF12A-204ENST00000573001 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
TNFRSF12A-204ENST00000573001 WDR97A6NE52 1622 aa23.52■■□□□ 1.36
TNFRSF12A-204ENST00000573001 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF12A-204ENST00000573001 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF12A-204ENST00000573001 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
TNFRSF12A-204ENST00000573001 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
TNFRSF12A-204ENST00000573001 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
TNFRSF12A-204ENST00000573001 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
TNFRSF12A-204ENST00000573001 CUX1P39880 1505 aa23.34■■□□□ 1.33
TNFRSF12A-204ENST00000573001 PBRM1Q86U86 1689 aa23.24■■□□□ 1.31
TNFRSF12A-204ENST00000573001 ERCC6L2Q5T890 1561 aa23.22■■□□□ 1.31
TNFRSF12A-204ENST00000573001 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
TNFRSF12A-204ENST00000573001 ABCA5Q8WWZ7 1642 aa23.16■■□□□ 1.3
TNFRSF12A-204ENST00000573001 GRIN2AQ12879 1464 aa23.13■■□□□ 1.29
TNFRSF12A-204ENST00000573001 CEP170Q5SW79 1584 aa23.13■■□□□ 1.29
TNFRSF12A-204ENST00000573001 NUP160Q12769 1436 aa23.12■■□□□ 1.29
TNFRSF12A-204ENST00000573001 KIF13AQ9H1H9 1805 aa23.06■■□□□ 1.28
TNFRSF12A-204ENST00000573001 SHROOM2Q13796 1616 aa23.06■■□□□ 1.28
TNFRSF12A-204ENST00000573001 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
TNFRSF12A-204ENST00000573001 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.26
TNFRSF12A-204ENST00000573001 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
TNFRSF12A-204ENST00000573001 ABCC10Q5T3U5 1492 aa22.9■■□□□ 1.26
TNFRSF12A-204ENST00000573001 PRG4Q92954 1404 aaPredicted RBP22.9■■□□□ 1.26
TNFRSF12A-204ENST00000573001 FAM69CQ0P6D2 419 aa22.87■■□□□ 1.25
TNFRSF12A-204ENST00000573001 KDM4FA0A1W2PPD8 638 aa22.86■■□□□ 1.25
TNFRSF12A-204ENST00000573001 ERICH3Q5RHP9 1530 aa22.85■■□□□ 1.25
TNFRSF12A-204ENST00000573001 JPH4Q96JJ6 628 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms