RNA–Protein interactions for RNA: ENST00000406175.3

EML4-204, Transcript of echinoderm microtubule associated protein like 4, humanhuman

TSL 1 (best)

Gene EML4, Length 4,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EML4-204ENST00000406175 NISCHQ9Y2I1 1504 aa10.22□□□□□ -0.77
EML4-204ENST00000406175 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
EML4-204ENST00000406175 MYT1Q01538 1121 aa9.92□□□□□ -0.82
EML4-204ENST00000406175 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
EML4-204ENST00000406175 CENPBP07199 599 aaPredicted RBP9.28□□□□□ -0.92
EML4-204ENST00000406175 PCGF6Q9BYE7 350 aa9.22□□□□□ -0.93
EML4-204ENST00000406175 HRCP23327 699 aa9.2□□□□□ -0.94
EML4-204ENST00000406175 ZEB1P37275 1124 aaPredicted RBP9.19□□□□□ -0.94
EML4-204ENST00000406175 TTBK1Q5TCY1 1321 aaPredicted RBP9.17□□□□□ -0.94
EML4-204ENST00000406175 SUPT5HO00267 1087 aaKnown RBP9.1□□□□□ -0.95
EML4-204ENST00000406175 ERICH6Q7L0X2 663 aa9.08□□□□□ -0.96
EML4-204ENST00000406175 ABCC9O60706 1549 aa9.04□□□□□ -0.96
EML4-204ENST00000406175 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
EML4-204ENST00000406175 SHROOM4Q9ULL8 1493 aa9.01□□□□□ -0.97
EML4-204ENST00000406175 PPARGC1BQ86YN6 1023 aaKnown RBP8.88□□□□□ -0.99
EML4-204ENST00000406175 YTHDC1Q96MU7 727 aaKnown RBP8.83□□□□□ -1
EML4-204ENST00000406175 TRIM26Q12899 539 aaPredicted RBP8.81□□□□□ -1
EML4-204ENST00000406175 NEFLP07196 543 aa8.79□□□□□ -1
EML4-204ENST00000406175 GTF3C3Q9Y5Q9 886 aa8.77□□□□□ -1
EML4-204ENST00000406175 PABPN1Q86U42 306 aaKnown RBP eCLIP8.73□□□□□ -1.018e-7■□□□□ 8.5
EML4-204ENST00000406175 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
EML4-204ENST00000406175 CCDC180Q9P1Z9 1646 aa8.69□□□□□ -1.02
EML4-204ENST00000406175 SCAF1Q9H7N4 1312 aaKnown RBP8.66□□□□□ -1.02
EML4-204ENST00000406175 EHMT2Q96KQ7 1210 aa8.65□□□□□ -1.03
EML4-204ENST00000406175 DIEXFQ68CQ4 756 aaKnown RBP8.64□□□□□ -1.03
EML4-204ENST00000406175 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
EML4-204ENST00000406175 APLP2Q06481 763 aa8.56□□□□□ -1.04
EML4-204ENST00000406175 BCL11AQ9H165 835 aa8.54□□□□□ -1.04
EML4-204ENST00000406175 FAM9AQ8IZU1 332 aaPredicted RBP8.53□□□□□ -1.04
EML4-204ENST00000406175 MYT1LQ9UL68 1186 aa8.53□□□□□ -1.04
EML4-204ENST00000406175 CLSPNQ9HAW4 1339 aa8.5□□□□□ -1.05
EML4-204ENST00000406175 NEUROD1Q13562 356 aa8.49□□□□□ -1.05
EML4-204ENST00000406175 ANP32EQ9BTT0 268 aa8.48□□□□□ -1.05
EML4-204ENST00000406175 ZCCHC6Q5VYS8 1495 aaKnown RBP8.47□□□□□ -1.05
EML4-204ENST00000406175 SCRIBQ14160 1630 aa8.46□□□□□ -1.05
EML4-204ENST00000406175 GLIPR1L2Q4G1C9 344 aa8.45□□□□□ -1.06
EML4-204ENST00000406175 CHIC1Q5VXU3 224 aa8.45□□□□□ -1.06
EML4-204ENST00000406175 DAXXQ9UER7 740 aaPredicted RBP8.44□□□□□ -1.06
EML4-204ENST00000406175 TRIM41Q8WV44 630 aa8.42□□□□□ -1.06
EML4-204ENST00000406175 EIF5BO60841 1220 aaKnown RBP8.41□□□□□ -1.06
EML4-204ENST00000406175 RB1CC1Q8TDY2 1594 aa8.39□□□□□ -1.07
EML4-204ENST00000406175 LOC105371045A0A1W2PR82 267 aa8.39□□□□□ -1.07
EML4-204ENST00000406175 CDK11AQ9UQ88 783 aaPredicted RBP8.39□□□□□ -1.07
EML4-204ENST00000406175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.39□□□□□ -1.07
EML4-204ENST00000406175 BCANQ96GW7 911 aa8.38□□□□□ -1.07
EML4-204ENST00000406175 ZNF316A6NFI3 1004 aaPredicted RBP8.36□□□□□ -1.07
EML4-204ENST00000406175 NACADO15069 1562 aa8.32□□□□□ -1.08
EML4-204ENST00000406175 DCAF1Q9Y4B6 1507 aa8.28□□□□□ -1.08
EML4-204ENST00000406175 ANP32AP39687 249 aaKnown RBP8.25□□□□□ -1.09
EML4-204ENST00000406175 FKBP8Q14318 412 aa8.21□□□□□ -1.1
EML4-204ENST00000406175 UBTFP17480 764 aaKnown RBP8.2□□□□□ -1.1
EML4-204ENST00000406175 PRKCSHP14314 528 aaPredicted RBP8.19□□□□□ -1.1
EML4-204ENST00000406175 HNRNPUL2Q1KMD3 747 aaKnown RBP8.18□□□□□ -1.1
EML4-204ENST00000406175 CSRNP3Q8WYN3 585 aa8.18□□□□□ -1.1
EML4-204ENST00000406175 NBR1Q14596 966 aa8.17□□□□□ -1.1
EML4-204ENST00000406175 CECR2Q9BXF3 1484 aa8.13□□□□□ -1.11
EML4-204ENST00000406175 ZBTB47Q9UFB7 747 aaPredicted RBP8.12□□□□□ -1.11
EML4-204ENST00000406175 ANP32CO43423 234 aa8.12□□□□□ -1.11
EML4-204ENST00000406175 MIER1Q8N108 512 aa8.1□□□□□ -1.11
EML4-204ENST00000406175 DEKP35659 375 aaKnown RBP8.1□□□□□ -1.11
EML4-204ENST00000406175 ERICH6BQ5W0A0 696 aa8.09□□□□□ -1.11
EML4-204ENST00000406175 SUPT16HQ9Y5B9 1047 aaKnown RBP8.09□□□□□ -1.12
EML4-204ENST00000406175 RANGAP1P46060 587 aaPredicted RBP8.08□□□□□ -1.12
EML4-204ENST00000406175 DNAJC5BQ9UF47 199 aa8.07□□□□□ -1.12
EML4-204ENST00000406175 RTN4Q9NQC3 1192 aaKnown RBP8.06□□□□□ -1.12
EML4-204ENST00000406175 NPM2Q86SE8 214 aaKnown RBP8.05□□□□□ -1.12
EML4-204ENST00000406175 MYO15BQ96JP2 1530 aa8.04□□□□□ -1.12
EML4-204ENST00000406175 TSHZ2Q9NRE2 1034 aa8.03□□□□□ -1.12
EML4-204ENST00000406175 ITGAEP38570 1179 aa8.02□□□□□ -1.13
EML4-204ENST00000406175 RBM19Q9Y4C8 960 aaKnown RBP8.02□□□□□ -1.13
EML4-204ENST00000406175 NEFMP07197 916 aa8.01□□□□□ -1.13
EML4-204ENST00000406175 NOP58Q9Y2X3 529 aaKnown RBP7.99□□□□□ -1.13
EML4-204ENST00000406175 RSF1Q96T23 1441 aaPredicted RBP7.99□□□□□ -1.13
EML4-204ENST00000406175 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
EML4-204ENST00000406175 MROH2BQ7Z745 1585 aa7.98□□□□□ -1.13
EML4-204ENST00000406175 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
EML4-204ENST00000406175 PPM1GO15355 546 aaPredicted RBP7.97□□□□□ -1.13
EML4-204ENST00000406175 TNNT2P45379 298 aaPredicted RBP7.97□□□□□ -1.13
EML4-204ENST00000406175 BAZ1BQ9UIG0 1483 aaKnown RBP7.96□□□□□ -1.13
EML4-204ENST00000406175 BICRAQ9NZM4 1560 aa7.95□□□□□ -1.14
EML4-204ENST00000406175 POLR3GLQ9BT43 218 aa7.94□□□□□ -1.14
EML4-204ENST00000406175 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
EML4-204ENST00000406175 SLC24A1O60721 1099 aa7.93□□□□□ -1.14
EML4-204ENST00000406175 CCDC136Q96JN2 1154 aa7.93□□□□□ -1.14
EML4-204ENST00000406175 NAP1L5Q96NT1 182 aaPredicted RBP7.93□□□□□ -1.14
EML4-204ENST00000406175 BAZ1AQ9NRL2 1556 aaPredicted RBP7.93□□□□□ -1.14
EML4-204ENST00000406175 ATP1B4Q9UN42 357 aaPredicted RBP7.93□□□□□ -1.14
EML4-204ENST00000406175 TRIM52Q96A61 297 aa7.92□□□□□ -1.14
EML4-204ENST00000406175 DDRGK1Q96HY6 314 aa7.92□□□□□ -1.14
EML4-204ENST00000406175 UNC13AQ9UPW8 1703 aa7.92□□□□□ -1.14
EML4-204ENST00000406175 FBLN2P98095 1184 aa7.92□□□□□ -1.14
EML4-204ENST00000406175 NCLP19338 710 aaKnown RBP7.91□□□□□ -1.14
EML4-204ENST00000406175 CNGB1Q14028 1251 aaPredicted RBP7.9□□□□□ -1.14
EML4-204ENST00000406175 EIF4G1Q04637 1599 aaKnown RBP7.9□□□□□ -1.15
EML4-204ENST00000406175 PKNOX2Q96KN3 472 aa7.89□□□□□ -1.15
EML4-204ENST00000406175 WIZO95785 1651 aa7.89□□□□□ -1.15
EML4-204ENST00000406175 RSPH6AQ9H0K4 717 aa7.88□□□□□ -1.15
EML4-204ENST00000406175 DDX10Q13206 875 aaKnown RBP7.88□□□□□ -1.15
EML4-204ENST00000406175 TRIM44Q96DX7 344 aaPredicted RBP7.88□□□□□ -1.15
EML4-204ENST00000406175 HSP90AA1P07900 732 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms