RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
CTNND1-205ENST00000399050 SUPT5HO00267 1087 aaKnown RBP14.11□□□□□ -0.15
CTNND1-205ENST00000399050 NISCHQ9Y2I1 1504 aa13.96□□□□□ -0.18
CTNND1-205ENST00000399050 SHROOM4Q9ULL8 1493 aa13.83□□□□□ -0.2
CTNND1-205ENST00000399050 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.2
CTNND1-205ENST00000399050 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
CTNND1-205ENST00000399050 PCGF6Q9BYE7 350 aa13.6□□□□□ -0.23
CTNND1-205ENST00000399050 CENPBP07199 599 aaPredicted RBP13.4□□□□□ -0.26
CTNND1-205ENST00000399050 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
CTNND1-205ENST00000399050 MYT1Q01538 1121 aa13.34□□□□□ -0.27
CTNND1-205ENST00000399050 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
CTNND1-205ENST00000399050 APLP2Q06481 763 aa13.3□□□□□ -0.28
CTNND1-205ENST00000399050 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
CTNND1-205ENST00000399050 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.29
CTNND1-205ENST00000399050 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
CTNND1-205ENST00000399050 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
CTNND1-205ENST00000399050 HRCP23327 699 aa13.1□□□□□ -0.31
CTNND1-205ENST00000399050 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
CTNND1-205ENST00000399050 TRIM26Q12899 539 aaPredicted RBP12.97□□□□□ -0.33
CTNND1-205ENST00000399050 NEFLP07196 543 aa12.97□□□□□ -0.33
CTNND1-205ENST00000399050 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
CTNND1-205ENST00000399050 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
CTNND1-205ENST00000399050 UBTFP17480 764 aaKnown RBP12.82□□□□□ -0.36
CTNND1-205ENST00000399050 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-205ENST00000399050 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
CTNND1-205ENST00000399050 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
CTNND1-205ENST00000399050 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
CTNND1-205ENST00000399050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
CTNND1-205ENST00000399050 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
CTNND1-205ENST00000399050 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
CTNND1-205ENST00000399050 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
CTNND1-205ENST00000399050 ITGAEP38570 1179 aa12.5□□□□□ -0.41
CTNND1-205ENST00000399050 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-205ENST00000399050 POLR3GLQ9BT43 218 aa12.42□□□□□ -0.42
CTNND1-205ENST00000399050 BCANQ96GW7 911 aa12.37□□□□□ -0.43
CTNND1-205ENST00000399050 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
CTNND1-205ENST00000399050 CNGB1Q14028 1251 aaPredicted RBP12.35□□□□□ -0.43
CTNND1-205ENST00000399050 ZNF316A6NFI3 1004 aaPredicted RBP12.31□□□□□ -0.44
CTNND1-205ENST00000399050 CDK11AQ9UQ88 783 aaPredicted RBP12.25□□□□□ -0.45
CTNND1-205ENST00000399050 CLSPNQ9HAW4 1339 aa12.2□□□□□ -0.46
CTNND1-205ENST00000399050 NEUROD1Q13562 356 aa12.18□□□□□ -0.46
CTNND1-205ENST00000399050 ANP32CO43423 234 aa12.17□□□□□ -0.46
CTNND1-205ENST00000399050 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
CTNND1-205ENST00000399050 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
CTNND1-205ENST00000399050 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
CTNND1-205ENST00000399050 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
CTNND1-205ENST00000399050 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
CTNND1-205ENST00000399050 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
CTNND1-205ENST00000399050 ANP32AP39687 249 aaKnown RBP12.03□□□□□ -0.48
CTNND1-205ENST00000399050 FKBP8Q14318 412 aa12.02□□□□□ -0.48
CTNND1-205ENST00000399050 NPM2Q86SE8 214 aaKnown RBP11.96□□□□□ -0.49
CTNND1-205ENST00000399050 EIF5BO60841 1220 aaKnown RBP11.94□□□□□ -0.5
CTNND1-205ENST00000399050 ZNF326Q5BKZ1 582 aaKnown RBP11.93□□□□□ -0.5
CTNND1-205ENST00000399050 NBR1Q14596 966 aa11.87□□□□□ -0.51
CTNND1-205ENST00000399050 CANXP27824 592 aaKnown RBP11.86□□□□□ -0.51
CTNND1-205ENST00000399050 MIER1Q8N108 512 aa11.84□□□□□ -0.51
CTNND1-205ENST00000399050 HNRNPUQ00839 825 aaKnown RBP eCLIP11.83□□□□□ -0.51
CTNND1-205ENST00000399050 DDX10Q13206 875 aaKnown RBP11.82□□□□□ -0.52
CTNND1-205ENST00000399050 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
CTNND1-205ENST00000399050 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-205ENST00000399050 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
CTNND1-205ENST00000399050 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.52
CTNND1-205ENST00000399050 ANP32EQ9BTT0 268 aa11.77□□□□□ -0.52
CTNND1-205ENST00000399050 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.53
CTNND1-205ENST00000399050 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
CTNND1-205ENST00000399050 BCL11AQ9H165 835 aa11.77□□□□□ -0.53
CTNND1-205ENST00000399050 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
CTNND1-205ENST00000399050 P3H3Q8IVL6 736 aa11.74□□□□□ -0.53
CTNND1-205ENST00000399050 CCDC136Q96JN2 1154 aa11.73□□□□□ -0.53
CTNND1-205ENST00000399050 IRX6P78412 446 aaPredicted RBP11.73□□□□□ -0.53
CTNND1-205ENST00000399050 ANP32BQ92688 251 aaKnown RBP11.73□□□□□ -0.53
CTNND1-205ENST00000399050 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.534e-7■□□□□ 8.4
CTNND1-205ENST00000399050 ABCC9O60706 1549 aa11.67□□□□□ -0.54
CTNND1-205ENST00000399050 UPF2Q9HAU5 1272 aaKnown RBP11.67□□□□□ -0.54
CTNND1-205ENST00000399050 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
CTNND1-205ENST00000399050 SALL2Q9Y467 1007 aaPredicted RBP11.66□□□□□ -0.54
CTNND1-205ENST00000399050 ARXQ96QS3 562 aa11.65□□□□□ -0.54
CTNND1-205ENST00000399050 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
CTNND1-205ENST00000399050 NEFMP07197 916 aa11.62□□□□□ -0.55
CTNND1-205ENST00000399050 MRS2Q9HD23 443 aa11.62□□□□□ -0.55
CTNND1-205ENST00000399050 ZCCHC6Q5VYS8 1495 aaKnown RBP11.61□□□□□ -0.55
CTNND1-205ENST00000399050 SCRIBQ14160 1630 aa11.61□□□□□ -0.55
CTNND1-205ENST00000399050 HIRIP3Q9BW71 556 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-205ENST00000399050 TMC1Q8TDI8 760 aa11.61□□□□□ -0.55
CTNND1-205ENST00000399050 SLC24A1O60721 1099 aa11.59□□□□□ -0.55
CTNND1-205ENST00000399050 SUPT16HQ9Y5B9 1047 aaKnown RBP11.58□□□□□ -0.56
CTNND1-205ENST00000399050 ZNF777Q9ULD5 760 aaPredicted RBP11.57□□□□□ -0.56
CTNND1-205ENST00000399050 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.56□□□□□ -0.56
CTNND1-205ENST00000399050 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
CTNND1-205ENST00000399050 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
CTNND1-205ENST00000399050 FBLN2P98095 1184 aa11.5□□□□□ -0.57
CTNND1-205ENST00000399050 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
CTNND1-205ENST00000399050 CLIP1P30622 1438 aa11.49□□□□□ -0.57
CTNND1-205ENST00000399050 WDR43Q15061 677 aaKnown RBP eCLIP11.49□□□□□ -0.573e-9■■■□□ 15.6
CTNND1-205ENST00000399050 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
CTNND1-205ENST00000399050 NOP58Q9Y2X3 529 aaKnown RBP11.48□□□□□ -0.57
CTNND1-205ENST00000399050 EIF4G2P78344 907 aaKnown RBP eCLIP11.47□□□□□ -0.57
CTNND1-205ENST00000399050 BECN1Q14457 450 aa11.47□□□□□ -0.57
CTNND1-205ENST00000399050 TRIM44Q96DX7 344 aaPredicted RBP11.46□□□□□ -0.58
CTNND1-205ENST00000399050 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms