Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 COL27A1-208ENST00000494780 514 ntTSL 448.52■■■■■ 5.365e-21■■■■■ 161.7
PABPN1Q86U42 SRSF2-206ENST00000582449 1518 ntTSL 240.01■■■■■ 47e-7■■■■■ 67.4
PABPN1Q86U42 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.037e-7■■■■■ 67.4
PABPN1Q86U42 SRSF2-204ENST00000452355 1357 ntTSL 532.02■■■□□ 2.727e-7■■■■■ 67.4
PABPN1Q86U42 SRSF2-208ENST00000585202 1359 ntTSL 329.87■■■□□ 2.377e-7■■■■■ 67.4
PABPN1Q86U42 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.247e-7■■■■■ 67.4
PABPN1Q86U42 SRSF2-209ENST00000586778 1001 ntTSL 216.01■□□□□ 0.157e-7■■■■■ 67.4
PABPN1Q86U42 SRSF2-210ENST00000589919 595 ntTSL 214.43□□□□□ -0.17e-7■■■■■ 67.4
PABPN1Q86U42 ACADVL-231ENST00000582450 294 ntTSL 228.5■■■□□ 2.153e-15■■■■■ 57.7
PABPN1Q86U42 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC25.07■■□□□ 1.61e-8■■■■■ 54.7
PABPN1Q86U42 IFT172-212ENST00000479419 420 ntTSL 326.48■■□□□ 1.831e-15■■■■■ 53.6
PABPN1Q86U42 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC37.89■■■■□ 3.667e-15■■■■■ 53.4
PABPN1Q86U42 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC37.89■■■■□ 3.667e-15■■■■■ 53.4
PABPN1Q86U42 SELENOO-202ENST00000492092 1626 ntTSL 1 (best)35.29■■■■□ 3.247e-15■■■■■ 53.4
PABPN1Q86U42 COL27A1-203ENST00000468565 1946 ntTSL 229.03■■■□□ 2.245e-18■■■■■ 53
PABPN1Q86U42 RECQL4-205ENST00000532846 1055 ntTSL 532.52■■■□□ 2.83e-9■■■■■ 52.3
PABPN1Q86U42 ACADVL-225ENST00000581378 752 ntTSL 329.57■■■□□ 2.326e-14■■■■■ 50
PABPN1Q86U42 ACADVL-224ENST00000580365 494 ntTSL 229.42■■■□□ 2.36e-14■■■■■ 50
PABPN1Q86U42 WDR6-208ENST00000452875 3916 ntTSL 1 (best)16.96■□□□□ 0.313e-12■■■■■ 48.6
PABPN1Q86U42 COL27A1-206ENST00000490831 666 ntTSL 330.63■■■□□ 2.494e-16■■■■■ 47.5
PABPN1Q86U42 RECQL4-203ENST00000529424 324 ntTSL 222.96■■□□□ 1.274e-7■■■■■ 47.4
PABPN1Q86U42 KIAA0895L-207ENST00000563918 798 ntTSL 236.25■■■■□ 3.395e-13■■■■■ 46.7
PABPN1Q86U42 KIAA0895L-211ENST00000568563 1977 ntTSL 533.84■■■■□ 3.015e-13■■■■■ 46.7
PABPN1Q86U42 KIAA0895L-203ENST00000561679 2824 ntTSL 225.33■■□□□ 1.655e-13■■■■■ 46.7
PABPN1Q86U42 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC22.46■■□□□ 1.195e-13■■■■■ 46.7
PABPN1Q86U42 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.715e-13■■■■■ 46.7
PABPN1Q86U42 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)27.01■■□□□ 1.911e-9■■■■■ 46.5
PABPN1Q86U42 ACAP3-207ENST00000470659 421 ntTSL 334.13■■■■□ 3.054e-15■■■■■ 46.4
PABPN1Q86U42 ACADVL-235ENST00000583848 503 ntTSL 326.67■■□□□ 1.863e-18■■■■■ 46.2
PABPN1Q86U42 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.391e-9■■■■■ 45.6
PABPN1Q86U42 LIG1-210ENST00000596332 584 ntTSL 220.51■□□□□ 0.871e-12■■■■■ 45.6
PABPN1Q86U42 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC25.08■■□□□ 1.611e-7■■■■■ 44.2
PABPN1Q86U42 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.471e-7■■■■■ 44.2
PABPN1Q86U42 RECQL4-201ENST00000301323 781 ntTSL 333.39■■■□□ 2.943e-7■■■■■ 43
PABPN1Q86U42 VPS16-206ENST00000466415 708 ntTSL 222.05■■□□□ 1.125e-7■■■■■ 42.4
PABPN1Q86U42 CHTF18-218ENST00000569270 711 ntTSL 540.03■■■■■ 41e-11■■■■■ 42.3
PABPN1Q86U42 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51e-11■■■■■ 42.3
PABPN1Q86U42 RCN1-207ENST00000531345 2653 ntTSL 212.86□□□□□ -0.351e-11■■■■■ 42.3
PABPN1Q86U42 RCN1-211ENST00000533898 2416 ntTSL 28.06□□□□□ -1.121e-11■■■■■ 42.3
PABPN1Q86U42 RCN1-204ENST00000528630 549 ntTSL 37.61□□□□□ -1.191e-11■■■■■ 42.3
PABPN1Q86U42 RASSF1-207ENST00000482447 1711 ntTSL 1 (best)41.27■■■■■ 4.24e-12■■■■■ 42.1
PABPN1Q86U42 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC36.04■■■■□ 3.364e-12■■■■■ 42.1
PABPN1Q86U42 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC34.54■■■■□ 3.124e-12■■■■■ 42.1
PABPN1Q86U42 RASSF1-204ENST00000395117 1745 ntTSL 234.37■■■■□ 3.094e-12■■■■■ 42.1
PABPN1Q86U42 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.834e-12■■■■■ 42.1
PABPN1Q86U42 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC31.42■■■□□ 2.624e-12■■■■■ 42.1
PABPN1Q86U42 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC29.13■■■□□ 2.254e-12■■■■■ 42.1
PABPN1Q86U42 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC28.2■■■□□ 2.118e-8■■■■■ 41.9
PABPN1Q86U42 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC21.63■■□□□ 1.058e-8■■■■■ 41.9
PABPN1Q86U42 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC20.29■□□□□ 0.848e-8■■■■■ 41.9
PABPN1Q86U42 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.338e-8■■■■■ 41.9
PABPN1Q86U42 UBR4-215ENST00000492606 314 ntTSL 310.77□□□□□ -0.692e-26■■■■■ 41.9
PABPN1Q86U42 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.351e-10■■■■■ 41
PABPN1Q86U42 DDX39A-206ENST00000587730 1813 ntTSL 1 (best)29.61■■■□□ 2.331e-10■■■■■ 41
PABPN1Q86U42 DDX39A-208ENST00000588692 1478 ntTSL 529.21■■■□□ 2.271e-10■■■■■ 41
PABPN1Q86U42 DDX39A-209ENST00000589318 1903 ntTSL 1 (best)26.97■■□□□ 1.911e-10■■■■■ 41
PABPN1Q86U42 DDX39A-202ENST00000324340 1355 ntTSL 1 (best)23.04■■□□□ 1.281e-10■■■■■ 41
PABPN1Q86U42 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC45.12■■■■■ 4.811e-15■■■■■ 40.8
PABPN1Q86U42 CYC1-204ENST00000533444 1832 ntTSL 1 (best)44.85■■■■■ 4.771e-15■■■■■ 40.8
PABPN1Q86U42 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.964e-11■■■■■ 40
PABPN1Q86U42 RAD9A-205ENST00000538013 924 ntTSL 539.35■■■■□ 3.894e-11■■■■■ 40
PABPN1Q86U42 RAD9A-209ENST00000544620 829 ntTSL 338.47■■■■□ 3.754e-11■■■■■ 40
PABPN1Q86U42 STIP1-210ENST00000540887 877 ntTSL 230.1■■■□□ 2.414e-11■■■■■ 40
PABPN1Q86U42 RAD9A-204ENST00000535644 1624 ntTSL 329.59■■■□□ 2.334e-11■■■■■ 40
PABPN1Q86U42 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.854e-11■■■■■ 40
PABPN1Q86U42 RAD9A-202ENST00000529100 1037 ntTSL 326.04■■□□□ 1.764e-11■■■■■ 40
PABPN1Q86U42 STIP1-204ENST00000536973 738 ntTSL 525.97■■□□□ 1.754e-11■■■■■ 40
PABPN1Q86U42 RAD9A-203ENST00000530934 1256 ntTSL 225.38■■□□□ 1.654e-11■■■■■ 40
PABPN1Q86U42 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC23.8■■□□□ 1.44e-11■■■■■ 40
PABPN1Q86U42 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC22.74■■□□□ 1.234e-11■■■■■ 40
PABPN1Q86U42 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.792e-10■■■■■ 39.9
PABPN1Q86U42 AC087289.3-201ENST00000590947 1886 ntAPPRIS ALT2 TSL 228.7■■■□□ 2.182e-10■■■■■ 39.9
PABPN1Q86U42 MRPL38-212ENST00000486101 767 ntTSL 227.36■■□□□ 1.972e-10■■■■■ 39.9
PABPN1Q86U42 MRPL38-217ENST00000588620 498 ntTSL 325.75■■□□□ 1.712e-10■■■■■ 39.9
PABPN1Q86U42 MRPL38-211ENST00000483393 525 ntTSL 219.39■□□□□ 0.692e-10■■■■■ 39.9
PABPN1Q86U42 AC087289.3-202ENST00000593156 4270 ntTSL 218.38■□□□□ 0.532e-10■■■■■ 39.9
PABPN1Q86U42 MRPL38-210ENST00000480203 534 ntTSL 318.2■□□□□ 0.52e-10■■■■■ 39.9
PABPN1Q86U42 ACADVL-215ENST00000578809 709 ntTSL 228.76■■■□□ 2.191e-15■■■■■ 39.9
PABPN1Q86U42 ACADVL-211ENST00000578319 718 ntTSL 327.12■■□□□ 1.931e-15■■■■■ 39.9
PABPN1Q86U42 ACADVL-232ENST00000583074 410 ntTSL 535.96■■■■□ 3.351e-15■■■■■ 39.2
PABPN1Q86U42 RECQL4-204ENST00000531875 988 ntTSL 534.36■■■■□ 3.093e-7■■■■■ 39
PABPN1Q86U42 ACADVL-218ENST00000579391 341 ntTSL 231.3■■■□□ 2.62e-15■■■■■ 39
PABPN1Q86U42 POLE-216ENST00000541213 1675 ntTSL 340.68■■■■■ 4.18e-11■■■■■ 38.9
PABPN1Q86U42 POLE-219ENST00000544414 575 ntTSL 238.16■■■■□ 3.78e-11■■■■■ 38.9
PABPN1Q86U42 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC27.53■■■□□ 28e-11■■■■■ 38.9
PABPN1Q86U42 FASTK-213ENST00000482806 1826 ntTSL 541■■■■■ 4.151e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC40.72■■■■■ 4.111e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-215ENST00000489884 1751 ntTSL 1 (best)40.26■■■■■ 4.041e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC39.24■■■■□ 3.871e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-214ENST00000483953 1178 ntTSL 538.59■■■■□ 3.771e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-206ENST00000465272 457 ntTSL 238.59■■■■□ 3.771e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.351e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-203ENST00000459800 449 ntTSL 235.17■■■■□ 3.221e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-209ENST00000469237 1904 ntTSL 533.98■■■■□ 3.031e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-207ENST00000466855 1894 ntTSL 533.73■■■□□ 2.991e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC33.52■■■□□ 2.961e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-204ENST00000460980 1521 ntTSL 530.28■■■□□ 2.441e-10■■■■■ 38.8
PABPN1Q86U42 FASTK-208ENST00000467237 3011 ntTSL 1 (best)23.46■■□□□ 1.351e-10■■■■■ 38.8
PABPN1Q86U42 RECQL4-208ENST00000534626 1165 ntTSL 534.73■■■■□ 3.153e-9■■■■■ 38.4
PABPN1Q86U42 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.681e-6■■■■■ 38.4
Retrieved 100 of 8,254 protein–RNA pairs in 35.3 ms