Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 TRO-221ENST00000475183 632 ntTSL 313.54□□□□□ -0.243e-18■□□□□ 11
DKC1O60832 TRO-215ENST00000445561 2597 ntTSL 1 (best)13.39□□□□□ -0.273e-18■□□□□ 11
DKC1O60832 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.283e-18■□□□□ 11
DKC1O60832 TRO-224ENST00000492706 3677 ntTSL 212.53□□□□□ -0.43e-18■□□□□ 11
DKC1O60832 TRO-219ENST00000469211 842 ntTSL 210.79□□□□□ -0.683e-18■□□□□ 11
DKC1O60832 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.693e-18■□□□□ 11
DKC1O60832 TRO-208ENST00000420798 3613 ntTSL 2 BASIC10.45□□□□□ -0.743e-18■□□□□ 11
DKC1O60832 SNORA11.4-201ENST00000408823 129 ntBASIC2.45□□□□□ -2.023e-18■□□□□ 11
DKC1O60832 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.07■□□□□ 0.164e-7■□□□□ 11
DKC1O60832 MRPL48-214ENST00000544819 742 ntTSL 214.61□□□□□ -0.074e-7■□□□□ 11
DKC1O60832 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.124e-7■□□□□ 11
DKC1O60832 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC13.74□□□□□ -0.214e-7■□□□□ 11
DKC1O60832 MRPL48-213ENST00000544140 996 ntTSL 213.5□□□□□ -0.254e-7■□□□□ 11
DKC1O60832 MRPL48-209ENST00000540162 1004 ntTSL 512.91□□□□□ -0.344e-7■□□□□ 11
DKC1O60832 MRPL48-206ENST00000508278 1560 ntTSL 212.16□□□□□ -0.464e-7■□□□□ 11
DKC1O60832 MRPL48-202ENST00000314282 1922 ntTSL 1 (best) BASIC10.7□□□□□ -0.74e-7■□□□□ 11
DKC1O60832 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC10.18□□□□□ -0.784e-7■□□□□ 11
DKC1O60832 MRPL48-211ENST00000543058 699 ntTSL 33.58□□□□□ -1.844e-7■□□□□ 11
DKC1O60832 SNORD1C-201ENST00000363315 78 ntBASIC6.62□□□□□ -1.352e-19■□□□□ 11
DKC1O60832 SNHG14-211ENST00000547292 626 ntTSL 5 BASIC12.08□□□□□ -0.481e-323■□□□□ 10.9
DKC1O60832 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.02□□□□□ -1.131e-323■□□□□ 10.9
DKC1O60832 SNORD116-1-201ENST00000384335 95 ntBASIC2.34□□□□□ -2.031e-323■□□□□ 10.9
DKC1O60832 SNHG5-204ENST00000425170 489 ntTSL 26.44□□□□□ -1.381e-323■□□□□ 10.9
DKC1O60832 SNORD50B-201ENST00000364995 70 ntBASIC0.98□□□□□ -2.251e-323■□□□□ 10.9
DKC1O60832 SNORD88C-201ENST00000408061 91 ntBASIC11.55□□□□□ -0.561e-323■□□□□ 10.8
DKC1O60832 C19orf48-214ENST00000602125 292 ntTSL 55.37□□□□□ -1.551e-323■□□□□ 10.8
DKC1O60832 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.83■□□□□ 0.775e-17■□□□□ 10.8
DKC1O60832 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.97■□□□□ 0.635e-17■□□□□ 10.8
DKC1O60832 GARNL3-215ENST00000478702 577 ntTSL 417.65■□□□□ 0.428e-6■□□□□ 10.8
DKC1O60832 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.04■□□□□ 0.325e-17■□□□□ 10.8
DKC1O60832 GARNL3-204ENST00000429629 694 ntTSL 516.85■□□□□ 0.298e-6■□□□□ 10.8
DKC1O60832 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.63■□□□□ 0.255e-17■□□□□ 10.8
DKC1O60832 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.76■□□□□ 0.116e-7■□□□□ 10.8
DKC1O60832 GARNL3-206ENST00000439286 905 ntTSL 515.22■□□□□ 0.038e-6■□□□□ 10.8
DKC1O60832 SNHG15-204ENST00000579383 731 ntTSL 215.21■□□□□ 0.035e-17■□□□□ 10.8
DKC1O60832 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.18■□□□□ 0.025e-17■□□□□ 10.8
DKC1O60832 GARNL3-208ENST00000444677 667 ntTSL 415.14■□□□□ 0.018e-6■□□□□ 10.8
DKC1O60832 GARNL3-210ENST00000453030 536 ntTSL 413.05□□□□□ -0.328e-6■□□□□ 10.8
DKC1O60832 SNHG15-208ENST00000584327 505 ntTSL 3 BASIC12.59□□□□□ -0.395e-17■□□□□ 10.8
DKC1O60832 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC12.54□□□□□ -0.45e-17■□□□□ 10.8
DKC1O60832 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC12.39□□□□□ -0.435e-17■□□□□ 10.8
DKC1O60832 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC12.31□□□□□ -0.445e-17■□□□□ 10.8
DKC1O60832 GARNL3-219ENST00000495172 737 ntTSL 49.57□□□□□ -0.888e-6■□□□□ 10.8
DKC1O60832 GARNL3-201ENST00000373386 3143 ntTSL 28.54□□□□□ -1.048e-6■□□□□ 10.8
DKC1O60832 GARNL3-222ENST00000498801 578 ntTSL 48.19□□□□□ -1.18e-6■□□□□ 10.8
DKC1O60832 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.158e-6■□□□□ 10.8
DKC1O60832 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.75□□□□□ -1.178e-6■□□□□ 10.8
DKC1O60832 GARNL3-203ENST00000425970 831 ntTSL 44.44□□□□□ -1.78e-6■□□□□ 10.8
DKC1O60832 GARNL3-207ENST00000441134 653 ntTSL 43.55□□□□□ -1.848e-6■□□□□ 10.8
DKC1O60832 SNORA9-201ENST00000384215 133 ntBASIC3.54□□□□□ -1.845e-17■□□□□ 10.8
DKC1O60832 GARNL3-213ENST00000464616 549 ntTSL 53.09□□□□□ -1.918e-6■□□□□ 10.8
DKC1O60832 LRBA-211ENST00000513021 568 ntTSL 410.2□□□□□ -0.784e-6■□□□□ 10.8
DKC1O60832 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.9□□□□□ -0.994e-6■□□□□ 10.8
DKC1O60832 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.074e-6■□□□□ 10.8
DKC1O60832 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.174e-6■□□□□ 10.8
DKC1O60832 LRBA-207ENST00000509835 5578 ntTSL 1 (best)7.48□□□□□ -1.214e-6■□□□□ 10.8
DKC1O60832 LRBA-203ENST00000503716 3712 ntTSL 1 (best)6.27□□□□□ -1.414e-6■□□□□ 10.8
DKC1O60832 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.98■■□□□ 1.433e-17■□□□□ 10.7
DKC1O60832 SORBS3-202ENST00000517500 1228 ntTSL 223.91■■□□□ 1.422e-12■□□□□ 10.7
DKC1O60832 AFF1-206ENST00000507468 1486 ntTSL 1 (best)23.49■■□□□ 1.351e-5■□□□□ 10.7
DKC1O60832 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.151e-5■□□□□ 10.7
DKC1O60832 SOD2-212ENST00000540491 454 ntTSL 321.66■■□□□ 1.063e-7■□□□□ 10.7
DKC1O60832 WDR20-213ENST00000557485 491 ntTSL 321.52■■□□□ 1.041e-5■□□□□ 10.7
DKC1O60832 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.46■■□□□ 1.033e-17■□□□□ 10.7
DKC1O60832 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.22■□□□□ 0.991e-5■□□□□ 10.7
DKC1O60832 TLE3-217ENST00000559574 325 ntTSL 521.07■□□□□ 0.963e-17■□□□□ 10.7
DKC1O60832 SORBS3-203ENST00000517535 3067 ntTSL 221.01■□□□□ 0.952e-12■□□□□ 10.7
DKC1O60832 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.943e-17■□□□□ 10.7
DKC1O60832 WDR20-209ENST00000556094 785 ntTSL 320.25■□□□□ 0.831e-5■□□□□ 10.7
DKC1O60832 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.823e-17■□□□□ 10.7
DKC1O60832 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.78■□□□□ 0.763e-7■□□□□ 10.7
DKC1O60832 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.711e-5■□□□□ 10.7
DKC1O60832 AC079781.5-201ENST00000641390 3211 nt19.1■□□□□ 0.651e-5■□□□□ 10.7
DKC1O60832 AFF1-204ENST00000503477 1478 ntTSL 218.77■□□□□ 0.61e-5■□□□□ 10.7
DKC1O60832 AC004967.1-201ENST00000453589 447 ntBASIC18.73■□□□□ 0.591e-5■□□□□ 10.7
DKC1O60832 AFF1-205ENST00000504956 1668 ntTSL 217.74■□□□□ 0.431e-5■□□□□ 10.7
DKC1O60832 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.69■□□□□ 0.421e-5■□□□□ 10.7
DKC1O60832 HINT1-206ENST00000508495 825 ntTSL 1 (best)17.68■□□□□ 0.421e-5■□□□□ 10.7
DKC1O60832 HINT1-209ENST00000513345 656 ntTSL 217.62■□□□□ 0.411e-5■□□□□ 10.7
DKC1O60832 SORBS3-217ENST00000523402 889 ntTSL 317.62■□□□□ 0.412e-12■□□□□ 10.7
DKC1O60832 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.6■□□□□ 0.411e-5■□□□□ 10.7
DKC1O60832 SOD2-209ENST00000535561 551 ntTSL 316.34■□□□□ 0.213e-7■□□□□ 10.7
DKC1O60832 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.34■□□□□ 0.211e-5■□□□□ 10.7
DKC1O60832 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.33■□□□□ 0.21e-5■□□□□ 10.7
DKC1O60832 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.84■□□□□ 0.131e-5■□□□□ 10.7
DKC1O60832 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)15.72■□□□□ 0.111e-5■□□□□ 10.7
DKC1O60832 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.62■□□□□ 0.091e-5■□□□□ 10.7
DKC1O60832 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.6■□□□□ 0.091e-5■□□□□ 10.7
DKC1O60832 PHF21A-211ENST00000529734 557 ntTSL 415.47■□□□□ 0.071e-5■□□□□ 10.7
DKC1O60832 AC079781.5-202ENST00000641784 3743 ntBASIC15.47■□□□□ 0.071e-5■□□□□ 10.7
DKC1O60832 HINT1-204ENST00000506908 681 ntTSL 2 BASIC15.1■□□□□ 0.011e-5■□□□□ 10.7
DKC1O60832 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.011e-5■□□□□ 10.7
DKC1O60832 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.88□□□□□ -0.031e-5■□□□□ 10.7
DKC1O60832 TLE3-225ENST00000561453 3719 ntTSL 514.67□□□□□ -0.063e-17■□□□□ 10.7
DKC1O60832 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.48□□□□□ -0.093e-7■□□□□ 10.7
DKC1O60832 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-17■□□□□ 10.7
DKC1O60832 SOD2-204ENST00000401980 523 ntTSL 414.17□□□□□ -0.143e-7■□□□□ 10.7
DKC1O60832 CCNC-216ENST00000523961 1152 ntTSL 514.08□□□□□ -0.161e-5■□□□□ 10.7
DKC1O60832 MDH2-202ENST00000424167 681 ntTSL 213.96□□□□□ -0.171e-5■□□□□ 10.7
DKC1O60832 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC13.83□□□□□ -0.21e-5■□□□□ 10.7
Retrieved 100 of 8,567 protein–RNA pairs in 173.5 ms