RNA–Protein interactions for RNA: ENST00000556807.1

WDR20-211, Transcript of WD repeat domain 20, humanhuman

TSL 1 (best) BASIC

Gene WDR20, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR20-211ENST00000556807 NISCHQ9Y2I1 1504 aa34.43■■■■□ 3.1
WDR20-211ENST00000556807 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
WDR20-211ENST00000556807 CCDC180Q9P1Z9 1646 aa29.26■■■□□ 2.27
WDR20-211ENST00000556807 ZCCHC6Q5VYS8 1495 aaKnown RBP29.16■■■□□ 2.26
WDR20-211ENST00000556807 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
WDR20-211ENST00000556807 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
WDR20-211ENST00000556807 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
WDR20-211ENST00000556807 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
WDR20-211ENST00000556807 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
WDR20-211ENST00000556807 ABCC9O60706 1549 aa27.52■■■□□ 2
WDR20-211ENST00000556807 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
WDR20-211ENST00000556807 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.96
WDR20-211ENST00000556807 HRCP23327 699 aa27.23■■□□□ 1.95
WDR20-211ENST00000556807 LOC105371045A0A1W2PR82 267 aa27.17■■□□□ 1.94
WDR20-211ENST00000556807 PCGF6Q9BYE7 350 aa27.15■■□□□ 1.94
WDR20-211ENST00000556807 NACADO15069 1562 aa27.03■■□□□ 1.92
WDR20-211ENST00000556807 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
WDR20-211ENST00000556807 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
WDR20-211ENST00000556807 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
WDR20-211ENST00000556807 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
WDR20-211ENST00000556807 TRIM26Q12899 539 aaPredicted RBP26.65■■□□□ 1.86
WDR20-211ENST00000556807 PPARGC1BQ86YN6 1023 aaKnown RBP26.64■■□□□ 1.85
WDR20-211ENST00000556807 WIZO95785 1651 aa26.62■■□□□ 1.85
WDR20-211ENST00000556807 FAM9AQ8IZU1 332 aaPredicted RBP26.55■■□□□ 1.84
WDR20-211ENST00000556807 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
WDR20-211ENST00000556807 EIF4G1Q04637 1599 aaKnown RBP26.34■■□□□ 1.81
WDR20-211ENST00000556807 EHMT2Q96KQ7 1210 aa26.3■■□□□ 1.8
WDR20-211ENST00000556807 UNC13AQ9UPW8 1703 aa26.26■■□□□ 1.79
WDR20-211ENST00000556807 TOP2AP11388 1531 aaKnown RBP26.22■■□□□ 1.79
WDR20-211ENST00000556807 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
WDR20-211ENST00000556807 CCDC88BA6NC98 1476 aa26.1■■□□□ 1.77
WDR20-211ENST00000556807 SMARCA2P51531 1590 aa26.08■■□□□ 1.77
WDR20-211ENST00000556807 ZEB1P37275 1124 aaPredicted RBP26.07■■□□□ 1.76
WDR20-211ENST00000556807 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
WDR20-211ENST00000556807 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
WDR20-211ENST00000556807 BICRAQ9NZM4 1560 aa25.89■■□□□ 1.73
WDR20-211ENST00000556807 SOGA1O94964 1423 aa25.8■■□□□ 1.72
WDR20-211ENST00000556807 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
WDR20-211ENST00000556807 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.711e-6■■■■■ 58.5
WDR20-211ENST00000556807 CEP162Q5TB80 1403 aa25.7■■□□□ 1.71
WDR20-211ENST00000556807 EEA1Q15075 1411 aa25.68■■□□□ 1.7
WDR20-211ENST00000556807 RUSC2Q8N2Y8 1516 aa25.67■■□□□ 1.7
WDR20-211ENST00000556807 TNIKQ9UKE5 1360 aa25.67■■□□□ 1.7
WDR20-211ENST00000556807 CSRNP3Q8WYN3 585 aa25.63■■□□□ 1.69
WDR20-211ENST00000556807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.58■■□□□ 1.68
WDR20-211ENST00000556807 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
WDR20-211ENST00000556807 GOLGA3Q08378 1498 aa25.51■■□□□ 1.67
WDR20-211ENST00000556807 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
WDR20-211ENST00000556807 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
WDR20-211ENST00000556807 CCER1Q8TC90 406 aaPredicted RBP25.48■■□□□ 1.67
WDR20-211ENST00000556807 TTBK1Q5TCY1 1321 aaPredicted RBP25.47■■□□□ 1.67
WDR20-211ENST00000556807 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
WDR20-211ENST00000556807 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
WDR20-211ENST00000556807 KIF21BO75037 1637 aa25.35■■□□□ 1.65
WDR20-211ENST00000556807 CLIP1P30622 1438 aa25.21■■□□□ 1.63
WDR20-211ENST00000556807 RAPGEF2Q9Y4G8 1499 aa25.18■■□□□ 1.62
WDR20-211ENST00000556807 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
WDR20-211ENST00000556807 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
WDR20-211ENST00000556807 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
WDR20-211ENST00000556807 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
WDR20-211ENST00000556807 HMGXB3Q12766 1538 aa25.04■■□□□ 1.6
WDR20-211ENST00000556807 DIEXFQ68CQ4 756 aaKnown RBP25.02■■□□□ 1.6
WDR20-211ENST00000556807 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
WDR20-211ENST00000556807 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
WDR20-211ENST00000556807 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.59
WDR20-211ENST00000556807 PRXQ9BXM0 1461 aa24.95■■□□□ 1.58
WDR20-211ENST00000556807 ERICH3Q5RHP9 1530 aa24.94■■□□□ 1.58
WDR20-211ENST00000556807 APLP2Q06481 763 aa24.92■■□□□ 1.58
WDR20-211ENST00000556807 CUX1P39880 1505 aa24.92■■□□□ 1.58
WDR20-211ENST00000556807 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
WDR20-211ENST00000556807 ACIN1Q9UKV3 1341 aaKnown RBP24.85■■□□□ 1.57
WDR20-211ENST00000556807 CFTRP13569 1480 aa24.85■■□□□ 1.57
WDR20-211ENST00000556807 ZNF316A6NFI3 1004 aaPredicted RBP24.85■■□□□ 1.57
WDR20-211ENST00000556807 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
WDR20-211ENST00000556807 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
WDR20-211ENST00000556807 KIF27Q86VH2 1401 aa24.79■■□□□ 1.56
WDR20-211ENST00000556807 CENPBP07199 599 aaPredicted RBP24.67■■□□□ 1.54
WDR20-211ENST00000556807 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
WDR20-211ENST00000556807 PRDM2Q13029 1718 aa24.64■■□□□ 1.53
WDR20-211ENST00000556807 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
WDR20-211ENST00000556807 RRBP1Q9P2E9 1410 aaKnown RBP24.55■■□□□ 1.52
WDR20-211ENST00000556807 DHX57Q6P158 1386 aaKnown RBP24.55■■□□□ 1.52
WDR20-211ENST00000556807 GTF3C3Q9Y5Q9 886 aa24.54■■□□□ 1.52
WDR20-211ENST00000556807 CUX2O14529 1486 aa24.54■■□□□ 1.52
WDR20-211ENST00000556807 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
WDR20-211ENST00000556807 IGF1RP08069 1367 aa24.53■■□□□ 1.52
WDR20-211ENST00000556807 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
WDR20-211ENST00000556807 MIER1Q8N108 512 aa24.5■■□□□ 1.51
WDR20-211ENST00000556807 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
WDR20-211ENST00000556807 CC2D2AQ9P2K1 1620 aa24.45■■□□□ 1.5
WDR20-211ENST00000556807 CCNB3Q8WWL7 1395 aa24.43■■□□□ 1.5
WDR20-211ENST00000556807 CARMIL1Q5VZK9 1371 aa24.41■■□□□ 1.5
WDR20-211ENST00000556807 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
WDR20-211ENST00000556807 TIAM1Q13009 1591 aa24.35■■□□□ 1.49
WDR20-211ENST00000556807 MAP3K1Q13233 1512 aa24.33■■□□□ 1.48
WDR20-211ENST00000556807 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
WDR20-211ENST00000556807 ITGAEP38570 1179 aa24.27■■□□□ 1.48
WDR20-211ENST00000556807 LRRC9Q6ZRR7 1453 aa24.25■■□□□ 1.47
WDR20-211ENST00000556807 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
WDR20-211ENST00000556807 RAB3GAP2Q9H2M9 1393 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms