RNA–Protein interactions for RNA: ENST00000335263.9

WDR20-203, Transcript of WD repeat domain 20, humanhuman

TSL 1 (best) BASIC

Gene WDR20, Length 2,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR20-203ENST00000335263 NISCHQ9Y2I1 1504 aa30.35■■■□□ 2.45
WDR20-203ENST00000335263 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
WDR20-203ENST00000335263 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
WDR20-203ENST00000335263 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
WDR20-203ENST00000335263 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.69
WDR20-203ENST00000335263 DCAF8L2P0C7V8 631 aa25.36■■□□□ 1.65
WDR20-203ENST00000335263 MYO15BQ96JP2 1530 aa25.23■■□□□ 1.63
WDR20-203ENST00000335263 HRCP23327 699 aa25.21■■□□□ 1.63
WDR20-203ENST00000335263 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
WDR20-203ENST00000335263 PCGF6Q9BYE7 350 aa24.95■■□□□ 1.58
WDR20-203ENST00000335263 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
WDR20-203ENST00000335263 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
WDR20-203ENST00000335263 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
WDR20-203ENST00000335263 ABCC9O60706 1549 aa24.25■■□□□ 1.47
WDR20-203ENST00000335263 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
WDR20-203ENST00000335263 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
WDR20-203ENST00000335263 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
WDR20-203ENST00000335263 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.42
WDR20-203ENST00000335263 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
WDR20-203ENST00000335263 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
WDR20-203ENST00000335263 FAM9AQ8IZU1 332 aaPredicted RBP23.78■■□□□ 1.4
WDR20-203ENST00000335263 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
WDR20-203ENST00000335263 NACADO15069 1562 aa23.72■■□□□ 1.39
WDR20-203ENST00000335263 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
WDR20-203ENST00000335263 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
WDR20-203ENST00000335263 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
WDR20-203ENST00000335263 WIZO95785 1651 aa23.54■■□□□ 1.36
WDR20-203ENST00000335263 PELP1Q8IZL8 1130 aaKnown RBP23.54■■□□□ 1.36
WDR20-203ENST00000335263 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
WDR20-203ENST00000335263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
WDR20-203ENST00000335263 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
WDR20-203ENST00000335263 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
WDR20-203ENST00000335263 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
WDR20-203ENST00000335263 NEUROD1Q13562 356 aa23.15■■□□□ 1.3
WDR20-203ENST00000335263 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
WDR20-203ENST00000335263 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
WDR20-203ENST00000335263 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
WDR20-203ENST00000335263 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.28
WDR20-203ENST00000335263 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
WDR20-203ENST00000335263 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
WDR20-203ENST00000335263 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
WDR20-203ENST00000335263 SMARCA2P51531 1590 aa23.01■■□□□ 1.27
WDR20-203ENST00000335263 GTF3C3Q9Y5Q9 886 aa22.96■■□□□ 1.27
WDR20-203ENST00000335263 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
WDR20-203ENST00000335263 SOGA1O94964 1423 aa22.91■■□□□ 1.26
WDR20-203ENST00000335263 CENPBP07199 599 aaPredicted RBP22.88■■□□□ 1.25
WDR20-203ENST00000335263 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.241e-6■■■■■ 58.5
WDR20-203ENST00000335263 RUSC2Q8N2Y8 1516 aa22.81■■□□□ 1.24
WDR20-203ENST00000335263 CEP162Q5TB80 1403 aa22.81■■□□□ 1.24
WDR20-203ENST00000335263 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
WDR20-203ENST00000335263 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
WDR20-203ENST00000335263 UBTFP17480 764 aaKnown RBP22.73■■□□□ 1.23
WDR20-203ENST00000335263 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
WDR20-203ENST00000335263 ZNF316A6NFI3 1004 aaPredicted RBP22.67■■□□□ 1.22
WDR20-203ENST00000335263 EEA1Q15075 1411 aa22.64■■□□□ 1.22
WDR20-203ENST00000335263 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
WDR20-203ENST00000335263 GOLGA3Q08378 1498 aa22.57■■□□□ 1.2
WDR20-203ENST00000335263 PEG3Q9GZU2 1588 aa22.57■■□□□ 1.2
WDR20-203ENST00000335263 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
WDR20-203ENST00000335263 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
WDR20-203ENST00000335263 MIER1Q8N108 512 aa22.5■■□□□ 1.19
WDR20-203ENST00000335263 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
WDR20-203ENST00000335263 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.19
WDR20-203ENST00000335263 MYT1Q01538 1121 aa22.43■■□□□ 1.18
WDR20-203ENST00000335263 CEP164Q9UPV0 1460 aa22.42■■□□□ 1.18
WDR20-203ENST00000335263 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
WDR20-203ENST00000335263 CLIP1P30622 1438 aa22.36■■□□□ 1.17
WDR20-203ENST00000335263 KIF21BO75037 1637 aa22.35■■□□□ 1.17
WDR20-203ENST00000335263 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
WDR20-203ENST00000335263 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
WDR20-203ENST00000335263 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
WDR20-203ENST00000335263 APLP2Q06481 763 aa22.18■■□□□ 1.14
WDR20-203ENST00000335263 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
WDR20-203ENST00000335263 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
WDR20-203ENST00000335263 CUX1P39880 1505 aa22.01■■□□□ 1.11
WDR20-203ENST00000335263 DHX57Q6P158 1386 aaKnown RBP22■■□□□ 1.11
WDR20-203ENST00000335263 NCAPD3P42695 1498 aa22■■□□□ 1.11
WDR20-203ENST00000335263 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
WDR20-203ENST00000335263 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
WDR20-203ENST00000335263 ERICH3Q5RHP9 1530 aa21.97■■□□□ 1.11
WDR20-203ENST00000335263 KANK4Q5T7N3 995 aaPredicted RBP21.96■■□□□ 1.11
WDR20-203ENST00000335263 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
WDR20-203ENST00000335263 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
WDR20-203ENST00000335263 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
WDR20-203ENST00000335263 CFTRP13569 1480 aa21.88■■□□□ 1.09
WDR20-203ENST00000335263 ARHGAP35Q9NRY4 1499 aa21.78■■□□□ 1.08
WDR20-203ENST00000335263 TSHZ2Q9NRE2 1034 aa21.76■■□□□ 1.07
WDR20-203ENST00000335263 KCNH8Q96L42 1107 aa21.74■■□□□ 1.07
WDR20-203ENST00000335263 ITGAEP38570 1179 aa21.74■■□□□ 1.07
WDR20-203ENST00000335263 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
WDR20-203ENST00000335263 CUX2O14529 1486 aa21.73■■□□□ 1.07
WDR20-203ENST00000335263 IGF1RP08069 1367 aa21.7■■□□□ 1.06
WDR20-203ENST00000335263 CCNB3Q8WWL7 1395 aa21.67■■□□□ 1.06
WDR20-203ENST00000335263 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.05
WDR20-203ENST00000335263 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
WDR20-203ENST00000335263 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
WDR20-203ENST00000335263 BCANQ96GW7 911 aa21.6■■□□□ 1.05
WDR20-203ENST00000335263 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
WDR20-203ENST00000335263 RAB3GAP2Q9H2M9 1393 aa21.57■■□□□ 1.04
WDR20-203ENST00000335263 MAPKBP1O60336 1514 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms