RNA–Protein interactions for RNA: ENST00000513021.1

LRBA-211, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 4

Gene LRBA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-211ENST00000513021 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
LRBA-211ENST00000513021 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
LRBA-211ENST00000513021 ABCC9O60706 1549 aa18.65■□□□□ 0.58
LRBA-211ENST00000513021 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
LRBA-211ENST00000513021 NACADO15069 1562 aa18.08■□□□□ 0.48
LRBA-211ENST00000513021 DCAF8L2P0C7V8 631 aa18.07■□□□□ 0.48
LRBA-211ENST00000513021 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
LRBA-211ENST00000513021 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
LRBA-211ENST00000513021 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
LRBA-211ENST00000513021 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
LRBA-211ENST00000513021 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
LRBA-211ENST00000513021 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.39
LRBA-211ENST00000513021 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
LRBA-211ENST00000513021 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
LRBA-211ENST00000513021 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
LRBA-211ENST00000513021 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
LRBA-211ENST00000513021 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
LRBA-211ENST00000513021 CC2D2AQ9P2K1 1620 aa16.9■□□□□ 0.3
LRBA-211ENST00000513021 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
LRBA-211ENST00000513021 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.29
LRBA-211ENST00000513021 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
LRBA-211ENST00000513021 ATAD2BQ9ULI0 1458 aa16.72■□□□□ 0.27
LRBA-211ENST00000513021 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
LRBA-211ENST00000513021 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
LRBA-211ENST00000513021 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
LRBA-211ENST00000513021 WIZO95785 1651 aa16.67■□□□□ 0.26
LRBA-211ENST00000513021 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
LRBA-211ENST00000513021 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
LRBA-211ENST00000513021 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
LRBA-211ENST00000513021 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
LRBA-211ENST00000513021 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
LRBA-211ENST00000513021 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
LRBA-211ENST00000513021 NESP48681 1621 aa16.23■□□□□ 0.19
LRBA-211ENST00000513021 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.18
LRBA-211ENST00000513021 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
LRBA-211ENST00000513021 CFTRP13569 1480 aa16.15■□□□□ 0.18
LRBA-211ENST00000513021 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
LRBA-211ENST00000513021 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
LRBA-211ENST00000513021 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
LRBA-211ENST00000513021 ERCC6Q03468 1493 aa16.05■□□□□ 0.16
LRBA-211ENST00000513021 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
LRBA-211ENST00000513021 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
LRBA-211ENST00000513021 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.14
LRBA-211ENST00000513021 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
LRBA-211ENST00000513021 WDR62O43379 1518 aa15.87■□□□□ 0.13
LRBA-211ENST00000513021 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
LRBA-211ENST00000513021 DNMBPQ6XZF7 1577 aa15.81■□□□□ 0.12
LRBA-211ENST00000513021 TOPBP1Q92547 1522 aa15.8■□□□□ 0.12
LRBA-211ENST00000513021 CUX2O14529 1486 aa15.8■□□□□ 0.12
LRBA-211ENST00000513021 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
LRBA-211ENST00000513021 CUX1P39880 1505 aa15.78■□□□□ 0.12
LRBA-211ENST00000513021 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
LRBA-211ENST00000513021 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
LRBA-211ENST00000513021 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.11
LRBA-211ENST00000513021 TOP2BQ02880 1626 aa15.7■□□□□ 0.1
LRBA-211ENST00000513021 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
LRBA-211ENST00000513021 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
LRBA-211ENST00000513021 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
LRBA-211ENST00000513021 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
LRBA-211ENST00000513021 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
LRBA-211ENST00000513021 SOGA1O94964 1423 aa15.59■□□□□ 0.09
LRBA-211ENST00000513021 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
LRBA-211ENST00000513021 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
LRBA-211ENST00000513021 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
LRBA-211ENST00000513021 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
LRBA-211ENST00000513021 AQRO60306 1485 aaKnown RBP eCLIP15.48■□□□□ 0.07
LRBA-211ENST00000513021 ABCA5Q8WWZ7 1642 aa15.48■□□□□ 0.07
LRBA-211ENST00000513021 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
LRBA-211ENST00000513021 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
LRBA-211ENST00000513021 CHIC1Q5VXU3 224 aa15.46■□□□□ 0.07
LRBA-211ENST00000513021 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
LRBA-211ENST00000513021 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
LRBA-211ENST00000513021 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
LRBA-211ENST00000513021 KIF27Q86VH2 1401 aa15.38■□□□□ 0.05
LRBA-211ENST00000513021 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
LRBA-211ENST00000513021 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
LRBA-211ENST00000513021 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.05
LRBA-211ENST00000513021 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.05
LRBA-211ENST00000513021 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
LRBA-211ENST00000513021 CHD1O14646 1710 aa15.3■□□□□ 0.04
LRBA-211ENST00000513021 SYNJ2O15056 1496 aa15.27■□□□□ 0.04
LRBA-211ENST00000513021 IGF1RP08069 1367 aa15.27■□□□□ 0.04
LRBA-211ENST00000513021 CUL7Q14999 1698 aa15.27■□□□□ 0.03
LRBA-211ENST00000513021 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
LRBA-211ENST00000513021 EEA1Q15075 1411 aa15.23■□□□□ 0.03
LRBA-211ENST00000513021 GRIN2AQ12879 1464 aa15.21■□□□□ 0.03
LRBA-211ENST00000513021 FBLN2P98095 1184 aa15.21■□□□□ 0.03
LRBA-211ENST00000513021 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
LRBA-211ENST00000513021 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
LRBA-211ENST00000513021 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
LRBA-211ENST00000513021 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
LRBA-211ENST00000513021 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
LRBA-211ENST00000513021 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
LRBA-211ENST00000513021 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
LRBA-211ENST00000513021 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
LRBA-211ENST00000513021 NUP160Q12769 1436 aa15.13■□□□□ 0.01
LRBA-211ENST00000513021 CLASP1Q7Z460 1538 aa15.12■□□□□ 0.01
LRBA-211ENST00000513021 KIF21BO75037 1637 aa15.1■□□□□ 0.01
LRBA-211ENST00000513021 CTTNBP2Q8WZ74 1663 aa15.04■□□□□ -0
LRBA-211ENST00000513021 KIAA0586Q9BVV6 1533 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms