RNA–Protein interactions for RNA: ENST00000510413.5

LRBA-209, Transcript of LPS responsive beige-like anchor protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRBA, Length 10,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-209ENST00000510413 NISCHQ9Y2I1 1504 aa13.14□□□□□ -0.31
LRBA-209ENST00000510413 DCAF8L2P0C7V8 631 aa12.39□□□□□ -0.43
LRBA-209ENST00000510413 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
LRBA-209ENST00000510413 CCDC180Q9P1Z9 1646 aa11.74□□□□□ -0.53
LRBA-209ENST00000510413 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
LRBA-209ENST00000510413 APLP2Q06481 763 aa11.48□□□□□ -0.57
LRBA-209ENST00000510413 SHROOM4Q9ULL8 1493 aa11.45□□□□□ -0.58
LRBA-209ENST00000510413 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
LRBA-209ENST00000510413 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
LRBA-209ENST00000510413 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
LRBA-209ENST00000510413 NACADO15069 1562 aa11.02□□□□□ -0.65
LRBA-209ENST00000510413 ABCC9O60706 1549 aa11.01□□□□□ -0.65
LRBA-209ENST00000510413 ZEB1P37275 1124 aaPredicted RBP11.01□□□□□ -0.65
LRBA-209ENST00000510413 ZCCHC6Q5VYS8 1495 aaKnown RBP10.9□□□□□ -0.67
LRBA-209ENST00000510413 UBTFP17480 764 aaKnown RBP10.89□□□□□ -0.67
LRBA-209ENST00000510413 SCRIBQ14160 1630 aa10.85□□□□□ -0.67
LRBA-209ENST00000510413 DCAF1Q9Y4B6 1507 aa10.8□□□□□ -0.68
LRBA-209ENST00000510413 ATP1B4Q9UN42 357 aaPredicted RBP10.73□□□□□ -0.69
LRBA-209ENST00000510413 CCER1Q8TC90 406 aaPredicted RBP10.72□□□□□ -0.69
LRBA-209ENST00000510413 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
LRBA-209ENST00000510413 MYO15BQ96JP2 1530 aa10.67□□□□□ -0.7
LRBA-209ENST00000510413 CENPBP07199 599 aaPredicted RBP10.65□□□□□ -0.71
LRBA-209ENST00000510413 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
LRBA-209ENST00000510413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
LRBA-209ENST00000510413 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
LRBA-209ENST00000510413 ACIN1Q9UKV3 1341 aaKnown RBP10.54□□□□□ -0.72
LRBA-209ENST00000510413 TRIM26Q12899 539 aaPredicted RBP10.53□□□□□ -0.72
LRBA-209ENST00000510413 RANGAP1P46060 587 aaPredicted RBP10.53□□□□□ -0.72
LRBA-209ENST00000510413 MYT1LQ9UL68 1186 aa10.52□□□□□ -0.72
LRBA-209ENST00000510413 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
LRBA-209ENST00000510413 SMARCA2P51531 1590 aa10.5□□□□□ -0.73
LRBA-209ENST00000510413 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
LRBA-209ENST00000510413 NEFLP07196 543 aa10.49□□□□□ -0.73
LRBA-209ENST00000510413 CDK11AQ9UQ88 783 aaPredicted RBP10.48□□□□□ -0.73
LRBA-209ENST00000510413 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
LRBA-209ENST00000510413 EEA1Q15075 1411 aa10.44□□□□□ -0.74
LRBA-209ENST00000510413 TTBK1Q5TCY1 1321 aaPredicted RBP10.37□□□□□ -0.75
LRBA-209ENST00000510413 MYT1Q01538 1121 aa10.37□□□□□ -0.75
LRBA-209ENST00000510413 CHIC1Q5VXU3 224 aa10.36□□□□□ -0.75
LRBA-209ENST00000510413 ERICH6Q7L0X2 663 aa10.3□□□□□ -0.76
LRBA-209ENST00000510413 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
LRBA-209ENST00000510413 ERCC6Q03468 1493 aa10.29□□□□□ -0.76
LRBA-209ENST00000510413 FBLN2P98095 1184 aa10.25□□□□□ -0.77
LRBA-209ENST00000510413 ESF1Q9H501 851 aaKnown RBP10.23□□□□□ -0.77
LRBA-209ENST00000510413 RSF1Q96T23 1441 aaPredicted RBP10.23□□□□□ -0.77
LRBA-209ENST00000510413 CSRNP3Q8WYN3 585 aa10.22□□□□□ -0.77
LRBA-209ENST00000510413 KIF27Q86VH2 1401 aa10.21□□□□□ -0.77
LRBA-209ENST00000510413 FAM50AQ14320 339 aaKnown RBP10.21□□□□□ -0.77
LRBA-209ENST00000510413 SMARCA4P51532 1647 aa10.21□□□□□ -0.77
LRBA-209ENST00000510413 ABCC8Q09428 1581 aa10.2□□□□□ -0.78
LRBA-209ENST00000510413 DAXXQ9UER7 740 aaPredicted RBP10.19□□□□□ -0.78
LRBA-209ENST00000510413 NEFMP07197 916 aa10.17□□□□□ -0.78
LRBA-209ENST00000510413 GOLGA3Q08378 1498 aa10.17□□□□□ -0.78
LRBA-209ENST00000510413 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
LRBA-209ENST00000510413 ITGAEP38570 1179 aa10.17□□□□□ -0.78
LRBA-209ENST00000510413 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
LRBA-209ENST00000510413 YTHDC1Q96MU7 727 aaKnown RBP10.17□□□□□ -0.78
LRBA-209ENST00000510413 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
LRBA-209ENST00000510413 CEP164Q9UPV0 1460 aa10.16□□□□□ -0.78
LRBA-209ENST00000510413 FHAD1B1AJZ9 1412 aa10.14□□□□□ -0.79
LRBA-209ENST00000510413 UNC13AQ9UPW8 1703 aa10.14□□□□□ -0.79
LRBA-209ENST00000510413 CHMP7Q8WUX9 453 aaPredicted RBP10.14□□□□□ -0.79
LRBA-209ENST00000510413 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
LRBA-209ENST00000510413 SLC4A1APQ9BWU0 796 aaKnown RBP10.08□□□□□ -0.8
LRBA-209ENST00000510413 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
LRBA-209ENST00000510413 MTUS2Q5JR59 1369 aa10.07□□□□□ -0.8
LRBA-209ENST00000510413 CLIP1P30622 1438 aa10.07□□□□□ -0.8
LRBA-209ENST00000510413 WIZO95785 1651 aa10.07□□□□□ -0.8
LRBA-209ENST00000510413 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
LRBA-209ENST00000510413 HRCP23327 699 aa10.06□□□□□ -0.8
LRBA-209ENST00000510413 CLSPNQ9HAW4 1339 aa10.06□□□□□ -0.8
LRBA-209ENST00000510413 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
LRBA-209ENST00000510413 TSPY4P0CV99 314 aa10.02□□□□□ -0.8
LRBA-209ENST00000510413 TSPY10P0CW01 314 aa10.02□□□□□ -0.8
LRBA-209ENST00000510413 POLR3GLQ9BT43 218 aa10.02□□□□□ -0.8
LRBA-209ENST00000510413 LOC105371045A0A1W2PR82 267 aa10.02□□□□□ -0.81
LRBA-209ENST00000510413 ANP32CO43423 234 aa10.01□□□□□ -0.81
LRBA-209ENST00000510413 CEP162Q5TB80 1403 aa10.01□□□□□ -0.81
LRBA-209ENST00000510413 CARMIL2Q6F5E8 1435 aa10□□□□□ -0.81
LRBA-209ENST00000510413 TONSLQ96HA7 1378 aa9.99□□□□□ -0.81
LRBA-209ENST00000510413 BCANQ96GW7 911 aa9.99□□□□□ -0.81
LRBA-209ENST00000510413 STAG3Q9UJ98 1225 aa9.99□□□□□ -0.81
LRBA-209ENST00000510413 PLEKHD1A6NEE1 506 aa9.95□□□□□ -0.82
LRBA-209ENST00000510413 FMN1Q68DA7 1419 aa9.94□□□□□ -0.82
LRBA-209ENST00000510413 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
LRBA-209ENST00000510413 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
LRBA-209ENST00000510413 CECR2Q9BXF3 1484 aa9.93□□□□□ -0.82
LRBA-209ENST00000510413 DIEXFQ68CQ4 756 aaKnown RBP9.92□□□□□ -0.82
LRBA-209ENST00000510413 ZNF777Q9ULD5 760 aaPredicted RBP9.92□□□□□ -0.82
LRBA-209ENST00000510413 MROH2BQ7Z745 1585 aa9.91□□□□□ -0.82
LRBA-209ENST00000510413 TNIKQ9UKE5 1360 aa9.91□□□□□ -0.82
LRBA-209ENST00000510413 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
LRBA-209ENST00000510413 CDCA8Q53HL2 280 aa9.9□□□□□ -0.82
LRBA-209ENST00000510413 KANK1Q14678 1352 aa9.9□□□□□ -0.83
LRBA-209ENST00000510413 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
LRBA-209ENST00000510413 CCDC88BA6NC98 1476 aa9.89□□□□□ -0.83
LRBA-209ENST00000510413 CUX2O14529 1486 aa9.88□□□□□ -0.83
LRBA-209ENST00000510413 KAT6BQ8WYB5 2073 aa9.88□□□□□ -0.83
LRBA-209ENST00000510413 HDGFP51858 240 aaKnown RBP9.87□□□□□ -0.83
LRBA-209ENST00000510413 NEUROD1Q13562 356 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms