RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-209ENST00000540162 NISCHQ9Y2I1 1504 aa29.22■■■□□ 2.27
MRPL48-209ENST00000540162 ABCC9O60706 1549 aa26.62■■□□□ 1.85
MRPL48-209ENST00000540162 CCDC180Q9P1Z9 1646 aa26.17■■□□□ 1.78
MRPL48-209ENST00000540162 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
MRPL48-209ENST00000540162 RB1CC1Q8TDY2 1594 aa25.13■■□□□ 1.61
MRPL48-209ENST00000540162 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
MRPL48-209ENST00000540162 NACADO15069 1562 aa24.89■■□□□ 1.58
MRPL48-209ENST00000540162 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
MRPL48-209ENST00000540162 MYO15BQ96JP2 1530 aa24.46■■□□□ 1.51
MRPL48-209ENST00000540162 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
MRPL48-209ENST00000540162 UNC13AQ9UPW8 1703 aa24.41■■□□□ 1.5
MRPL48-209ENST00000540162 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
MRPL48-209ENST00000540162 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
MRPL48-209ENST00000540162 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
MRPL48-209ENST00000540162 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
MRPL48-209ENST00000540162 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.42
MRPL48-209ENST00000540162 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
MRPL48-209ENST00000540162 EIF4G1Q04637 1599 aaKnown RBP23.84■■□□□ 1.41
MRPL48-209ENST00000540162 DNAJC5Q9H3Z4 198 aa23.37■■□□□ 1.33
MRPL48-209ENST00000540162 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
MRPL48-209ENST00000540162 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
MRPL48-209ENST00000540162 CUX2O14529 1486 aa22.97■■□□□ 1.27
MRPL48-209ENST00000540162 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
MRPL48-209ENST00000540162 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
MRPL48-209ENST00000540162 NESP48681 1621 aa22.79■■□□□ 1.24
MRPL48-209ENST00000540162 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
MRPL48-209ENST00000540162 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
MRPL48-209ENST00000540162 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
MRPL48-209ENST00000540162 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
MRPL48-209ENST00000540162 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
MRPL48-209ENST00000540162 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
MRPL48-209ENST00000540162 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
MRPL48-209ENST00000540162 THOC2Q8NI27 1593 aaKnown RBP22.48■■□□□ 1.19
MRPL48-209ENST00000540162 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
MRPL48-209ENST00000540162 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
MRPL48-209ENST00000540162 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
MRPL48-209ENST00000540162 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
MRPL48-209ENST00000540162 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
MRPL48-209ENST00000540162 WIZO95785 1651 aa22.19■■□□□ 1.14
MRPL48-209ENST00000540162 WDR62O43379 1518 aa22.16■■□□□ 1.14
MRPL48-209ENST00000540162 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
MRPL48-209ENST00000540162 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
MRPL48-209ENST00000540162 CFTRP13569 1480 aa22.03■■□□□ 1.12
MRPL48-209ENST00000540162 OSCARQ8IYS5 282 aa22.02■■□□□ 1.12
MRPL48-209ENST00000540162 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
MRPL48-209ENST00000540162 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
MRPL48-209ENST00000540162 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
MRPL48-209ENST00000540162 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
MRPL48-209ENST00000540162 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
MRPL48-209ENST00000540162 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
MRPL48-209ENST00000540162 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
MRPL48-209ENST00000540162 RIMBP3CA6NJZ7 1639 aa21.6■■□□□ 1.05
MRPL48-209ENST00000540162 RIMBP3BA6NNM3 1639 aa21.6■■□□□ 1.05
MRPL48-209ENST00000540162 RIMBP3Q9UFD9 1639 aa21.6■■□□□ 1.05
MRPL48-209ENST00000540162 CYB5RLQ6IPT4 315 aa21.55■■□□□ 1.04
MRPL48-209ENST00000540162 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
MRPL48-209ENST00000540162 ARHGEF11O15085 1522 aa21.55■■□□□ 1.04
MRPL48-209ENST00000540162 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
MRPL48-209ENST00000540162 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.04
MRPL48-209ENST00000540162 FBLN2P98095 1184 aa21.51■■□□□ 1.03
MRPL48-209ENST00000540162 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
MRPL48-209ENST00000540162 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
MRPL48-209ENST00000540162 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
MRPL48-209ENST00000540162 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
MRPL48-209ENST00000540162 TRHP20396 242 aaPredicted RBP21.39■■□□□ 1.01
MRPL48-209ENST00000540162 TDRD9Q8NDG6 1382 aaKnown RBP21.38■■□□□ 1.01
MRPL48-209ENST00000540162 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
MRPL48-209ENST00000540162 SOGA1O94964 1423 aa21.36■■□□□ 1.01
MRPL48-209ENST00000540162 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
MRPL48-209ENST00000540162 CHD1O14646 1710 aa21.3■■□□□ 1
MRPL48-209ENST00000540162 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
MRPL48-209ENST00000540162 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
MRPL48-209ENST00000540162 FGD5Q6ZNL6 1462 aa21.23■□□□□ 0.99
MRPL48-209ENST00000540162 CUX1P39880 1505 aa21.17■□□□□ 0.98
MRPL48-209ENST00000540162 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
MRPL48-209ENST00000540162 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.97
MRPL48-209ENST00000540162 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
MRPL48-209ENST00000540162 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
MRPL48-209ENST00000540162 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
MRPL48-209ENST00000540162 SYNJ2O15056 1496 aa21.09■□□□□ 0.97
MRPL48-209ENST00000540162 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
MRPL48-209ENST00000540162 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
MRPL48-209ENST00000540162 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
MRPL48-209ENST00000540162 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
MRPL48-209ENST00000540162 PBRM1Q86U86 1689 aa20.89■□□□□ 0.94
MRPL48-209ENST00000540162 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
MRPL48-209ENST00000540162 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
MRPL48-209ENST00000540162 GRIN2AQ12879 1464 aa20.86■□□□□ 0.93
MRPL48-209ENST00000540162 ERCC6L2Q5T890 1561 aa20.84■□□□□ 0.93
MRPL48-209ENST00000540162 NUP160Q12769 1436 aa20.81■□□□□ 0.92
MRPL48-209ENST00000540162 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
MRPL48-209ENST00000540162 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
MRPL48-209ENST00000540162 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
MRPL48-209ENST00000540162 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
MRPL48-209ENST00000540162 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
MRPL48-209ENST00000540162 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
MRPL48-209ENST00000540162 ERICH3Q5RHP9 1530 aa20.67■□□□□ 0.9
MRPL48-209ENST00000540162 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
MRPL48-209ENST00000540162 SHROOM2Q13796 1616 aa20.66■□□□□ 0.9
MRPL48-209ENST00000540162 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms