RNA–Protein interactions for RNA: ENST00000492706.5

TRO-224, Transcript of trophinin, humanhuman

TSL 2

Gene TRO, Length 3,677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-224ENST00000492706 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
TRO-224ENST00000492706 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
TRO-224ENST00000492706 ZCCHC6Q5VYS8 1495 aaKnown RBP21.99■■□□□ 1.11
TRO-224ENST00000492706 ABCC9O60706 1549 aa21.93■■□□□ 1.1
TRO-224ENST00000492706 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
TRO-224ENST00000492706 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
TRO-224ENST00000492706 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
TRO-224ENST00000492706 NACADO15069 1562 aa21.43■■□□□ 1.02
TRO-224ENST00000492706 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
TRO-224ENST00000492706 SHROOM4Q9ULL8 1493 aa21.22■□□□□ 0.99
TRO-224ENST00000492706 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
TRO-224ENST00000492706 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
TRO-224ENST00000492706 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
TRO-224ENST00000492706 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.894e-7■■□□□ 14.5
TRO-224ENST00000492706 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
TRO-224ENST00000492706 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
TRO-224ENST00000492706 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
TRO-224ENST00000492706 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
TRO-224ENST00000492706 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
TRO-224ENST00000492706 SMARCA4P51532 1647 aa20.21■□□□□ 0.83
TRO-224ENST00000492706 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
TRO-224ENST00000492706 WIZO95785 1651 aa20.1■□□□□ 0.81
TRO-224ENST00000492706 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.81
TRO-224ENST00000492706 PEG3Q9GZU2 1588 aa19.98■□□□□ 0.79
TRO-224ENST00000492706 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
TRO-224ENST00000492706 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
TRO-224ENST00000492706 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
TRO-224ENST00000492706 CC2D2AQ9P2K1 1620 aa19.85■□□□□ 0.77
TRO-224ENST00000492706 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
TRO-224ENST00000492706 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
TRO-224ENST00000492706 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
TRO-224ENST00000492706 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
TRO-224ENST00000492706 MYT1Q01538 1121 aa19.64■□□□□ 0.74
TRO-224ENST00000492706 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
TRO-224ENST00000492706 HRCP23327 699 aa19.52■□□□□ 0.71
TRO-224ENST00000492706 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
TRO-224ENST00000492706 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
TRO-224ENST00000492706 CFTRP13569 1480 aa19.29■□□□□ 0.68
TRO-224ENST00000492706 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
TRO-224ENST00000492706 NESP48681 1621 aa19.2■□□□□ 0.66
TRO-224ENST00000492706 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
TRO-224ENST00000492706 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
TRO-224ENST00000492706 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
TRO-224ENST00000492706 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
TRO-224ENST00000492706 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
TRO-224ENST00000492706 WRNQ14191 1432 aaPredicted RBP eCLIP19.05■□□□□ 0.64
TRO-224ENST00000492706 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
TRO-224ENST00000492706 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
TRO-224ENST00000492706 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.63
TRO-224ENST00000492706 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
TRO-224ENST00000492706 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
TRO-224ENST00000492706 CUX1P39880 1505 aa18.97■□□□□ 0.63
TRO-224ENST00000492706 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
TRO-224ENST00000492706 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
TRO-224ENST00000492706 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
TRO-224ENST00000492706 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
TRO-224ENST00000492706 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
TRO-224ENST00000492706 TOPBP1Q92547 1522 aa18.83■□□□□ 0.61
TRO-224ENST00000492706 ERCC6Q03468 1493 aa18.78■□□□□ 0.6
TRO-224ENST00000492706 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
TRO-224ENST00000492706 MRC2Q9UBG0 1479 aa18.78■□□□□ 0.6
TRO-224ENST00000492706 SOGA1O94964 1423 aa18.77■□□□□ 0.6
TRO-224ENST00000492706 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
TRO-224ENST00000492706 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
TRO-224ENST00000492706 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
TRO-224ENST00000492706 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
TRO-224ENST00000492706 WDR62O43379 1518 aa18.71■□□□□ 0.59
TRO-224ENST00000492706 PRKCSHP14314 528 aaPredicted RBP18.7■□□□□ 0.58
TRO-224ENST00000492706 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
TRO-224ENST00000492706 BCL11AQ9H165 835 aa18.65■□□□□ 0.58
TRO-224ENST00000492706 EEA1Q15075 1411 aa18.62■□□□□ 0.57
TRO-224ENST00000492706 CUX2O14529 1486 aa18.61■□□□□ 0.57
TRO-224ENST00000492706 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
TRO-224ENST00000492706 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
TRO-224ENST00000492706 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
TRO-224ENST00000492706 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.56
TRO-224ENST00000492706 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.56
TRO-224ENST00000492706 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
TRO-224ENST00000492706 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
TRO-224ENST00000492706 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
TRO-224ENST00000492706 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
TRO-224ENST00000492706 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
TRO-224ENST00000492706 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
TRO-224ENST00000492706 IGF1RP08069 1367 aa18.46■□□□□ 0.55
TRO-224ENST00000492706 ZNF608Q9ULD9 1512 aaPredicted RBP18.45■□□□□ 0.54
TRO-224ENST00000492706 GTF3C3Q9Y5Q9 886 aa18.44■□□□□ 0.54
TRO-224ENST00000492706 KIF21BO75037 1637 aa18.44■□□□□ 0.54
TRO-224ENST00000492706 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
TRO-224ENST00000492706 PRXQ9BXM0 1461 aa18.43■□□□□ 0.54
TRO-224ENST00000492706 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRO-224ENST00000492706 RAPGEF2Q9Y4G8 1499 aa18.4■□□□□ 0.54
TRO-224ENST00000492706 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
TRO-224ENST00000492706 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
TRO-224ENST00000492706 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
TRO-224ENST00000492706 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
TRO-224ENST00000492706 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
TRO-224ENST00000492706 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
TRO-224ENST00000492706 CUL7Q14999 1698 aa18.33■□□□□ 0.52
TRO-224ENST00000492706 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
TRO-224ENST00000492706 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms