RNA–Protein interactions for RNA: ENST00000438705.3

SNHG15-201, Transcript of small nucleolar RNA host gene 15, humanhuman

TSL 3 BASIC

Gene SNHG15, Length 509 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG15-201ENST00000438705 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
SNHG15-201ENST00000438705 ABCC9O60706 1549 aa25.38■■□□□ 1.65
SNHG15-201ENST00000438705 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
SNHG15-201ENST00000438705 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
SNHG15-201ENST00000438705 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
SNHG15-201ENST00000438705 NACADO15069 1562 aa23.69■■□□□ 1.38
SNHG15-201ENST00000438705 DCAF8L2P0C7V8 631 aa23.65■■□□□ 1.38
SNHG15-201ENST00000438705 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
SNHG15-201ENST00000438705 UNC13AQ9UPW8 1703 aa23.58■■□□□ 1.37
SNHG15-201ENST00000438705 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
SNHG15-201ENST00000438705 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
SNHG15-201ENST00000438705 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
SNHG15-201ENST00000438705 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
SNHG15-201ENST00000438705 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
SNHG15-201ENST00000438705 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
SNHG15-201ENST00000438705 SHROOM4Q9ULL8 1493 aa22.81■■□□□ 1.24
SNHG15-201ENST00000438705 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
SNHG15-201ENST00000438705 EIF4G1Q04637 1599 aaKnown RBP22.75■■□□□ 1.23
SNHG15-201ENST00000438705 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
SNHG15-201ENST00000438705 ERCC6Q03468 1493 aa21.92■■□□□ 1.1
SNHG15-201ENST00000438705 CUX2O14529 1486 aa21.9■■□□□ 1.1
SNHG15-201ENST00000438705 NCAPD3P42695 1498 aa21.84■■□□□ 1.09
SNHG15-201ENST00000438705 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
SNHG15-201ENST00000438705 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
SNHG15-201ENST00000438705 NESP48681 1621 aa21.73■■□□□ 1.07
SNHG15-201ENST00000438705 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
SNHG15-201ENST00000438705 HMGXB3Q12766 1538 aa21.69■■□□□ 1.06
SNHG15-201ENST00000438705 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
SNHG15-201ENST00000438705 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
SNHG15-201ENST00000438705 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
SNHG15-201ENST00000438705 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
SNHG15-201ENST00000438705 LAMC3Q9Y6N6 1575 aa21.46■■□□□ 1.03
SNHG15-201ENST00000438705 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
SNHG15-201ENST00000438705 MROH2BQ7Z745 1585 aa21.41■■□□□ 1.02
SNHG15-201ENST00000438705 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
SNHG15-201ENST00000438705 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
SNHG15-201ENST00000438705 WIZO95785 1651 aa21.21■□□□□ 0.99
SNHG15-201ENST00000438705 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
SNHG15-201ENST00000438705 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
SNHG15-201ENST00000438705 WDR62O43379 1518 aa21.14■□□□□ 0.97
SNHG15-201ENST00000438705 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
SNHG15-201ENST00000438705 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
SNHG15-201ENST00000438705 CFTRP13569 1480 aa20.88■□□□□ 0.93
SNHG15-201ENST00000438705 OSCARQ8IYS5 282 aa20.87■□□□□ 0.93
SNHG15-201ENST00000438705 URB2Q14146 1524 aaKnown RBP20.86■□□□□ 0.93
SNHG15-201ENST00000438705 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
SNHG15-201ENST00000438705 RSF1Q96T23 1441 aaPredicted RBP20.81■□□□□ 0.92
SNHG15-201ENST00000438705 PRDM2Q13029 1718 aa20.8■□□□□ 0.92
SNHG15-201ENST00000438705 RIMBP3CA6NJZ7 1639 aa20.73■□□□□ 0.91
SNHG15-201ENST00000438705 RIMBP3BA6NNM3 1639 aa20.73■□□□□ 0.91
SNHG15-201ENST00000438705 RIMBP3Q9UFD9 1639 aa20.73■□□□□ 0.91
SNHG15-201ENST00000438705 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
SNHG15-201ENST00000438705 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
SNHG15-201ENST00000438705 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
SNHG15-201ENST00000438705 ARHGEF11O15085 1522 aa20.58■□□□□ 0.88
SNHG15-201ENST00000438705 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
SNHG15-201ENST00000438705 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
SNHG15-201ENST00000438705 CHD1O14646 1710 aa20.53■□□□□ 0.88
SNHG15-201ENST00000438705 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
SNHG15-201ENST00000438705 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
SNHG15-201ENST00000438705 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.863e-7■■■■□ 24.5
SNHG15-201ENST00000438705 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
SNHG15-201ENST00000438705 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
SNHG15-201ENST00000438705 FBLN2P98095 1184 aa20.41■□□□□ 0.86
SNHG15-201ENST00000438705 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
SNHG15-201ENST00000438705 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
SNHG15-201ENST00000438705 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
SNHG15-201ENST00000438705 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
SNHG15-201ENST00000438705 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
SNHG15-201ENST00000438705 SOGA1O94964 1423 aa20.23■□□□□ 0.83
SNHG15-201ENST00000438705 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
SNHG15-201ENST00000438705 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
SNHG15-201ENST00000438705 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
SNHG15-201ENST00000438705 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
SNHG15-201ENST00000438705 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
SNHG15-201ENST00000438705 CUX1P39880 1505 aa20.13■□□□□ 0.81
SNHG15-201ENST00000438705 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
SNHG15-201ENST00000438705 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
SNHG15-201ENST00000438705 MAGI1Q96QZ7 1491 aaPredicted RBP20.1■□□□□ 0.81
SNHG15-201ENST00000438705 GRIN2BQ13224 1484 aa20.08■□□□□ 0.81
SNHG15-201ENST00000438705 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
SNHG15-201ENST00000438705 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
SNHG15-201ENST00000438705 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
SNHG15-201ENST00000438705 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
SNHG15-201ENST00000438705 ERCC6L2Q5T890 1561 aa19.91■□□□□ 0.78
SNHG15-201ENST00000438705 ABCA10Q8WWZ4 1543 aa19.9■□□□□ 0.78
SNHG15-201ENST00000438705 GRIN2AQ12879 1464 aa19.84■□□□□ 0.77
SNHG15-201ENST00000438705 ADAMTS12P58397 1594 aa19.83■□□□□ 0.76
SNHG15-201ENST00000438705 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
SNHG15-201ENST00000438705 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
SNHG15-201ENST00000438705 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
SNHG15-201ENST00000438705 NUP160Q12769 1436 aa19.75■□□□□ 0.75
SNHG15-201ENST00000438705 SHROOM2Q13796 1616 aa19.74■□□□□ 0.75
SNHG15-201ENST00000438705 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
SNHG15-201ENST00000438705 KIF13AQ9H1H9 1805 aa19.74■□□□□ 0.75
SNHG15-201ENST00000438705 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
SNHG15-201ENST00000438705 FHAD1B1AJZ9 1412 aa19.69■□□□□ 0.74
SNHG15-201ENST00000438705 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
SNHG15-201ENST00000438705 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
SNHG15-201ENST00000438705 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms