RNA–Protein interactions for RNA: ENST00000444946.6

SOD2-205, Transcript of superoxide dismutase 2, humanhuman

TSL 2 BASIC

Gene SOD2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-205ENST00000444946 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
SOD2-205ENST00000444946 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
SOD2-205ENST00000444946 ABCC9O60706 1549 aa29.35■■■□□ 2.29
SOD2-205ENST00000444946 RB1CC1Q8TDY2 1594 aa27.96■■■□□ 2.07
SOD2-205ENST00000444946 NACADO15069 1562 aa27.73■■■□□ 2.03
SOD2-205ENST00000444946 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
SOD2-205ENST00000444946 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
SOD2-205ENST00000444946 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
SOD2-205ENST00000444946 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
SOD2-205ENST00000444946 PABPN1Q86U42 306 aaKnown RBP eCLIP27.26■■□□□ 1.95
SOD2-205ENST00000444946 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
SOD2-205ENST00000444946 ZCCHC6Q5VYS8 1495 aaKnown RBP27.05■■□□□ 1.92
SOD2-205ENST00000444946 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.91
SOD2-205ENST00000444946 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
SOD2-205ENST00000444946 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
SOD2-205ENST00000444946 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
SOD2-205ENST00000444946 EIF4G1Q04637 1599 aaKnown RBP26.49■■□□□ 1.83
SOD2-205ENST00000444946 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
SOD2-205ENST00000444946 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
SOD2-205ENST00000444946 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
SOD2-205ENST00000444946 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
SOD2-205ENST00000444946 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
SOD2-205ENST00000444946 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
SOD2-205ENST00000444946 BAZ1AQ9NRL2 1556 aaPredicted RBP25.36■■□□□ 1.65
SOD2-205ENST00000444946 ERCC6Q03468 1493 aa25.34■■□□□ 1.65
SOD2-205ENST00000444946 CUX2O14529 1486 aa25.31■■□□□ 1.64
SOD2-205ENST00000444946 DNAJC5Q9H3Z4 198 aa25.28■■□□□ 1.64
SOD2-205ENST00000444946 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
SOD2-205ENST00000444946 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
SOD2-205ENST00000444946 NESP48681 1621 aa25.22■■□□□ 1.63
SOD2-205ENST00000444946 MROH2BQ7Z745 1585 aa25.15■■□□□ 1.62
SOD2-205ENST00000444946 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
SOD2-205ENST00000444946 THOC2Q8NI27 1593 aaKnown RBP25.03■■□□□ 1.6
SOD2-205ENST00000444946 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
SOD2-205ENST00000444946 WIZO95785 1651 aa24.92■■□□□ 1.58
SOD2-205ENST00000444946 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
SOD2-205ENST00000444946 CADPSQ9ULU8 1353 aa24.76■■□□□ 1.55
SOD2-205ENST00000444946 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
SOD2-205ENST00000444946 WDR62O43379 1518 aa24.64■■□□□ 1.53
SOD2-205ENST00000444946 RSF1Q96T23 1441 aaPredicted RBP24.57■■□□□ 1.52
SOD2-205ENST00000444946 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
SOD2-205ENST00000444946 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
SOD2-205ENST00000444946 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
SOD2-205ENST00000444946 CFTRP13569 1480 aa24.5■■□□□ 1.51
SOD2-205ENST00000444946 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
SOD2-205ENST00000444946 URB2Q14146 1524 aaKnown RBP24.34■■□□□ 1.49
SOD2-205ENST00000444946 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
SOD2-205ENST00000444946 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
SOD2-205ENST00000444946 OSCARQ8IYS5 282 aa24.08■■□□□ 1.45
SOD2-205ENST00000444946 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
SOD2-205ENST00000444946 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
SOD2-205ENST00000444946 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
SOD2-205ENST00000444946 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
SOD2-205ENST00000444946 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
SOD2-205ENST00000444946 EIF4G3O43432 1585 aaKnown RBP23.98■■□□□ 1.43
SOD2-205ENST00000444946 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
SOD2-205ENST00000444946 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
SOD2-205ENST00000444946 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
SOD2-205ENST00000444946 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
SOD2-205ENST00000444946 CHD1O14646 1710 aa23.87■■□□□ 1.41
SOD2-205ENST00000444946 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
SOD2-205ENST00000444946 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.41e-6■■■■■ 33.2
SOD2-205ENST00000444946 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
SOD2-205ENST00000444946 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
SOD2-205ENST00000444946 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
SOD2-205ENST00000444946 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
SOD2-205ENST00000444946 SOGA1O94964 1423 aa23.67■■□□□ 1.38
SOD2-205ENST00000444946 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
SOD2-205ENST00000444946 CUX1P39880 1505 aa23.64■■□□□ 1.38
SOD2-205ENST00000444946 FBLN2P98095 1184 aa23.62■■□□□ 1.37
SOD2-205ENST00000444946 TDRD9Q8NDG6 1382 aaKnown RBP23.62■■□□□ 1.37
SOD2-205ENST00000444946 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
SOD2-205ENST00000444946 PBRM1Q86U86 1689 aa23.55■■□□□ 1.36
SOD2-205ENST00000444946 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
SOD2-205ENST00000444946 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
SOD2-205ENST00000444946 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
SOD2-205ENST00000444946 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
SOD2-205ENST00000444946 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
SOD2-205ENST00000444946 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
SOD2-205ENST00000444946 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
SOD2-205ENST00000444946 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
SOD2-205ENST00000444946 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
SOD2-205ENST00000444946 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
SOD2-205ENST00000444946 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
SOD2-205ENST00000444946 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
SOD2-205ENST00000444946 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.32
SOD2-205ENST00000444946 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
SOD2-205ENST00000444946 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
SOD2-205ENST00000444946 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
SOD2-205ENST00000444946 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
SOD2-205ENST00000444946 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
SOD2-205ENST00000444946 CEP170Q5SW79 1584 aa23.16■■□□□ 1.3
SOD2-205ENST00000444946 ERCC6L2Q5T890 1561 aa23.13■■□□□ 1.29
SOD2-205ENST00000444946 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
SOD2-205ENST00000444946 NUP160Q12769 1436 aa23.1■■□□□ 1.29
SOD2-205ENST00000444946 SHROOM2Q13796 1616 aa23.09■■□□□ 1.29
SOD2-205ENST00000444946 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.29
SOD2-205ENST00000444946 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
SOD2-205ENST00000444946 KIF13AQ9H1H9 1805 aa22.88■■□□□ 1.25
SOD2-205ENST00000444946 PRG4Q92954 1404 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms