RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 NISCHQ9Y2I1 1504 aa37.85■■■■□ 3.65
AFF1-205ENST00000504956 CCDC180Q9P1Z9 1646 aa33.54■■■□□ 2.96
AFF1-205ENST00000504956 ABCC9O60706 1549 aa32.41■■■□□ 2.78
AFF1-205ENST00000504956 ZCCHC6Q5VYS8 1495 aaKnown RBP31.63■■■□□ 2.65
AFF1-205ENST00000504956 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
AFF1-205ENST00000504956 NACADO15069 1562 aa31.36■■■□□ 2.61
AFF1-205ENST00000504956 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
AFF1-205ENST00000504956 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
AFF1-205ENST00000504956 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
AFF1-205ENST00000504956 UNC13AQ9UPW8 1703 aa30.8■■■□□ 2.52
AFF1-205ENST00000504956 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
AFF1-205ENST00000504956 BICRAQ9NZM4 1560 aa30.4■■■□□ 2.46
AFF1-205ENST00000504956 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
AFF1-205ENST00000504956 SHROOM4Q9ULL8 1493 aa30.21■■■□□ 2.43
AFF1-205ENST00000504956 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
AFF1-205ENST00000504956 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
AFF1-205ENST00000504956 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
AFF1-205ENST00000504956 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
AFF1-205ENST00000504956 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
AFF1-205ENST00000504956 BAZ1AQ9NRL2 1556 aaPredicted RBP29.31■■■□□ 2.28
AFF1-205ENST00000504956 MROH2BQ7Z745 1585 aa29.21■■■□□ 2.27
AFF1-205ENST00000504956 SMARCA2P51531 1590 aa29.01■■■□□ 2.23
AFF1-205ENST00000504956 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
AFF1-205ENST00000504956 PEG3Q9GZU2 1588 aa28.99■■■□□ 2.23
AFF1-205ENST00000504956 WIZO95785 1651 aa28.98■■■□□ 2.23
AFF1-205ENST00000504956 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
AFF1-205ENST00000504956 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
AFF1-205ENST00000504956 HMGXB3Q12766 1538 aa28.85■■■□□ 2.21
AFF1-205ENST00000504956 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
AFF1-205ENST00000504956 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
AFF1-205ENST00000504956 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
AFF1-205ENST00000504956 CCDC88BA6NC98 1476 aa28.27■■■□□ 2.12
AFF1-205ENST00000504956 NESP48681 1621 aa28.18■■■□□ 2.1
AFF1-205ENST00000504956 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.09
AFF1-205ENST00000504956 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
AFF1-205ENST00000504956 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
AFF1-205ENST00000504956 CFTRP13569 1480 aa28.02■■■□□ 2.08
AFF1-205ENST00000504956 KIF21AQ7Z4S6 1674 aa27.95■■■□□ 2.07
AFF1-205ENST00000504956 ERCC6Q03468 1493 aa27.89■■■□□ 2.06
AFF1-205ENST00000504956 PDS5BQ9NTI5 1447 aa27.88■■■□□ 2.05
AFF1-205ENST00000504956 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
AFF1-205ENST00000504956 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
AFF1-205ENST00000504956 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
AFF1-205ENST00000504956 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
AFF1-205ENST00000504956 WDR62O43379 1518 aa27.52■■■□□ 2
AFF1-205ENST00000504956 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
AFF1-205ENST00000504956 ABCC8Q09428 1581 aa27.45■■□□□ 1.98
AFF1-205ENST00000504956 DNMBPQ6XZF7 1577 aa27.44■■□□□ 1.98
AFF1-205ENST00000504956 TOPBP1Q92547 1522 aa27.42■■□□□ 1.98
AFF1-205ENST00000504956 CUX2O14529 1486 aa27.4■■□□□ 1.98
AFF1-205ENST00000504956 CUX1P39880 1505 aa27.38■■□□□ 1.97
AFF1-205ENST00000504956 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
AFF1-205ENST00000504956 SYNJ1O43426 1573 aa27.3■■□□□ 1.96
AFF1-205ENST00000504956 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
AFF1-205ENST00000504956 TOP2BQ02880 1626 aa27.26■■□□□ 1.95
AFF1-205ENST00000504956 FGD5Q6ZNL6 1462 aa27.22■■□□□ 1.95
AFF1-205ENST00000504956 POLA1P09884 1462 aaPredicted RBP27.21■■□□□ 1.95
AFF1-205ENST00000504956 TARBP1Q13395 1621 aaKnown RBP27.13■■□□□ 1.93
AFF1-205ENST00000504956 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
AFF1-205ENST00000504956 RAD54L2Q9Y4B4 1467 aa27.11■■□□□ 1.93
AFF1-205ENST00000504956 SOGA1O94964 1423 aa27.07■■□□□ 1.92
AFF1-205ENST00000504956 WDR97A6NE52 1622 aa27.06■■□□□ 1.92
AFF1-205ENST00000504956 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
AFF1-205ENST00000504956 EIF4G3O43432 1585 aaKnown RBP26.97■■□□□ 1.91
AFF1-205ENST00000504956 ABCA10Q8WWZ4 1543 aa26.94■■□□□ 1.9
AFF1-205ENST00000504956 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
AFF1-205ENST00000504956 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.89
AFF1-205ENST00000504956 AQRO60306 1485 aaKnown RBP eCLIP26.89■■□□□ 1.89
AFF1-205ENST00000504956 ABCA5Q8WWZ7 1642 aa26.86■■□□□ 1.89
AFF1-205ENST00000504956 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
AFF1-205ENST00000504956 PBRM1Q86U86 1689 aa26.84■■□□□ 1.89
AFF1-205ENST00000504956 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
AFF1-205ENST00000504956 GRIN2BQ13224 1484 aa26.71■■□□□ 1.87
AFF1-205ENST00000504956 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
AFF1-205ENST00000504956 SNAPC4Q5SXM2 1469 aa26.67■■□□□ 1.86
AFF1-205ENST00000504956 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
AFF1-205ENST00000504956 ERICH3Q5RHP9 1530 aa26.63■■□□□ 1.85
AFF1-205ENST00000504956 CHD1O14646 1710 aa26.61■■□□□ 1.85
AFF1-205ENST00000504956 MAGI1Q96QZ7 1491 aaPredicted RBP26.6■■□□□ 1.85
AFF1-205ENST00000504956 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
AFF1-205ENST00000504956 CUL7Q14999 1698 aa26.53■■□□□ 1.84
AFF1-205ENST00000504956 IGF1RP08069 1367 aa26.51■■□□□ 1.83
AFF1-205ENST00000504956 SYNJ2O15056 1496 aa26.5■■□□□ 1.83
AFF1-205ENST00000504956 FBLN2P98095 1184 aa26.47■■□□□ 1.83
AFF1-205ENST00000504956 FHAD1B1AJZ9 1412 aa26.47■■□□□ 1.83
AFF1-205ENST00000504956 CHMP7Q8WUX9 453 aaPredicted RBP26.43■■□□□ 1.82
AFF1-205ENST00000504956 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
AFF1-205ENST00000504956 EEA1Q15075 1411 aa26.42■■□□□ 1.82
AFF1-205ENST00000504956 GRIN2AQ12879 1464 aa26.4■■□□□ 1.82
AFF1-205ENST00000504956 CARMIL1Q5VZK9 1371 aa26.38■■□□□ 1.81
AFF1-205ENST00000504956 CSRNP3Q8WYN3 585 aa26.32■■□□□ 1.8
AFF1-205ENST00000504956 CEP170Q5SW79 1584 aa26.31■■□□□ 1.8
AFF1-205ENST00000504956 OSCARQ8IYS5 282 aa26.3■■□□□ 1.8
AFF1-205ENST00000504956 PRXQ9BXM0 1461 aa26.29■■□□□ 1.8
AFF1-205ENST00000504956 RAPGEF2Q9Y4G8 1499 aa26.29■■□□□ 1.8
AFF1-205ENST00000504956 NUP160Q12769 1436 aa26.23■■□□□ 1.79
AFF1-205ENST00000504956 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
AFF1-205ENST00000504956 KIF21BO75037 1637 aa26.21■■□□□ 1.79
AFF1-205ENST00000504956 CTTNBP2Q8WZ74 1663 aa26.17■■□□□ 1.78
AFF1-205ENST00000504956 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms