RNA–Protein interactions for RNA: ENST00000443006.5

MDH2-204, Transcript of malate dehydrogenase 2, humanhuman

TSL 2 BASIC

Gene MDH2, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH2-204ENST00000443006 NISCHQ9Y2I1 1504 aa28.29■■■□□ 2.12
MDH2-204ENST00000443006 CCDC180Q9P1Z9 1646 aa24.77■■□□□ 1.56
MDH2-204ENST00000443006 ABCC9O60706 1549 aa24.08■■□□□ 1.45
MDH2-204ENST00000443006 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
MDH2-204ENST00000443006 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
MDH2-204ENST00000443006 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
MDH2-204ENST00000443006 NACADO15069 1562 aa23.27■■□□□ 1.32
MDH2-204ENST00000443006 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
MDH2-204ENST00000443006 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.3
MDH2-204ENST00000443006 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
MDH2-204ENST00000443006 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
MDH2-204ENST00000443006 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.23
MDH2-204ENST00000443006 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
MDH2-204ENST00000443006 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
MDH2-204ENST00000443006 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
MDH2-204ENST00000443006 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
MDH2-204ENST00000443006 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.1
MDH2-204ENST00000443006 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
MDH2-204ENST00000443006 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
MDH2-204ENST00000443006 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
MDH2-204ENST00000443006 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
MDH2-204ENST00000443006 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
MDH2-204ENST00000443006 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
MDH2-204ENST00000443006 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
MDH2-204ENST00000443006 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
MDH2-204ENST00000443006 WIZO95785 1651 aa21.62■■□□□ 1.05
MDH2-204ENST00000443006 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
MDH2-204ENST00000443006 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
MDH2-204ENST00000443006 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
MDH2-204ENST00000443006 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
MDH2-204ENST00000443006 HMGXB3Q12766 1538 aa21.4■■□□□ 1.02
MDH2-204ENST00000443006 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
MDH2-204ENST00000443006 HRCP23327 699 aa21.36■■□□□ 1.01
MDH2-204ENST00000443006 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
MDH2-204ENST00000443006 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
MDH2-204ENST00000443006 NESP48681 1621 aa20.98■□□□□ 0.95
MDH2-204ENST00000443006 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
MDH2-204ENST00000443006 CFTRP13569 1480 aa20.92■□□□□ 0.94
MDH2-204ENST00000443006 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
MDH2-204ENST00000443006 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.93
MDH2-204ENST00000443006 LAMC3Q9Y6N6 1575 aa20.83■□□□□ 0.92
MDH2-204ENST00000443006 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
MDH2-204ENST00000443006 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
MDH2-204ENST00000443006 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
MDH2-204ENST00000443006 PPARGC1BQ86YN6 1023 aaKnown RBP20.65■□□□□ 0.9
MDH2-204ENST00000443006 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
MDH2-204ENST00000443006 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
MDH2-204ENST00000443006 KIF21AQ7Z4S6 1674 aa20.59■□□□□ 0.89
MDH2-204ENST00000443006 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
MDH2-204ENST00000443006 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
MDH2-204ENST00000443006 TRIM26Q12899 539 aaPredicted RBP20.55■□□□□ 0.88
MDH2-204ENST00000443006 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
MDH2-204ENST00000443006 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
MDH2-204ENST00000443006 URB2Q14146 1524 aaKnown RBP20.5■□□□□ 0.87
MDH2-204ENST00000443006 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
MDH2-204ENST00000443006 CUX1P39880 1505 aa20.47■□□□□ 0.87
MDH2-204ENST00000443006 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
MDH2-204ENST00000443006 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
MDH2-204ENST00000443006 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
MDH2-204ENST00000443006 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.86
MDH2-204ENST00000443006 WDR62O43379 1518 aa20.37■□□□□ 0.85
MDH2-204ENST00000443006 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
MDH2-204ENST00000443006 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
MDH2-204ENST00000443006 ZEB1P37275 1124 aaPredicted RBP20.33■□□□□ 0.85
MDH2-204ENST00000443006 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
MDH2-204ENST00000443006 BIVM-ERCC5R4GMW8 1640 aa20.29■□□□□ 0.84
MDH2-204ENST00000443006 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
MDH2-204ENST00000443006 SOGA1O94964 1423 aa20.28■□□□□ 0.84
MDH2-204ENST00000443006 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
MDH2-204ENST00000443006 CUX2O14529 1486 aa20.26■□□□□ 0.83
MDH2-204ENST00000443006 TDRD9Q8NDG6 1382 aaKnown RBP20.18■□□□□ 0.82
MDH2-204ENST00000443006 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
MDH2-204ENST00000443006 EEA1Q15075 1411 aa20.15■□□□□ 0.82
MDH2-204ENST00000443006 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
MDH2-204ENST00000443006 TARBP1Q13395 1621 aaKnown RBP20.12■□□□□ 0.81
MDH2-204ENST00000443006 RUSC2Q8N2Y8 1516 aa20.11■□□□□ 0.81
MDH2-204ENST00000443006 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
MDH2-204ENST00000443006 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.812e-8■■■■□ 25.6
MDH2-204ENST00000443006 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
MDH2-204ENST00000443006 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
MDH2-204ENST00000443006 CSRNP3Q8WYN3 585 aa20.02■□□□□ 0.8
MDH2-204ENST00000443006 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
MDH2-204ENST00000443006 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
MDH2-204ENST00000443006 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
MDH2-204ENST00000443006 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
MDH2-204ENST00000443006 IGF1RP08069 1367 aa19.97■□□□□ 0.79
MDH2-204ENST00000443006 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
MDH2-204ENST00000443006 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
MDH2-204ENST00000443006 GOLGA3Q08378 1498 aa19.93■□□□□ 0.78
MDH2-204ENST00000443006 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
MDH2-204ENST00000443006 FBLN2P98095 1184 aa19.88■□□□□ 0.77
MDH2-204ENST00000443006 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
MDH2-204ENST00000443006 SNAPC4Q5SXM2 1469 aa19.87■□□□□ 0.77
MDH2-204ENST00000443006 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
MDH2-204ENST00000443006 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
MDH2-204ENST00000443006 KIF21BO75037 1637 aa19.83■□□□□ 0.76
MDH2-204ENST00000443006 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.76
MDH2-204ENST00000443006 MYT1Q01538 1121 aa19.82■□□□□ 0.76
MDH2-204ENST00000443006 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
MDH2-204ENST00000443006 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms