RNA–Protein interactions for RNA: ENST00000398483.7

MRPL48-203, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3 BASIC

Gene MRPL48, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-203ENST00000398483 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
MRPL48-203ENST00000398483 ABCC9O60706 1549 aa28.41■■■□□ 2.14
MRPL48-203ENST00000398483 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
MRPL48-203ENST00000398483 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
MRPL48-203ENST00000398483 RB1CC1Q8TDY2 1594 aa26.76■■□□□ 1.87
MRPL48-203ENST00000398483 DCAF8L2P0C7V8 631 aa26.69■■□□□ 1.86
MRPL48-203ENST00000398483 NACADO15069 1562 aa26.52■■□□□ 1.84
MRPL48-203ENST00000398483 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.84
MRPL48-203ENST00000398483 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
MRPL48-203ENST00000398483 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
MRPL48-203ENST00000398483 MYO15BQ96JP2 1530 aa26■■□□□ 1.75
MRPL48-203ENST00000398483 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
MRPL48-203ENST00000398483 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
MRPL48-203ENST00000398483 DCAF1Q9Y4B6 1507 aa25.67■■□□□ 1.7
MRPL48-203ENST00000398483 CC2D2AQ9P2K1 1620 aa25.57■■□□□ 1.68
MRPL48-203ENST00000398483 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
MRPL48-203ENST00000398483 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.66
MRPL48-203ENST00000398483 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
MRPL48-203ENST00000398483 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
MRPL48-203ENST00000398483 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
MRPL48-203ENST00000398483 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
MRPL48-203ENST00000398483 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
MRPL48-203ENST00000398483 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
MRPL48-203ENST00000398483 NESP48681 1621 aa24.4■■□□□ 1.5
MRPL48-203ENST00000398483 CUX2O14529 1486 aa24.33■■□□□ 1.49
MRPL48-203ENST00000398483 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
MRPL48-203ENST00000398483 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
MRPL48-203ENST00000398483 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
MRPL48-203ENST00000398483 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
MRPL48-203ENST00000398483 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.46
MRPL48-203ENST00000398483 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
MRPL48-203ENST00000398483 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
MRPL48-203ENST00000398483 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
MRPL48-203ENST00000398483 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
MRPL48-203ENST00000398483 WIZO95785 1651 aa23.91■■□□□ 1.42
MRPL48-203ENST00000398483 PDS5BQ9NTI5 1447 aa23.85■■□□□ 1.41
MRPL48-203ENST00000398483 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
MRPL48-203ENST00000398483 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
MRPL48-203ENST00000398483 WDR62O43379 1518 aa23.64■■□□□ 1.37
MRPL48-203ENST00000398483 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
MRPL48-203ENST00000398483 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
MRPL48-203ENST00000398483 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
MRPL48-203ENST00000398483 CEP164Q9UPV0 1460 aa23.59■■□□□ 1.37
MRPL48-203ENST00000398483 CFTRP13569 1480 aa23.5■■□□□ 1.35
MRPL48-203ENST00000398483 TOP2AP11388 1531 aaKnown RBP23.48■■□□□ 1.35
MRPL48-203ENST00000398483 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
MRPL48-203ENST00000398483 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
MRPL48-203ENST00000398483 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
MRPL48-203ENST00000398483 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
MRPL48-203ENST00000398483 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
MRPL48-203ENST00000398483 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
MRPL48-203ENST00000398483 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
MRPL48-203ENST00000398483 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
MRPL48-203ENST00000398483 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
MRPL48-203ENST00000398483 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
MRPL48-203ENST00000398483 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
MRPL48-203ENST00000398483 EIF4G3O43432 1585 aaKnown RBP22.99■■□□□ 1.27
MRPL48-203ENST00000398483 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
MRPL48-203ENST00000398483 ARHGEF11O15085 1522 aa22.94■■□□□ 1.26
MRPL48-203ENST00000398483 TARBP1Q13395 1621 aaKnown RBP22.91■■□□□ 1.26
MRPL48-203ENST00000398483 FBLN2P98095 1184 aa22.91■■□□□ 1.26
MRPL48-203ENST00000398483 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
MRPL48-203ENST00000398483 POLA1P09884 1462 aaPredicted RBP22.89■■□□□ 1.25
MRPL48-203ENST00000398483 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
MRPL48-203ENST00000398483 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
MRPL48-203ENST00000398483 CHD1O14646 1710 aa22.88■■□□□ 1.25
MRPL48-203ENST00000398483 TDRD9Q8NDG6 1382 aaKnown RBP22.85■■□□□ 1.25
MRPL48-203ENST00000398483 SOGA1O94964 1423 aa22.78■■□□□ 1.24
MRPL48-203ENST00000398483 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
MRPL48-203ENST00000398483 FGD5Q6ZNL6 1462 aa22.74■■□□□ 1.23
MRPL48-203ENST00000398483 CUX1P39880 1505 aa22.72■■□□□ 1.23
MRPL48-203ENST00000398483 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
MRPL48-203ENST00000398483 TRHP20396 242 aaPredicted RBP22.66■■□□□ 1.22
MRPL48-203ENST00000398483 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
MRPL48-203ENST00000398483 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
MRPL48-203ENST00000398483 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
MRPL48-203ENST00000398483 GRIN2BQ13224 1484 aa22.54■■□□□ 1.2
MRPL48-203ENST00000398483 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
MRPL48-203ENST00000398483 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
MRPL48-203ENST00000398483 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
MRPL48-203ENST00000398483 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
MRPL48-203ENST00000398483 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
MRPL48-203ENST00000398483 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
MRPL48-203ENST00000398483 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
MRPL48-203ENST00000398483 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.18
MRPL48-203ENST00000398483 ERCC6L2Q5T890 1561 aa22.37■■□□□ 1.17
MRPL48-203ENST00000398483 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
MRPL48-203ENST00000398483 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
MRPL48-203ENST00000398483 CEP170Q5SW79 1584 aa22.26■■□□□ 1.15
MRPL48-203ENST00000398483 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
MRPL48-203ENST00000398483 TOP2BQ02880 1626 aa22.22■■□□□ 1.15
MRPL48-203ENST00000398483 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
MRPL48-203ENST00000398483 NUP160Q12769 1436 aa22.2■■□□□ 1.14
MRPL48-203ENST00000398483 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
MRPL48-203ENST00000398483 SHROOM2Q13796 1616 aa22.08■■□□□ 1.13
MRPL48-203ENST00000398483 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
MRPL48-203ENST00000398483 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
MRPL48-203ENST00000398483 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
MRPL48-203ENST00000398483 JPH4Q96JJ6 628 aa22.03■■□□□ 1.12
MRPL48-203ENST00000398483 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms