RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
SNORD88C-201ENST00000408061 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
SNORD88C-201ENST00000408061 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
SNORD88C-201ENST00000408061 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
SNORD88C-201ENST00000408061 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
SNORD88C-201ENST00000408061 ABCC9O60706 1549 aa19.2■□□□□ 0.66
SNORD88C-201ENST00000408061 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
SNORD88C-201ENST00000408061 NACADO15069 1562 aa19.11■□□□□ 0.65
SNORD88C-201ENST00000408061 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
SNORD88C-201ENST00000408061 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
SNORD88C-201ENST00000408061 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
SNORD88C-201ENST00000408061 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
SNORD88C-201ENST00000408061 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
SNORD88C-201ENST00000408061 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
SNORD88C-201ENST00000408061 BAZ1AQ9NRL2 1556 aaPredicted RBP18.11■□□□□ 0.49
SNORD88C-201ENST00000408061 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
SNORD88C-201ENST00000408061 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
SNORD88C-201ENST00000408061 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
SNORD88C-201ENST00000408061 MROH2BQ7Z745 1585 aa17.99■□□□□ 0.47
SNORD88C-201ENST00000408061 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
SNORD88C-201ENST00000408061 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
SNORD88C-201ENST00000408061 WIZO95785 1651 aa17.83■□□□□ 0.44
SNORD88C-201ENST00000408061 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
SNORD88C-201ENST00000408061 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
SNORD88C-201ENST00000408061 EIF4G1Q04637 1599 aaKnown RBP17.71■□□□□ 0.43
SNORD88C-201ENST00000408061 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
SNORD88C-201ENST00000408061 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
SNORD88C-201ENST00000408061 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
SNORD88C-201ENST00000408061 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
SNORD88C-201ENST00000408061 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
SNORD88C-201ENST00000408061 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
SNORD88C-201ENST00000408061 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
SNORD88C-201ENST00000408061 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
SNORD88C-201ENST00000408061 CFTRP13569 1480 aa17.18■□□□□ 0.34
SNORD88C-201ENST00000408061 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
SNORD88C-201ENST00000408061 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
SNORD88C-201ENST00000408061 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
SNORD88C-201ENST00000408061 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
SNORD88C-201ENST00000408061 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.32
SNORD88C-201ENST00000408061 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
SNORD88C-201ENST00000408061 EEA1Q15075 1411 aa16.95■□□□□ 0.3
SNORD88C-201ENST00000408061 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
SNORD88C-201ENST00000408061 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
SNORD88C-201ENST00000408061 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
SNORD88C-201ENST00000408061 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
SNORD88C-201ENST00000408061 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
SNORD88C-201ENST00000408061 CUX1P39880 1505 aa16.83■□□□□ 0.28
SNORD88C-201ENST00000408061 NESP48681 1621 aa16.81■□□□□ 0.28
SNORD88C-201ENST00000408061 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
SNORD88C-201ENST00000408061 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
SNORD88C-201ENST00000408061 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
SNORD88C-201ENST00000408061 SOGA1O94964 1423 aa16.73■□□□□ 0.27
SNORD88C-201ENST00000408061 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
SNORD88C-201ENST00000408061 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
SNORD88C-201ENST00000408061 LOC105371045A0A1W2PR82 267 aa16.69■□□□□ 0.26
SNORD88C-201ENST00000408061 KIF27Q86VH2 1401 aa16.68■□□□□ 0.26
SNORD88C-201ENST00000408061 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
SNORD88C-201ENST00000408061 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
SNORD88C-201ENST00000408061 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
SNORD88C-201ENST00000408061 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
SNORD88C-201ENST00000408061 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
SNORD88C-201ENST00000408061 KIF21BO75037 1637 aa16.62■□□□□ 0.25
SNORD88C-201ENST00000408061 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
SNORD88C-201ENST00000408061 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
SNORD88C-201ENST00000408061 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
SNORD88C-201ENST00000408061 TNIKQ9UKE5 1360 aa16.56■□□□□ 0.24
SNORD88C-201ENST00000408061 CUX2O14529 1486 aa16.55■□□□□ 0.24
SNORD88C-201ENST00000408061 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
SNORD88C-201ENST00000408061 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
SNORD88C-201ENST00000408061 WDR62O43379 1518 aa16.53■□□□□ 0.24
SNORD88C-201ENST00000408061 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
SNORD88C-201ENST00000408061 IGF1RP08069 1367 aa16.5■□□□□ 0.23
SNORD88C-201ENST00000408061 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
SNORD88C-201ENST00000408061 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
SNORD88C-201ENST00000408061 UBTFP17480 764 aaKnown RBP16.47■□□□□ 0.23
SNORD88C-201ENST00000408061 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
SNORD88C-201ENST00000408061 IFT140Q96RY7 1462 aa16.45■□□□□ 0.22
SNORD88C-201ENST00000408061 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
SNORD88C-201ENST00000408061 CUL7Q14999 1698 aa16.43■□□□□ 0.22
SNORD88C-201ENST00000408061 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
SNORD88C-201ENST00000408061 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
SNORD88C-201ENST00000408061 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
SNORD88C-201ENST00000408061 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
SNORD88C-201ENST00000408061 CEP162Q5TB80 1403 aa16.37■□□□□ 0.21
SNORD88C-201ENST00000408061 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
SNORD88C-201ENST00000408061 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
SNORD88C-201ENST00000408061 GRIN2BQ13224 1484 aa16.31■□□□□ 0.2
SNORD88C-201ENST00000408061 CLIP1P30622 1438 aa16.28■□□□□ 0.2
SNORD88C-201ENST00000408061 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
SNORD88C-201ENST00000408061 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
SNORD88C-201ENST00000408061 AQRO60306 1485 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNORD88C-201ENST00000408061 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
SNORD88C-201ENST00000408061 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
SNORD88C-201ENST00000408061 EIF4G3O43432 1585 aaKnown RBP16.2■□□□□ 0.18
SNORD88C-201ENST00000408061 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
SNORD88C-201ENST00000408061 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
SNORD88C-201ENST00000408061 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
SNORD88C-201ENST00000408061 EFCAB5A4FU69 1503 aa16.14■□□□□ 0.18
SNORD88C-201ENST00000408061 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
SNORD88C-201ENST00000408061 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms