RNA–Protein interactions for RNA: ENST00000469211.1

TRO-219, Transcript of trophinin, humanhuman

TSL 2

Gene TRO, Length 842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-219ENST00000469211 NISCHQ9Y2I1 1504 aa22.96■■□□□ 1.27
TRO-219ENST00000469211 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
TRO-219ENST00000469211 CCDC180Q9P1Z9 1646 aa20.23■□□□□ 0.83
TRO-219ENST00000469211 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
TRO-219ENST00000469211 ABCC9O60706 1549 aa19.66■□□□□ 0.74
TRO-219ENST00000469211 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
TRO-219ENST00000469211 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
TRO-219ENST00000469211 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
TRO-219ENST00000469211 NACADO15069 1562 aa18.89■□□□□ 0.62
TRO-219ENST00000469211 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
TRO-219ENST00000469211 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
TRO-219ENST00000469211 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
TRO-219ENST00000469211 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
TRO-219ENST00000469211 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRO-219ENST00000469211 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
TRO-219ENST00000469211 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
TRO-219ENST00000469211 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
TRO-219ENST00000469211 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
TRO-219ENST00000469211 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
TRO-219ENST00000469211 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
TRO-219ENST00000469211 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.44
TRO-219ENST00000469211 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
TRO-219ENST00000469211 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
TRO-219ENST00000469211 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.43
TRO-219ENST00000469211 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
TRO-219ENST00000469211 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
TRO-219ENST00000469211 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
TRO-219ENST00000469211 WIZO95785 1651 aa17.51■□□□□ 0.39
TRO-219ENST00000469211 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
TRO-219ENST00000469211 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
TRO-219ENST00000469211 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
TRO-219ENST00000469211 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
TRO-219ENST00000469211 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
TRO-219ENST00000469211 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
TRO-219ENST00000469211 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
TRO-219ENST00000469211 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
TRO-219ENST00000469211 NESP48681 1621 aa16.99■□□□□ 0.31
TRO-219ENST00000469211 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
TRO-219ENST00000469211 CFTRP13569 1480 aa16.95■□□□□ 0.3
TRO-219ENST00000469211 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
TRO-219ENST00000469211 LAMC3Q9Y6N6 1575 aa16.9■□□□□ 0.3
TRO-219ENST00000469211 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
TRO-219ENST00000469211 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
TRO-219ENST00000469211 CUX2O14529 1486 aa16.78■□□□□ 0.28
TRO-219ENST00000469211 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.27
TRO-219ENST00000469211 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
TRO-219ENST00000469211 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
TRO-219ENST00000469211 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
TRO-219ENST00000469211 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
TRO-219ENST00000469211 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
TRO-219ENST00000469211 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
TRO-219ENST00000469211 CUX1P39880 1505 aa16.6■□□□□ 0.25
TRO-219ENST00000469211 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
TRO-219ENST00000469211 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
TRO-219ENST00000469211 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
TRO-219ENST00000469211 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
TRO-219ENST00000469211 WDR62O43379 1518 aa16.56■□□□□ 0.24
TRO-219ENST00000469211 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
TRO-219ENST00000469211 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
TRO-219ENST00000469211 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
TRO-219ENST00000469211 DNAJC5Q9H3Z4 198 aa16.5■□□□□ 0.23
TRO-219ENST00000469211 FGD5Q6ZNL6 1462 aa16.45■□□□□ 0.22
TRO-219ENST00000469211 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
TRO-219ENST00000469211 TRIM41Q8WV44 630 aa16.4■□□□□ 0.22
TRO-219ENST00000469211 TARBP1Q13395 1621 aaKnown RBP16.35■□□□□ 0.21
TRO-219ENST00000469211 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
TRO-219ENST00000469211 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
TRO-219ENST00000469211 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
TRO-219ENST00000469211 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
TRO-219ENST00000469211 SOGA1O94964 1423 aa16.31■□□□□ 0.2
TRO-219ENST00000469211 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
TRO-219ENST00000469211 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
TRO-219ENST00000469211 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
TRO-219ENST00000469211 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
TRO-219ENST00000469211 EIF4G3O43432 1585 aaKnown RBP16.2■□□□□ 0.18
TRO-219ENST00000469211 EEA1Q15075 1411 aa16.19■□□□□ 0.18
TRO-219ENST00000469211 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
TRO-219ENST00000469211 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
TRO-219ENST00000469211 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRO-219ENST00000469211 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
TRO-219ENST00000469211 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
TRO-219ENST00000469211 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
TRO-219ENST00000469211 IGF1RP08069 1367 aa16.1■□□□□ 0.17
TRO-219ENST00000469211 ADAMTS12P58397 1594 aa16.06■□□□□ 0.16
TRO-219ENST00000469211 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
TRO-219ENST00000469211 CUL7Q14999 1698 aa16.05■□□□□ 0.16
TRO-219ENST00000469211 SNAPC4Q5SXM2 1469 aa16.04■□□□□ 0.16
TRO-219ENST00000469211 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
TRO-219ENST00000469211 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
TRO-219ENST00000469211 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
TRO-219ENST00000469211 KIF21BO75037 1637 aa16.03■□□□□ 0.16
TRO-219ENST00000469211 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
TRO-219ENST00000469211 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
TRO-219ENST00000469211 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
TRO-219ENST00000469211 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
TRO-219ENST00000469211 CHD1O14646 1710 aa15.96■□□□□ 0.15
TRO-219ENST00000469211 SYNJ2O15056 1496 aa15.96■□□□□ 0.14
TRO-219ENST00000469211 GOLGA3Q08378 1498 aa15.95■□□□□ 0.14
TRO-219ENST00000469211 ADRA2BP18089 450 aa15.92■□□□□ 0.14
TRO-219ENST00000469211 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms