RNA–Protein interactions for RNA: ENST00000520371.5

CCNC-209, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-209ENST00000520371 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
CCNC-209ENST00000520371 CCDC180Q9P1Z9 1646 aa29.22■■■□□ 2.27
CCNC-209ENST00000520371 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
CCNC-209ENST00000520371 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
CCNC-209ENST00000520371 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
CCNC-209ENST00000520371 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.12
CCNC-209ENST00000520371 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
CCNC-209ENST00000520371 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.03
CCNC-209ENST00000520371 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
CCNC-209ENST00000520371 ABCC9O60706 1549 aa27.32■■□□□ 1.96
CCNC-209ENST00000520371 SCRIBQ14160 1630 aa27.14■■□□□ 1.93
CCNC-209ENST00000520371 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
CCNC-209ENST00000520371 NACADO15069 1562 aa27.02■■□□□ 1.92
CCNC-209ENST00000520371 HRCP23327 699 aa26.88■■□□□ 1.89
CCNC-209ENST00000520371 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
CCNC-209ENST00000520371 PCGF6Q9BYE7 350 aa26.75■■□□□ 1.87
CCNC-209ENST00000520371 LOC105371045A0A1W2PR82 267 aa26.73■■□□□ 1.87
CCNC-209ENST00000520371 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
CCNC-209ENST00000520371 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
CCNC-209ENST00000520371 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
CCNC-209ENST00000520371 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
CCNC-209ENST00000520371 BAZ1AQ9NRL2 1556 aaPredicted RBP26.35■■□□□ 1.81
CCNC-209ENST00000520371 WIZO95785 1651 aa26.32■■□□□ 1.8
CCNC-209ENST00000520371 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
CCNC-209ENST00000520371 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
CCNC-209ENST00000520371 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
CCNC-209ENST00000520371 SMARCA4P51532 1647 aa26.05■■□□□ 1.76
CCNC-209ENST00000520371 PPARGC1BQ86YN6 1023 aaKnown RBP26.05■■□□□ 1.76
CCNC-209ENST00000520371 ZEB1P37275 1124 aaPredicted RBP26.02■■□□□ 1.76
CCNC-209ENST00000520371 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
CCNC-209ENST00000520371 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.73
CCNC-209ENST00000520371 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
CCNC-209ENST00000520371 EHMT2Q96KQ7 1210 aa25.78■■□□□ 1.72
CCNC-209ENST00000520371 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
CCNC-209ENST00000520371 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
CCNC-209ENST00000520371 EEA1Q15075 1411 aa25.67■■□□□ 1.7
CCNC-209ENST00000520371 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
CCNC-209ENST00000520371 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.68
CCNC-209ENST00000520371 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
CCNC-209ENST00000520371 TNIKQ9UKE5 1360 aa25.53■■□□□ 1.68
CCNC-209ENST00000520371 SOGA1O94964 1423 aa25.49■■□□□ 1.67
CCNC-209ENST00000520371 CSRNP3Q8WYN3 585 aa25.48■■□□□ 1.67
CCNC-209ENST00000520371 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
CCNC-209ENST00000520371 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.65
CCNC-209ENST00000520371 GOLGA3Q08378 1498 aa25.37■■□□□ 1.65
CCNC-209ENST00000520371 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
CCNC-209ENST00000520371 UBTFP17480 764 aaKnown RBP25.3■■□□□ 1.64
CCNC-209ENST00000520371 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
CCNC-209ENST00000520371 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
CCNC-209ENST00000520371 CEP164Q9UPV0 1460 aa25.24■■□□□ 1.63
CCNC-209ENST00000520371 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
CCNC-209ENST00000520371 KIF21BO75037 1637 aa25.2■■□□□ 1.62
CCNC-209ENST00000520371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.18■■□□□ 1.62
CCNC-209ENST00000520371 CLIP1P30622 1438 aa25.02■■□□□ 1.6
CCNC-209ENST00000520371 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
CCNC-209ENST00000520371 HMGXB3Q12766 1538 aa24.99■■□□□ 1.59
CCNC-209ENST00000520371 TTBK1Q5TCY1 1321 aaPredicted RBP24.98■■□□□ 1.59
CCNC-209ENST00000520371 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
CCNC-209ENST00000520371 VPS8Q8N3P4 1428 aa24.95■■□□□ 1.58
CCNC-209ENST00000520371 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
CCNC-209ENST00000520371 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
CCNC-209ENST00000520371 APLP2Q06481 763 aa24.87■■□□□ 1.57
CCNC-209ENST00000520371 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
CCNC-209ENST00000520371 PRXQ9BXM0 1461 aa24.78■■□□□ 1.56
CCNC-209ENST00000520371 DIEXFQ68CQ4 756 aaKnown RBP24.75■■□□□ 1.55
CCNC-209ENST00000520371 CFTRP13569 1480 aa24.74■■□□□ 1.55
CCNC-209ENST00000520371 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
CCNC-209ENST00000520371 CUX1P39880 1505 aa24.7■■□□□ 1.54
CCNC-209ENST00000520371 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.53
CCNC-209ENST00000520371 ZNF316A6NFI3 1004 aaPredicted RBP24.63■■□□□ 1.53
CCNC-209ENST00000520371 SCAF1Q9H7N4 1312 aaKnown RBP24.62■■□□□ 1.53
CCNC-209ENST00000520371 ARAP1Q96P48 1450 aa24.58■■□□□ 1.52
CCNC-209ENST00000520371 RANGAP1P46060 587 aaPredicted RBP24.57■■□□□ 1.52
CCNC-209ENST00000520371 ACIN1Q9UKV3 1341 aaKnown RBP24.55■■□□□ 1.52
CCNC-209ENST00000520371 CENPBP07199 599 aaPredicted RBP24.54■■□□□ 1.52
CCNC-209ENST00000520371 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
CCNC-209ENST00000520371 CLSPNQ9HAW4 1339 aa24.49■■□□□ 1.51
CCNC-209ENST00000520371 PELP1Q8IZL8 1130 aaKnown RBP24.46■■□□□ 1.51
CCNC-209ENST00000520371 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
CCNC-209ENST00000520371 NEUROD1Q13562 356 aa24.39■■□□□ 1.49
CCNC-209ENST00000520371 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
CCNC-209ENST00000520371 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
CCNC-209ENST00000520371 CUX2O14529 1486 aa24.37■■□□□ 1.49
CCNC-209ENST00000520371 IGF1RP08069 1367 aa24.37■■□□□ 1.49
CCNC-209ENST00000520371 KANK4Q5T7N3 995 aaPredicted RBP24.35■■□□□ 1.49
CCNC-209ENST00000520371 MAP3K1Q13233 1512 aa24.28■■□□□ 1.48
CCNC-209ENST00000520371 DHX57Q6P158 1386 aaKnown RBP24.28■■□□□ 1.48
CCNC-209ENST00000520371 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
CCNC-209ENST00000520371 CARMIL1Q5VZK9 1371 aa24.28■■□□□ 1.48
CCNC-209ENST00000520371 CCNB3Q8WWL7 1395 aa24.25■■□□□ 1.47
CCNC-209ENST00000520371 CC2D2AQ9P2K1 1620 aa24.2■■□□□ 1.46
CCNC-209ENST00000520371 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
CCNC-209ENST00000520371 GTF3C3Q9Y5Q9 886 aa24.18■■□□□ 1.46
CCNC-209ENST00000520371 FHAD1B1AJZ9 1412 aa24.16■■□□□ 1.46
CCNC-209ENST00000520371 TIAM1Q13009 1591 aa24.15■■□□□ 1.46
CCNC-209ENST00000520371 MIER1Q8N108 512 aa24.13■■□□□ 1.45
CCNC-209ENST00000520371 DNMBPQ6XZF7 1577 aa24.12■■□□□ 1.45
CCNC-209ENST00000520371 ABCA10Q8WWZ4 1543 aa24.08■■□□□ 1.45
CCNC-209ENST00000520371 LRRC9Q6ZRR7 1453 aa24.07■■□□□ 1.44
CCNC-209ENST00000520371 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms