RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 NISCHQ9Y2I1 1504 aa26.17■■□□□ 1.78
TRO-215ENST00000445561 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
TRO-215ENST00000445561 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
TRO-215ENST00000445561 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
TRO-215ENST00000445561 SUPT5HO00267 1087 aaKnown RBP21.99■■□□□ 1.11
TRO-215ENST00000445561 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
TRO-215ENST00000445561 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
TRO-215ENST00000445561 CHIC1Q5VXU3 224 aa21.33■■□□□ 1
TRO-215ENST00000445561 MYO15BQ96JP2 1530 aa21.27■□□□□ 0.99
TRO-215ENST00000445561 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
TRO-215ENST00000445561 ABCC9O60706 1549 aa20.88■□□□□ 0.93
TRO-215ENST00000445561 LOC105371045A0A1W2PR82 267 aa20.75■□□□□ 0.91
TRO-215ENST00000445561 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
TRO-215ENST00000445561 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
TRO-215ENST00000445561 HRCP23327 699 aa20.64■□□□□ 0.89
TRO-215ENST00000445561 NACADO15069 1562 aa20.54■□□□□ 0.88
TRO-215ENST00000445561 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
TRO-215ENST00000445561 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
TRO-215ENST00000445561 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
TRO-215ENST00000445561 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
TRO-215ENST00000445561 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
TRO-215ENST00000445561 PPARGC1BQ86YN6 1023 aaKnown RBP20.3■□□□□ 0.84
TRO-215ENST00000445561 WIZO95785 1651 aa20.27■□□□□ 0.84
TRO-215ENST00000445561 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
TRO-215ENST00000445561 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
TRO-215ENST00000445561 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
TRO-215ENST00000445561 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
TRO-215ENST00000445561 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
TRO-215ENST00000445561 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
TRO-215ENST00000445561 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
TRO-215ENST00000445561 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
TRO-215ENST00000445561 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
TRO-215ENST00000445561 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.774e-7■■□□□ 14.5
TRO-215ENST00000445561 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
TRO-215ENST00000445561 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
TRO-215ENST00000445561 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
TRO-215ENST00000445561 SOGA1O94964 1423 aa19.66■□□□□ 0.74
TRO-215ENST00000445561 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
TRO-215ENST00000445561 TTBK1Q5TCY1 1321 aaPredicted RBP19.55■□□□□ 0.72
TRO-215ENST00000445561 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
TRO-215ENST00000445561 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
TRO-215ENST00000445561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.51■□□□□ 0.71
TRO-215ENST00000445561 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
TRO-215ENST00000445561 UBTFP17480 764 aaKnown RBP19.49■□□□□ 0.71
TRO-215ENST00000445561 TNIKQ9UKE5 1360 aa19.48■□□□□ 0.71
TRO-215ENST00000445561 WRNQ14191 1432 aaPredicted RBP eCLIP19.48■□□□□ 0.71
TRO-215ENST00000445561 EEA1Q15075 1411 aa19.46■□□□□ 0.71
TRO-215ENST00000445561 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
TRO-215ENST00000445561 CCER1Q8TC90 406 aaPredicted RBP19.42■□□□□ 0.7
TRO-215ENST00000445561 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.7
TRO-215ENST00000445561 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
TRO-215ENST00000445561 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
TRO-215ENST00000445561 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
TRO-215ENST00000445561 KIF21BO75037 1637 aa19.21■□□□□ 0.67
TRO-215ENST00000445561 CLIP1P30622 1438 aa19.18■□□□□ 0.66
TRO-215ENST00000445561 RANGAP1P46060 587 aaPredicted RBP19.18■□□□□ 0.66
TRO-215ENST00000445561 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
TRO-215ENST00000445561 TOP2BQ02880 1626 aa19.12■□□□□ 0.65
TRO-215ENST00000445561 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
TRO-215ENST00000445561 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
TRO-215ENST00000445561 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
TRO-215ENST00000445561 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
TRO-215ENST00000445561 BIVM-ERCC5R4GMW8 1640 aa19.02■□□□□ 0.64
TRO-215ENST00000445561 DIEXFQ68CQ4 756 aaKnown RBP19.02■□□□□ 0.64
TRO-215ENST00000445561 APLP2Q06481 763 aa19.01■□□□□ 0.63
TRO-215ENST00000445561 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
TRO-215ENST00000445561 CUX1P39880 1505 aa18.97■□□□□ 0.63
TRO-215ENST00000445561 PRXQ9BXM0 1461 aa18.94■□□□□ 0.62
TRO-215ENST00000445561 ERICH3Q5RHP9 1530 aa18.9■□□□□ 0.62
TRO-215ENST00000445561 CFTRP13569 1480 aa18.9■□□□□ 0.62
TRO-215ENST00000445561 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
TRO-215ENST00000445561 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
TRO-215ENST00000445561 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
TRO-215ENST00000445561 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
TRO-215ENST00000445561 ACIN1Q9UKV3 1341 aaKnown RBP18.83■□□□□ 0.61
TRO-215ENST00000445561 KANK4Q5T7N3 995 aaPredicted RBP18.82■□□□□ 0.6
TRO-215ENST00000445561 CUX2O14529 1486 aa18.71■□□□□ 0.59
TRO-215ENST00000445561 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
TRO-215ENST00000445561 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
TRO-215ENST00000445561 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.58
TRO-215ENST00000445561 IGF1RP08069 1367 aa18.68■□□□□ 0.58
TRO-215ENST00000445561 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
TRO-215ENST00000445561 GTF3C3Q9Y5Q9 886 aa18.65■□□□□ 0.58
TRO-215ENST00000445561 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
TRO-215ENST00000445561 MIER1Q8N108 512 aa18.64■□□□□ 0.57
TRO-215ENST00000445561 FGD5Q6ZNL6 1462 aa18.64■□□□□ 0.57
TRO-215ENST00000445561 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
TRO-215ENST00000445561 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
TRO-215ENST00000445561 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
TRO-215ENST00000445561 ITGAEP38570 1179 aa18.59■□□□□ 0.57
TRO-215ENST00000445561 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
TRO-215ENST00000445561 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.56
TRO-215ENST00000445561 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
TRO-215ENST00000445561 FANCD2Q9BXW9 1451 aa18.53■□□□□ 0.56
TRO-215ENST00000445561 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
TRO-215ENST00000445561 RAD54L2Q9Y4B4 1467 aa18.48■□□□□ 0.55
TRO-215ENST00000445561 TIAM1Q13009 1591 aa18.48■□□□□ 0.55
TRO-215ENST00000445561 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
TRO-215ENST00000445561 NESP48681 1621 aa18.45■□□□□ 0.54
TRO-215ENST00000445561 ATP1B4Q9UN42 357 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms