RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
GARNL3-222ENST00000498801 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
GARNL3-222ENST00000498801 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
GARNL3-222ENST00000498801 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
GARNL3-222ENST00000498801 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
GARNL3-222ENST00000498801 FOXD1Q16676 465 aa19.87■□□□□ 0.77
GARNL3-222ENST00000498801 ADRA2BP18089 450 aa19.51■□□□□ 0.71
GARNL3-222ENST00000498801 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
GARNL3-222ENST00000498801 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
GARNL3-222ENST00000498801 KCNA4P22459 653 aa18.49■□□□□ 0.55
GARNL3-222ENST00000498801 PPP4R3CPQ6ZMV5 832 aa18.34■□□□□ 0.53
GARNL3-222ENST00000498801 MSH5O43196 834 aa18.11■□□□□ 0.49
GARNL3-222ENST00000498801 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
GARNL3-222ENST00000498801 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
GARNL3-222ENST00000498801 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
GARNL3-222ENST00000498801 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
GARNL3-222ENST00000498801 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
GARNL3-222ENST00000498801 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
GARNL3-222ENST00000498801 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
GARNL3-222ENST00000498801 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
GARNL3-222ENST00000498801 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
GARNL3-222ENST00000498801 RNF216Q9NWF9 866 aaPredicted RBP17.24■□□□□ 0.35
GARNL3-222ENST00000498801 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
GARNL3-222ENST00000498801 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
GARNL3-222ENST00000498801 HOXD11P31277 338 aaPredicted RBP17.06■□□□□ 0.32
GARNL3-222ENST00000498801 ZBTB22O15209 634 aa17.05■□□□□ 0.32
GARNL3-222ENST00000498801 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
GARNL3-222ENST00000498801 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
GARNL3-222ENST00000498801 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
GARNL3-222ENST00000498801 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
GARNL3-222ENST00000498801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
GARNL3-222ENST00000498801 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
GARNL3-222ENST00000498801 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
GARNL3-222ENST00000498801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
GARNL3-222ENST00000498801 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
GARNL3-222ENST00000498801 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
GARNL3-222ENST00000498801 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
GARNL3-222ENST00000498801 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
GARNL3-222ENST00000498801 APLP2Q06481 763 aa15.7■□□□□ 0.1
GARNL3-222ENST00000498801 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
GARNL3-222ENST00000498801 FKBP8Q14318 412 aa15.62■□□□□ 0.09
GARNL3-222ENST00000498801 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
GARNL3-222ENST00000498801 RNF39Q9H2S5 420 aa15.58■□□□□ 0.08
GARNL3-222ENST00000498801 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
GARNL3-222ENST00000498801 C1QBPQ07021 282 aaKnown RBP15.41■□□□□ 0.06
GARNL3-222ENST00000498801 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
GARNL3-222ENST00000498801 CAPN15O75808 1086 aa15.35■□□□□ 0.05
GARNL3-222ENST00000498801 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.04
GARNL3-222ENST00000498801 POLA2Q14181 598 aa15.26■□□□□ 0.03
GARNL3-222ENST00000498801 ABCC9O60706 1549 aa15.24■□□□□ 0.03
GARNL3-222ENST00000498801 FBLN2P98095 1184 aa15.19■□□□□ 0.02
GARNL3-222ENST00000498801 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
GARNL3-222ENST00000498801 ABCB7O75027 752 aa15.13■□□□□ 0.01
GARNL3-222ENST00000498801 AMER1Q5JTC6 1135 aaPredicted RBP15.1■□□□□ 0.01
GARNL3-222ENST00000498801 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
GARNL3-222ENST00000498801 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
GARNL3-222ENST00000498801 DSG3P32926 999 aa14.99□□□□□ -0.01
GARNL3-222ENST00000498801 PROM2Q8N271 834 aa14.98□□□□□ -0.01
GARNL3-222ENST00000498801 MYO15BQ96JP2 1530 aa14.92□□□□□ -0.02
GARNL3-222ENST00000498801 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
GARNL3-222ENST00000498801 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
GARNL3-222ENST00000498801 NACADO15069 1562 aa14.85□□□□□ -0.03
GARNL3-222ENST00000498801 DCAF1Q9Y4B6 1507 aa14.85□□□□□ -0.03
GARNL3-222ENST00000498801 RB1CC1Q8TDY2 1594 aa14.8□□□□□ -0.04
GARNL3-222ENST00000498801 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
GARNL3-222ENST00000498801 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
GARNL3-222ENST00000498801 VASPP50552 380 aaPredicted RBP14.73□□□□□ -0.05
GARNL3-222ENST00000498801 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
GARNL3-222ENST00000498801 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
GARNL3-222ENST00000498801 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
GARNL3-222ENST00000498801 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
GARNL3-222ENST00000498801 SSUH2Q9Y2M2 353 aa14.65□□□□□ -0.06
GARNL3-222ENST00000498801 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
GARNL3-222ENST00000498801 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
GARNL3-222ENST00000498801 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
GARNL3-222ENST00000498801 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
GARNL3-222ENST00000498801 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
GARNL3-222ENST00000498801 SHROOM4Q9ULL8 1493 aa14.4□□□□□ -0.1
GARNL3-222ENST00000498801 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
GARNL3-222ENST00000498801 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
GARNL3-222ENST00000498801 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
GARNL3-222ENST00000498801 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
GARNL3-222ENST00000498801 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
GARNL3-222ENST00000498801 SPOCK2Q92563 424 aa14.29□□□□□ -0.12
GARNL3-222ENST00000498801 MIER1Q8N108 512 aa14.27□□□□□ -0.13
GARNL3-222ENST00000498801 PKD2Q13563 968 aa14.26□□□□□ -0.13
GARNL3-222ENST00000498801 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
GARNL3-222ENST00000498801 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
GARNL3-222ENST00000498801 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
GARNL3-222ENST00000498801 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
GARNL3-222ENST00000498801 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
GARNL3-222ENST00000498801 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-222ENST00000498801 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
GARNL3-222ENST00000498801 CLEC11AQ9Y240 323 aa14.04□□□□□ -0.16
GARNL3-222ENST00000498801 CIZ1Q9ULV3 898 aaPredicted RBP13.98□□□□□ -0.17
GARNL3-222ENST00000498801 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
GARNL3-222ENST00000498801 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
GARNL3-222ENST00000498801 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.17
GARNL3-222ENST00000498801 RGL2O15211 777 aa13.94□□□□□ -0.18
GARNL3-222ENST00000498801 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms