RNA–Protein interactions for RNA: ENST00000544140.5

MRPL48-213, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-213ENST00000544140 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
MRPL48-213ENST00000544140 ABCC9O60706 1549 aa27.54■■■□□ 2
MRPL48-213ENST00000544140 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
MRPL48-213ENST00000544140 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
MRPL48-213ENST00000544140 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
MRPL48-213ENST00000544140 NACADO15069 1562 aa26.06■■□□□ 1.76
MRPL48-213ENST00000544140 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
MRPL48-213ENST00000544140 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
MRPL48-213ENST00000544140 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
MRPL48-213ENST00000544140 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
MRPL48-213ENST00000544140 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
MRPL48-213ENST00000544140 PABPN1Q86U42 306 aaKnown RBP eCLIP25.6■■□□□ 1.69
MRPL48-213ENST00000544140 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
MRPL48-213ENST00000544140 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
MRPL48-213ENST00000544140 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
MRPL48-213ENST00000544140 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
MRPL48-213ENST00000544140 SCRIBQ14160 1630 aa24.98■■□□□ 1.59
MRPL48-213ENST00000544140 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
MRPL48-213ENST00000544140 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
MRPL48-213ENST00000544140 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
MRPL48-213ENST00000544140 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
MRPL48-213ENST00000544140 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
MRPL48-213ENST00000544140 DNAJC5Q9H3Z4 198 aa23.94■■□□□ 1.42
MRPL48-213ENST00000544140 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
MRPL48-213ENST00000544140 HMGXB3Q12766 1538 aa23.89■■□□□ 1.41
MRPL48-213ENST00000544140 SMARCA2P51531 1590 aa23.88■■□□□ 1.41
MRPL48-213ENST00000544140 CUX2O14529 1486 aa23.86■■□□□ 1.41
MRPL48-213ENST00000544140 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
MRPL48-213ENST00000544140 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
MRPL48-213ENST00000544140 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
MRPL48-213ENST00000544140 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
MRPL48-213ENST00000544140 NESP48681 1621 aa23.65■■□□□ 1.38
MRPL48-213ENST00000544140 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
MRPL48-213ENST00000544140 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
MRPL48-213ENST00000544140 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
MRPL48-213ENST00000544140 PDS5BQ9NTI5 1447 aa23.36■■□□□ 1.33
MRPL48-213ENST00000544140 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.33
MRPL48-213ENST00000544140 CADPSQ9ULU8 1353 aa23.31■■□□□ 1.32
MRPL48-213ENST00000544140 WIZO95785 1651 aa23.25■■□□□ 1.31
MRPL48-213ENST00000544140 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
MRPL48-213ENST00000544140 WDR62O43379 1518 aa23.15■■□□□ 1.3
MRPL48-213ENST00000544140 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.28
MRPL48-213ENST00000544140 CFTRP13569 1480 aa23.05■■□□□ 1.28
MRPL48-213ENST00000544140 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
MRPL48-213ENST00000544140 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
MRPL48-213ENST00000544140 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
MRPL48-213ENST00000544140 URB2Q14146 1524 aaKnown RBP22.86■■□□□ 1.25
MRPL48-213ENST00000544140 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
MRPL48-213ENST00000544140 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
MRPL48-213ENST00000544140 PRDM2Q13029 1718 aa22.76■■□□□ 1.23
MRPL48-213ENST00000544140 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
MRPL48-213ENST00000544140 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
MRPL48-213ENST00000544140 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
MRPL48-213ENST00000544140 IFT140Q96RY7 1462 aa22.61■■□□□ 1.21
MRPL48-213ENST00000544140 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
MRPL48-213ENST00000544140 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
MRPL48-213ENST00000544140 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
MRPL48-213ENST00000544140 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
MRPL48-213ENST00000544140 EIF4G3O43432 1585 aaKnown RBP22.43■■□□□ 1.18
MRPL48-213ENST00000544140 TARBP1Q13395 1621 aaKnown RBP22.42■■□□□ 1.18
MRPL48-213ENST00000544140 RIMBP3CA6NJZ7 1639 aa22.41■■□□□ 1.18
MRPL48-213ENST00000544140 RIMBP3BA6NNM3 1639 aa22.41■■□□□ 1.18
MRPL48-213ENST00000544140 RIMBP3Q9UFD9 1639 aa22.41■■□□□ 1.18
MRPL48-213ENST00000544140 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
MRPL48-213ENST00000544140 POLA1P09884 1462 aaPredicted RBP22.35■■□□□ 1.17
MRPL48-213ENST00000544140 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
MRPL48-213ENST00000544140 CHD1O14646 1710 aa22.25■■□□□ 1.15
MRPL48-213ENST00000544140 RAD54L2Q9Y4B4 1467 aa22.23■■□□□ 1.15
MRPL48-213ENST00000544140 SOGA1O94964 1423 aa22.22■■□□□ 1.15
MRPL48-213ENST00000544140 WDR97A6NE52 1622 aa22.21■■□□□ 1.15
MRPL48-213ENST00000544140 FGD5Q6ZNL6 1462 aa22.17■■□□□ 1.14
MRPL48-213ENST00000544140 TDRD9Q8NDG6 1382 aaKnown RBP22.17■■□□□ 1.14
MRPL48-213ENST00000544140 CUX1P39880 1505 aa22.16■■□□□ 1.14
MRPL48-213ENST00000544140 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
MRPL48-213ENST00000544140 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
MRPL48-213ENST00000544140 FBLN2P98095 1184 aa22.1■■□□□ 1.13
MRPL48-213ENST00000544140 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
MRPL48-213ENST00000544140 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
MRPL48-213ENST00000544140 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
MRPL48-213ENST00000544140 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
MRPL48-213ENST00000544140 SYNJ2O15056 1496 aa22.01■■□□□ 1.11
MRPL48-213ENST00000544140 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
MRPL48-213ENST00000544140 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
MRPL48-213ENST00000544140 ABCA10Q8WWZ4 1543 aa21.96■■□□□ 1.11
MRPL48-213ENST00000544140 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
MRPL48-213ENST00000544140 ABCA5Q8WWZ7 1642 aa21.93■■□□□ 1.1
MRPL48-213ENST00000544140 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
MRPL48-213ENST00000544140 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
MRPL48-213ENST00000544140 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
MRPL48-213ENST00000544140 WRNQ14191 1432 aaPredicted RBP eCLIP21.81■■□□□ 1.08
MRPL48-213ENST00000544140 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
MRPL48-213ENST00000544140 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
MRPL48-213ENST00000544140 GRIN2AQ12879 1464 aa21.77■■□□□ 1.08
MRPL48-213ENST00000544140 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
MRPL48-213ENST00000544140 NUP160Q12769 1436 aa21.75■■□□□ 1.07
MRPL48-213ENST00000544140 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
MRPL48-213ENST00000544140 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
MRPL48-213ENST00000544140 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
MRPL48-213ENST00000544140 ERCC6L2Q5T890 1561 aa21.67■■□□□ 1.06
MRPL48-213ENST00000544140 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms