RNA–Protein interactions for RNA: ENST00000375041.6

TRO-204, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRO, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-204ENST00000375041 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.96
TRO-204ENST00000375041 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
TRO-204ENST00000375041 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
TRO-204ENST00000375041 CCDC180Q9P1Z9 1646 aa17.78■□□□□ 0.44
TRO-204ENST00000375041 SUPT5HO00267 1087 aaKnown RBP17.77■□□□□ 0.44
TRO-204ENST00000375041 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
TRO-204ENST00000375041 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
TRO-204ENST00000375041 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
TRO-204ENST00000375041 ABCC9O60706 1549 aa16.99■□□□□ 0.31
TRO-204ENST00000375041 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
TRO-204ENST00000375041 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
TRO-204ENST00000375041 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
TRO-204ENST00000375041 PCGF6Q9BYE7 350 aa16.8■□□□□ 0.28
TRO-204ENST00000375041 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.28
TRO-204ENST00000375041 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
TRO-204ENST00000375041 PPARGC1BQ86YN6 1023 aaKnown RBP16.64■□□□□ 0.25
TRO-204ENST00000375041 FAM9AQ8IZU1 332 aaPredicted RBP16.6■□□□□ 0.25
TRO-204ENST00000375041 NACADO15069 1562 aa16.55■□□□□ 0.24
TRO-204ENST00000375041 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
TRO-204ENST00000375041 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.23
TRO-204ENST00000375041 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
TRO-204ENST00000375041 HRCP23327 699 aa16.44■□□□□ 0.22
TRO-204ENST00000375041 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
TRO-204ENST00000375041 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.24e-7■■□□□ 14.5
TRO-204ENST00000375041 WIZO95785 1651 aa16.32■□□□□ 0.2
TRO-204ENST00000375041 TTBK1Q5TCY1 1321 aaPredicted RBP16.22■□□□□ 0.19
TRO-204ENST00000375041 BAZ1AQ9NRL2 1556 aaPredicted RBP16.14■□□□□ 0.17
TRO-204ENST00000375041 UNC13AQ9UPW8 1703 aa16.12■□□□□ 0.17
TRO-204ENST00000375041 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
TRO-204ENST00000375041 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.15
TRO-204ENST00000375041 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
TRO-204ENST00000375041 ABCC8Q09428 1581 aa15.97■□□□□ 0.15
TRO-204ENST00000375041 TOP2AP11388 1531 aaKnown RBP15.95■□□□□ 0.14
TRO-204ENST00000375041 BICRAQ9NZM4 1560 aa15.95■□□□□ 0.14
TRO-204ENST00000375041 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
TRO-204ENST00000375041 EIF4G1Q04637 1599 aaKnown RBP15.85■□□□□ 0.13
TRO-204ENST00000375041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
TRO-204ENST00000375041 SOGA1O94964 1423 aa15.8■□□□□ 0.12
TRO-204ENST00000375041 RANGAP1P46060 587 aaPredicted RBP15.8■□□□□ 0.12
TRO-204ENST00000375041 RUSC2Q8N2Y8 1516 aa15.75■□□□□ 0.11
TRO-204ENST00000375041 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
TRO-204ENST00000375041 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.11
TRO-204ENST00000375041 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
TRO-204ENST00000375041 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
TRO-204ENST00000375041 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
TRO-204ENST00000375041 CCER1Q8TC90 406 aaPredicted RBP15.65■□□□□ 0.1
TRO-204ENST00000375041 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
TRO-204ENST00000375041 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
TRO-204ENST00000375041 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
TRO-204ENST00000375041 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
TRO-204ENST00000375041 ZEB1P37275 1124 aaPredicted RBP15.48■□□□□ 0.07
TRO-204ENST00000375041 EEA1Q15075 1411 aa15.47■□□□□ 0.07
TRO-204ENST00000375041 GOLGA3Q08378 1498 aa15.46■□□□□ 0.06
TRO-204ENST00000375041 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
TRO-204ENST00000375041 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
TRO-204ENST00000375041 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
TRO-204ENST00000375041 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
TRO-204ENST00000375041 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
TRO-204ENST00000375041 YTHDC1Q96MU7 727 aaKnown RBP15.37■□□□□ 0.05
TRO-204ENST00000375041 CLIP1P30622 1438 aa15.35■□□□□ 0.05
TRO-204ENST00000375041 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
TRO-204ENST00000375041 APLP2Q06481 763 aa15.3■□□□□ 0.04
TRO-204ENST00000375041 HMGXB3Q12766 1538 aa15.29■□□□□ 0.04
TRO-204ENST00000375041 CUX1P39880 1505 aa15.27■□□□□ 0.03
TRO-204ENST00000375041 KIF21BO75037 1637 aa15.27■□□□□ 0.03
TRO-204ENST00000375041 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
TRO-204ENST00000375041 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
TRO-204ENST00000375041 CFTRP13569 1480 aa15.23■□□□□ 0.03
TRO-204ENST00000375041 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
TRO-204ENST00000375041 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
TRO-204ENST00000375041 ITGAEP38570 1179 aa15.18■□□□□ 0.02
TRO-204ENST00000375041 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
TRO-204ENST00000375041 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
TRO-204ENST00000375041 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
TRO-204ENST00000375041 PRXQ9BXM0 1461 aa15.14■□□□□ 0.01
TRO-204ENST00000375041 KANK4Q5T7N3 995 aaPredicted RBP15.13■□□□□ 0.01
TRO-204ENST00000375041 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
TRO-204ENST00000375041 CUX2O14529 1486 aa15.12■□□□□ 0.01
TRO-204ENST00000375041 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
TRO-204ENST00000375041 P3H3Q8IVL6 736 aa15.09■□□□□ 0.01
TRO-204ENST00000375041 ACIN1Q9UKV3 1341 aaKnown RBP15.07■□□□□ 0
TRO-204ENST00000375041 ARAP1Q96P48 1450 aa15.07■□□□□ 0
TRO-204ENST00000375041 NESP48681 1621 aa15.07■□□□□ 0
TRO-204ENST00000375041 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
TRO-204ENST00000375041 ATP1B4Q9UN42 357 aaPredicted RBP15.05■□□□□ 0
TRO-204ENST00000375041 IGF1RP08069 1367 aa15.05■□□□□ 0
TRO-204ENST00000375041 ERICH3Q5RHP9 1530 aa15.04■□□□□ -0
TRO-204ENST00000375041 FANCD2Q9BXW9 1451 aa15.02■□□□□ -0
TRO-204ENST00000375041 MIER1Q8N108 512 aa15.01□□□□□ -0.01
TRO-204ENST00000375041 CARMIL1Q5VZK9 1371 aa15□□□□□ -0.01
TRO-204ENST00000375041 RAD54L2Q9Y4B4 1467 aa15□□□□□ -0.01
TRO-204ENST00000375041 ZNF316A6NFI3 1004 aaPredicted RBP14.99□□□□□ -0.01
TRO-204ENST00000375041 ARHGAP35Q9NRY4 1499 aa14.98□□□□□ -0.01
TRO-204ENST00000375041 CENPBP07199 599 aaPredicted RBP14.94□□□□□ -0.02
TRO-204ENST00000375041 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
TRO-204ENST00000375041 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
TRO-204ENST00000375041 TDRD9Q8NDG6 1382 aaKnown RBP14.88□□□□□ -0.03
TRO-204ENST00000375041 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
TRO-204ENST00000375041 FAM50AQ14320 339 aaKnown RBP14.84□□□□□ -0.03
TRO-204ENST00000375041 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms