RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 NISCHQ9Y2I1 1504 aa22.84■■□□□ 1.25
MRPL48-204ENST00000411840 ABCC9O60706 1549 aa20.63■□□□□ 0.89
MRPL48-204ENST00000411840 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
MRPL48-204ENST00000411840 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
MRPL48-204ENST00000411840 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
MRPL48-204ENST00000411840 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
MRPL48-204ENST00000411840 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
MRPL48-204ENST00000411840 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
MRPL48-204ENST00000411840 NACADO15069 1562 aa19.41■□□□□ 0.7
MRPL48-204ENST00000411840 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
MRPL48-204ENST00000411840 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
MRPL48-204ENST00000411840 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
MRPL48-204ENST00000411840 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
MRPL48-204ENST00000411840 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
MRPL48-204ENST00000411840 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
MRPL48-204ENST00000411840 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
MRPL48-204ENST00000411840 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
MRPL48-204ENST00000411840 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
MRPL48-204ENST00000411840 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
MRPL48-204ENST00000411840 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
MRPL48-204ENST00000411840 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
MRPL48-204ENST00000411840 DNAJC5Q9H3Z4 198 aa17.96■□□□□ 0.47
MRPL48-204ENST00000411840 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
MRPL48-204ENST00000411840 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
MRPL48-204ENST00000411840 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
MRPL48-204ENST00000411840 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
MRPL48-204ENST00000411840 CUX2O14529 1486 aa17.79■□□□□ 0.44
MRPL48-204ENST00000411840 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
MRPL48-204ENST00000411840 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
MRPL48-204ENST00000411840 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
MRPL48-204ENST00000411840 NESP48681 1621 aa17.69■□□□□ 0.42
MRPL48-204ENST00000411840 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
MRPL48-204ENST00000411840 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
MRPL48-204ENST00000411840 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
MRPL48-204ENST00000411840 PDS5BQ9NTI5 1447 aa17.48■□□□□ 0.39
MRPL48-204ENST00000411840 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
MRPL48-204ENST00000411840 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
MRPL48-204ENST00000411840 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
MRPL48-204ENST00000411840 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
MRPL48-204ENST00000411840 WIZO95785 1651 aa17.35■□□□□ 0.37
MRPL48-204ENST00000411840 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
MRPL48-204ENST00000411840 RSF1Q96T23 1441 aaPredicted RBP17.24■□□□□ 0.35
MRPL48-204ENST00000411840 WDR62O43379 1518 aa17.24■□□□□ 0.35
MRPL48-204ENST00000411840 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
MRPL48-204ENST00000411840 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
MRPL48-204ENST00000411840 CFTRP13569 1480 aa17.19■□□□□ 0.34
MRPL48-204ENST00000411840 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
MRPL48-204ENST00000411840 TOP2AP11388 1531 aaKnown RBP17.13■□□□□ 0.33
MRPL48-204ENST00000411840 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
MRPL48-204ENST00000411840 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
MRPL48-204ENST00000411840 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
MRPL48-204ENST00000411840 IFT140Q96RY7 1462 aa16.88■□□□□ 0.29
MRPL48-204ENST00000411840 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
MRPL48-204ENST00000411840 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
MRPL48-204ENST00000411840 ABCC8Q09428 1581 aa16.83■□□□□ 0.28
MRPL48-204ENST00000411840 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
MRPL48-204ENST00000411840 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
MRPL48-204ENST00000411840 DNMBPQ6XZF7 1577 aa16.76■□□□□ 0.27
MRPL48-204ENST00000411840 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
MRPL48-204ENST00000411840 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
MRPL48-204ENST00000411840 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
MRPL48-204ENST00000411840 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
MRPL48-204ENST00000411840 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
MRPL48-204ENST00000411840 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
MRPL48-204ENST00000411840 FBLN2P98095 1184 aa16.69■□□□□ 0.26
MRPL48-204ENST00000411840 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
MRPL48-204ENST00000411840 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
MRPL48-204ENST00000411840 CYB5RLQ6IPT4 315 aa16.67■□□□□ 0.26
MRPL48-204ENST00000411840 SOGA1O94964 1423 aa16.65■□□□□ 0.26
MRPL48-204ENST00000411840 RAD54L2Q9Y4B4 1467 aa16.65■□□□□ 0.26
MRPL48-204ENST00000411840 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.26
MRPL48-204ENST00000411840 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
MRPL48-204ENST00000411840 CHD1O14646 1710 aa16.56■□□□□ 0.24
MRPL48-204ENST00000411840 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
MRPL48-204ENST00000411840 CUX1P39880 1505 aa16.53■□□□□ 0.24
MRPL48-204ENST00000411840 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
MRPL48-204ENST00000411840 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
MRPL48-204ENST00000411840 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
MRPL48-204ENST00000411840 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
MRPL48-204ENST00000411840 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
MRPL48-204ENST00000411840 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
MRPL48-204ENST00000411840 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
MRPL48-204ENST00000411840 CLASP1Q7Z460 1538 aa16.44■□□□□ 0.22
MRPL48-204ENST00000411840 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
MRPL48-204ENST00000411840 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
MRPL48-204ENST00000411840 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
MRPL48-204ENST00000411840 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
MRPL48-204ENST00000411840 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
MRPL48-204ENST00000411840 ABCA5Q8WWZ7 1642 aa16.31■□□□□ 0.2
MRPL48-204ENST00000411840 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
MRPL48-204ENST00000411840 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
MRPL48-204ENST00000411840 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
MRPL48-204ENST00000411840 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
MRPL48-204ENST00000411840 NUP160Q12769 1436 aa16.21■□□□□ 0.19
MRPL48-204ENST00000411840 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
MRPL48-204ENST00000411840 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
MRPL48-204ENST00000411840 ERCC6L2Q5T890 1561 aa16.19■□□□□ 0.18
MRPL48-204ENST00000411840 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
MRPL48-204ENST00000411840 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
MRPL48-204ENST00000411840 ERICH3Q5RHP9 1530 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms