RNA–Protein interactions for RNA: ENST00000542303.5

MRPL48-210, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3 BASIC

Gene MRPL48, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-210ENST00000542303 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
MRPL48-210ENST00000542303 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
MRPL48-210ENST00000542303 ABCC9O60706 1549 aa31.93■■■□□ 2.7
MRPL48-210ENST00000542303 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
MRPL48-210ENST00000542303 NACADO15069 1562 aa30.25■■■□□ 2.43
MRPL48-210ENST00000542303 DCAF8L2P0C7V8 631 aa30.14■■■□□ 2.42
MRPL48-210ENST00000542303 UNC13AQ9UPW8 1703 aa29.85■■■□□ 2.37
MRPL48-210ENST00000542303 MYO15BQ96JP2 1530 aa29.82■■■□□ 2.36
MRPL48-210ENST00000542303 DNAJC5BQ9UF47 199 aa29.74■■■□□ 2.35
MRPL48-210ENST00000542303 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
MRPL48-210ENST00000542303 ZCCHC6Q5VYS8 1495 aaKnown RBP29.65■■■□□ 2.34
MRPL48-210ENST00000542303 BICRAQ9NZM4 1560 aa29.53■■■□□ 2.32
MRPL48-210ENST00000542303 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
MRPL48-210ENST00000542303 SCRIBQ14160 1630 aa29.26■■■□□ 2.27
MRPL48-210ENST00000542303 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
MRPL48-210ENST00000542303 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
MRPL48-210ENST00000542303 EIF4G1Q04637 1599 aaKnown RBP28.83■■■□□ 2.21
MRPL48-210ENST00000542303 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
MRPL48-210ENST00000542303 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
MRPL48-210ENST00000542303 NCAPD3P42695 1498 aa27.88■■■□□ 2.05
MRPL48-210ENST00000542303 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.04
MRPL48-210ENST00000542303 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
MRPL48-210ENST00000542303 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.03
MRPL48-210ENST00000542303 HMGXB3Q12766 1538 aa27.74■■■□□ 2.03
MRPL48-210ENST00000542303 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
MRPL48-210ENST00000542303 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
MRPL48-210ENST00000542303 PEG3Q9GZU2 1588 aa27.57■■■□□ 2
MRPL48-210ENST00000542303 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
MRPL48-210ENST00000542303 NESP48681 1621 aa27.45■■□□□ 1.99
MRPL48-210ENST00000542303 CUX2O14529 1486 aa27.44■■□□□ 1.98
MRPL48-210ENST00000542303 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
MRPL48-210ENST00000542303 WIZO95785 1651 aa27.27■■□□□ 1.96
MRPL48-210ENST00000542303 DNAJC5Q9H3Z4 198 aa27.23■■□□□ 1.95
MRPL48-210ENST00000542303 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
MRPL48-210ENST00000542303 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
MRPL48-210ENST00000542303 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
MRPL48-210ENST00000542303 CADPSQ9ULU8 1353 aa27.04■■□□□ 1.92
MRPL48-210ENST00000542303 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
MRPL48-210ENST00000542303 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
MRPL48-210ENST00000542303 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
MRPL48-210ENST00000542303 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
MRPL48-210ENST00000542303 WDR62O43379 1518 aa26.81■■□□□ 1.88
MRPL48-210ENST00000542303 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
MRPL48-210ENST00000542303 CFTRP13569 1480 aa26.77■■□□□ 1.88
MRPL48-210ENST00000542303 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
MRPL48-210ENST00000542303 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
MRPL48-210ENST00000542303 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
MRPL48-210ENST00000542303 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
MRPL48-210ENST00000542303 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
MRPL48-210ENST00000542303 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
MRPL48-210ENST00000542303 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
MRPL48-210ENST00000542303 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
MRPL48-210ENST00000542303 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
MRPL48-210ENST00000542303 TRIM41Q8WV44 630 aa26.18■■□□□ 1.78
MRPL48-210ENST00000542303 EIF4G3O43432 1585 aaKnown RBP26.12■■□□□ 1.77
MRPL48-210ENST00000542303 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
MRPL48-210ENST00000542303 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
MRPL48-210ENST00000542303 AQRO60306 1485 aaKnown RBP eCLIP25.97■■□□□ 1.75
MRPL48-210ENST00000542303 CHD1O14646 1710 aa25.95■■□□□ 1.74
MRPL48-210ENST00000542303 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
MRPL48-210ENST00000542303 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
MRPL48-210ENST00000542303 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
MRPL48-210ENST00000542303 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
MRPL48-210ENST00000542303 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
MRPL48-210ENST00000542303 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
MRPL48-210ENST00000542303 SOGA1O94964 1423 aa25.88■■□□□ 1.73
MRPL48-210ENST00000542303 CUX1P39880 1505 aa25.88■■□□□ 1.73
MRPL48-210ENST00000542303 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
MRPL48-210ENST00000542303 ARHGEF11O15085 1522 aa25.82■■□□□ 1.72
MRPL48-210ENST00000542303 FBLN2P98095 1184 aa25.81■■□□□ 1.72
MRPL48-210ENST00000542303 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
MRPL48-210ENST00000542303 SNAPC4Q5SXM2 1469 aa25.74■■□□□ 1.71
MRPL48-210ENST00000542303 PBRM1Q86U86 1689 aa25.68■■□□□ 1.7
MRPL48-210ENST00000542303 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
MRPL48-210ENST00000542303 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
MRPL48-210ENST00000542303 CHMP7Q8WUX9 453 aaPredicted RBP25.61■■□□□ 1.69
MRPL48-210ENST00000542303 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
MRPL48-210ENST00000542303 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
MRPL48-210ENST00000542303 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
MRPL48-210ENST00000542303 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
MRPL48-210ENST00000542303 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
MRPL48-210ENST00000542303 SYNJ2O15056 1496 aa25.57■■□□□ 1.68
MRPL48-210ENST00000542303 CLASP1Q7Z460 1538 aa25.56■■□□□ 1.68
MRPL48-210ENST00000542303 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
MRPL48-210ENST00000542303 BIVM-ERCC5R4GMW8 1640 aa25.54■■□□□ 1.68
MRPL48-210ENST00000542303 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
MRPL48-210ENST00000542303 WRNQ14191 1432 aaPredicted RBP eCLIP25.5■■□□□ 1.67
MRPL48-210ENST00000542303 ADAMTS12P58397 1594 aa25.39■■□□□ 1.65
MRPL48-210ENST00000542303 GRIN2AQ12879 1464 aa25.35■■□□□ 1.65
MRPL48-210ENST00000542303 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
MRPL48-210ENST00000542303 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
MRPL48-210ENST00000542303 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
MRPL48-210ENST00000542303 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
MRPL48-210ENST00000542303 NUP160Q12769 1436 aa25.22■■□□□ 1.63
MRPL48-210ENST00000542303 ERCC6L2Q5T890 1561 aa25.18■■□□□ 1.62
MRPL48-210ENST00000542303 SHROOM2Q13796 1616 aa25.15■■□□□ 1.62
MRPL48-210ENST00000542303 RUSC2Q8N2Y8 1516 aa25.03■■□□□ 1.6
MRPL48-210ENST00000542303 KIF27Q86VH2 1401 aa25■■□□□ 1.59
MRPL48-210ENST00000542303 CUL7Q14999 1698 aa24.99■■□□□ 1.59
MRPL48-210ENST00000542303 PRG4Q92954 1404 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms