RNA–Protein interactions for RNA: ENST00000322340.9

WDR20-202, Transcript of WD repeat domain 20, humanhuman

TSL 1 (best) BASIC

Gene WDR20, Length 3,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR20-202ENST00000322340 NISCHQ9Y2I1 1504 aa30.65■■■□□ 2.5
WDR20-202ENST00000322340 CCDC180Q9P1Z9 1646 aa26.48■■□□□ 1.83
WDR20-202ENST00000322340 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
WDR20-202ENST00000322340 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
WDR20-202ENST00000322340 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
WDR20-202ENST00000322340 HRCP23327 699 aa25.57■■□□□ 1.68
WDR20-202ENST00000322340 DCAF8L2P0C7V8 631 aa25.52■■□□□ 1.68
WDR20-202ENST00000322340 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
WDR20-202ENST00000322340 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
WDR20-202ENST00000322340 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
WDR20-202ENST00000322340 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
WDR20-202ENST00000322340 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
WDR20-202ENST00000322340 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
WDR20-202ENST00000322340 ABCC9O60706 1549 aa24.63■■□□□ 1.53
WDR20-202ENST00000322340 LOC105371045A0A1W2PR82 267 aa24.63■■□□□ 1.53
WDR20-202ENST00000322340 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
WDR20-202ENST00000322340 NACADO15069 1562 aa24.5■■□□□ 1.51
WDR20-202ENST00000322340 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.5
WDR20-202ENST00000322340 EHMT2Q96KQ7 1210 aa24.18■■□□□ 1.46
WDR20-202ENST00000322340 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
WDR20-202ENST00000322340 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
WDR20-202ENST00000322340 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
WDR20-202ENST00000322340 FAM9AQ8IZU1 332 aaPredicted RBP23.99■■□□□ 1.43
WDR20-202ENST00000322340 MYT1Q01538 1121 aa23.97■■□□□ 1.43
WDR20-202ENST00000322340 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
WDR20-202ENST00000322340 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
WDR20-202ENST00000322340 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
WDR20-202ENST00000322340 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
WDR20-202ENST00000322340 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
WDR20-202ENST00000322340 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.39
WDR20-202ENST00000322340 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
WDR20-202ENST00000322340 TRIM41Q8WV44 630 aa23.64■■□□□ 1.38
WDR20-202ENST00000322340 WIZO95785 1651 aa23.62■■□□□ 1.37
WDR20-202ENST00000322340 BAZ1AQ9NRL2 1556 aaPredicted RBP23.59■■□□□ 1.37
WDR20-202ENST00000322340 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
WDR20-202ENST00000322340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
WDR20-202ENST00000322340 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
WDR20-202ENST00000322340 TTBK1Q5TCY1 1321 aaPredicted RBP23.48■■□□□ 1.35
WDR20-202ENST00000322340 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
WDR20-202ENST00000322340 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
WDR20-202ENST00000322340 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
WDR20-202ENST00000322340 TOP2AP11388 1531 aaKnown RBP23.31■■□□□ 1.32
WDR20-202ENST00000322340 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
WDR20-202ENST00000322340 DIEXFQ68CQ4 756 aaKnown RBP23.22■■□□□ 1.31
WDR20-202ENST00000322340 PEG3Q9GZU2 1588 aa23.16■■□□□ 1.3
WDR20-202ENST00000322340 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
WDR20-202ENST00000322340 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
WDR20-202ENST00000322340 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
WDR20-202ENST00000322340 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
WDR20-202ENST00000322340 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
WDR20-202ENST00000322340 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
WDR20-202ENST00000322340 BCL11AQ9H165 835 aa22.7■■□□□ 1.22
WDR20-202ENST00000322340 HMGXB3Q12766 1538 aa22.66■■□□□ 1.22
WDR20-202ENST00000322340 ZNF316A6NFI3 1004 aaPredicted RBP22.65■■□□□ 1.22
WDR20-202ENST00000322340 MIER1Q8N108 512 aa22.63■■□□□ 1.21
WDR20-202ENST00000322340 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
WDR20-202ENST00000322340 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
WDR20-202ENST00000322340 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
WDR20-202ENST00000322340 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.21e-6■■■■■ 58.5
WDR20-202ENST00000322340 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
WDR20-202ENST00000322340 RANGAP1P46060 587 aaPredicted RBP22.51■■□□□ 1.19
WDR20-202ENST00000322340 ANP32EQ9BTT0 268 aa22.48■■□□□ 1.19
WDR20-202ENST00000322340 SOGA1O94964 1423 aa22.47■■□□□ 1.19
WDR20-202ENST00000322340 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
WDR20-202ENST00000322340 CEP162Q5TB80 1403 aa22.4■■□□□ 1.18
WDR20-202ENST00000322340 EEA1Q15075 1411 aa22.39■■□□□ 1.17
WDR20-202ENST00000322340 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
WDR20-202ENST00000322340 SUPT16HQ9Y5B9 1047 aaKnown RBP22.34■■□□□ 1.17
WDR20-202ENST00000322340 TSHZ2Q9NRE2 1034 aa22.33■■□□□ 1.16
WDR20-202ENST00000322340 TOP2BQ02880 1626 aa22.33■■□□□ 1.16
WDR20-202ENST00000322340 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
WDR20-202ENST00000322340 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
WDR20-202ENST00000322340 CFTRP13569 1480 aa22.29■■□□□ 1.16
WDR20-202ENST00000322340 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
WDR20-202ENST00000322340 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
WDR20-202ENST00000322340 KIF21BO75037 1637 aa22.18■■□□□ 1.14
WDR20-202ENST00000322340 CUX1P39880 1505 aa22.18■■□□□ 1.14
WDR20-202ENST00000322340 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
WDR20-202ENST00000322340 APLP2Q06481 763 aa22.12■■□□□ 1.13
WDR20-202ENST00000322340 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
WDR20-202ENST00000322340 BCANQ96GW7 911 aa22.1■■□□□ 1.13
WDR20-202ENST00000322340 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
WDR20-202ENST00000322340 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
WDR20-202ENST00000322340 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
WDR20-202ENST00000322340 ITGAEP38570 1179 aa21.94■■□□□ 1.1
WDR20-202ENST00000322340 KCNH8Q96L42 1107 aa21.94■■□□□ 1.1
WDR20-202ENST00000322340 PRKCSHP14314 528 aaPredicted RBP21.92■■□□□ 1.1
WDR20-202ENST00000322340 PRXQ9BXM0 1461 aa21.92■■□□□ 1.1
WDR20-202ENST00000322340 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
WDR20-202ENST00000322340 CLIP1P30622 1438 aa21.87■■□□□ 1.09
WDR20-202ENST00000322340 FANCD2Q9BXW9 1451 aa21.86■■□□□ 1.09
WDR20-202ENST00000322340 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
WDR20-202ENST00000322340 NESP48681 1621 aa21.83■■□□□ 1.09
WDR20-202ENST00000322340 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
WDR20-202ENST00000322340 FKBP8Q14318 412 aa21.81■■□□□ 1.08
WDR20-202ENST00000322340 RBM19Q9Y4C8 960 aaKnown RBP21.81■■□□□ 1.08
WDR20-202ENST00000322340 LAMC3Q9Y6N6 1575 aa21.77■■□□□ 1.08
WDR20-202ENST00000322340 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
WDR20-202ENST00000322340 CUX2O14529 1486 aa21.75■■□□□ 1.07
WDR20-202ENST00000322340 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms