RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
GARNL3-213ENST00000464616 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
GARNL3-213ENST00000464616 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
GARNL3-213ENST00000464616 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
GARNL3-213ENST00000464616 FOXD1Q16676 465 aa16.53■□□□□ 0.24
GARNL3-213ENST00000464616 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
GARNL3-213ENST00000464616 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
GARNL3-213ENST00000464616 ADRA2BP18089 450 aa15.59■□□□□ 0.09
GARNL3-213ENST00000464616 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
GARNL3-213ENST00000464616 MSH5O43196 834 aa15.52■□□□□ 0.08
GARNL3-213ENST00000464616 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
GARNL3-213ENST00000464616 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
GARNL3-213ENST00000464616 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
GARNL3-213ENST00000464616 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
GARNL3-213ENST00000464616 DMRT2Q9Y5R5 561 aa14.13□□□□□ -0.15
GARNL3-213ENST00000464616 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
GARNL3-213ENST00000464616 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
GARNL3-213ENST00000464616 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
GARNL3-213ENST00000464616 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-213ENST00000464616 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
GARNL3-213ENST00000464616 NPM3O75607 178 aaKnown RBP13.43□□□□□ -0.26
GARNL3-213ENST00000464616 KCNA4P22459 653 aa13.34□□□□□ -0.27
GARNL3-213ENST00000464616 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-213ENST00000464616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.3
GARNL3-213ENST00000464616 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
GARNL3-213ENST00000464616 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
GARNL3-213ENST00000464616 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
GARNL3-213ENST00000464616 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-213ENST00000464616 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
GARNL3-213ENST00000464616 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
GARNL3-213ENST00000464616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
GARNL3-213ENST00000464616 CAPN15O75808 1086 aa12.66□□□□□ -0.38
GARNL3-213ENST00000464616 APLP2Q06481 763 aa12.66□□□□□ -0.38
GARNL3-213ENST00000464616 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
GARNL3-213ENST00000464616 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-213ENST00000464616 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-213ENST00000464616 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-213ENST00000464616 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-213ENST00000464616 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
GARNL3-213ENST00000464616 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-213ENST00000464616 DSG3P32926 999 aa12.4□□□□□ -0.42
GARNL3-213ENST00000464616 ABCB7O75027 752 aa12.33□□□□□ -0.44
GARNL3-213ENST00000464616 ZBTB22O15209 634 aa12.18□□□□□ -0.46
GARNL3-213ENST00000464616 POLA2Q14181 598 aa12.15□□□□□ -0.46
GARNL3-213ENST00000464616 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-213ENST00000464616 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
GARNL3-213ENST00000464616 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
GARNL3-213ENST00000464616 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
GARNL3-213ENST00000464616 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
GARNL3-213ENST00000464616 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
GARNL3-213ENST00000464616 FBLN2P98095 1184 aa11.8□□□□□ -0.52
GARNL3-213ENST00000464616 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
GARNL3-213ENST00000464616 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
GARNL3-213ENST00000464616 POTEHQ6S545 545 aa11.64□□□□□ -0.55
GARNL3-213ENST00000464616 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
GARNL3-213ENST00000464616 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
GARNL3-213ENST00000464616 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
GARNL3-213ENST00000464616 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
GARNL3-213ENST00000464616 REM2Q8IYK8 340 aaPredicted RBP11.53□□□□□ -0.56
GARNL3-213ENST00000464616 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-213ENST00000464616 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-213ENST00000464616 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
GARNL3-213ENST00000464616 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
GARNL3-213ENST00000464616 SPDYE1Q8NFV5 336 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-213ENST00000464616 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
GARNL3-213ENST00000464616 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
GARNL3-213ENST00000464616 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
GARNL3-213ENST00000464616 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
GARNL3-213ENST00000464616 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
GARNL3-213ENST00000464616 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
GARNL3-213ENST00000464616 PRKAR2AP13861 404 aaKnown RBP11.16□□□□□ -0.62
GARNL3-213ENST00000464616 HAX1O00165 279 aa11.15□□□□□ -0.62
GARNL3-213ENST00000464616 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
GARNL3-213ENST00000464616 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
GARNL3-213ENST00000464616 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
GARNL3-213ENST00000464616 FARP1Q9Y4F1 1045 aaPredicted RBP10.9□□□□□ -0.66
GARNL3-213ENST00000464616 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
GARNL3-213ENST00000464616 FKBP8Q14318 412 aa10.86□□□□□ -0.67
GARNL3-213ENST00000464616 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
GARNL3-213ENST00000464616 CD44P16070 742 aaKnown RBP10.83□□□□□ -0.68
GARNL3-213ENST00000464616 EVX2Q03828 476 aa10.83□□□□□ -0.68
GARNL3-213ENST00000464616 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
GARNL3-213ENST00000464616 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
GARNL3-213ENST00000464616 PROM2Q8N271 834 aa10.79□□□□□ -0.68
GARNL3-213ENST00000464616 PAK3O75914 559 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-213ENST00000464616 MIER1Q8N108 512 aa10.75□□□□□ -0.69
GARNL3-213ENST00000464616 ZRANB1Q9UGI0 708 aa10.72□□□□□ -0.69
GARNL3-213ENST00000464616 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
GARNL3-213ENST00000464616 GABBR2O75899 941 aa10.69□□□□□ -0.7
GARNL3-213ENST00000464616 CLCN6P51797 869 aa10.67□□□□□ -0.7
GARNL3-213ENST00000464616 FBXO3Q9UK99 471 aa10.64□□□□□ -0.71
GARNL3-213ENST00000464616 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
GARNL3-213ENST00000464616 ZNF579Q8NAF0 562 aaKnown RBP10.6□□□□□ -0.71
GARNL3-213ENST00000464616 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-213ENST00000464616 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-213ENST00000464616 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
GARNL3-213ENST00000464616 PHF12Q96QT6 1004 aa10.52□□□□□ -0.73
GARNL3-213ENST00000464616 KLHL34Q8N239 644 aa10.47□□□□□ -0.73
GARNL3-213ENST00000464616 GALR2O43603 387 aaPredicted RBP10.46□□□□□ -0.73
GARNL3-213ENST00000464616 RASEFQ8IZ41 740 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms