RNA–Protein interactions for RNA: ENST00000523402.5

SORBS3-217, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 3

Gene SORBS3, Length 889 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-217ENST00000523402 NISCHQ9Y2I1 1504 aa39.14■■■■□ 3.86
SORBS3-217ENST00000523402 CCDC180Q9P1Z9 1646 aa35.06■■■■□ 3.2
SORBS3-217ENST00000523402 ABCC9O60706 1549 aa34.71■■■■□ 3.15
SORBS3-217ENST00000523402 RB1CC1Q8TDY2 1594 aa33.24■■■□□ 2.91
SORBS3-217ENST00000523402 NACADO15069 1562 aa33.09■■■□□ 2.89
SORBS3-217ENST00000523402 MYO15BQ96JP2 1530 aa32.8■■■□□ 2.84
SORBS3-217ENST00000523402 DCAF8L2P0C7V8 631 aa32.72■■■□□ 2.83
SORBS3-217ENST00000523402 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
SORBS3-217ENST00000523402 DCAF1Q9Y4B6 1507 aa32.44■■■□□ 2.78
SORBS3-217ENST00000523402 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
SORBS3-217ENST00000523402 DNAJC5BQ9UF47 199 aa32.32■■■□□ 2.76
SORBS3-217ENST00000523402 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.76
SORBS3-217ENST00000523402 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
SORBS3-217ENST00000523402 SHROOM4Q9ULL8 1493 aa32■■■□□ 2.71
SORBS3-217ENST00000523402 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
SORBS3-217ENST00000523402 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
SORBS3-217ENST00000523402 CC2D2AQ9P2K1 1620 aa31.41■■■□□ 2.62
SORBS3-217ENST00000523402 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
SORBS3-217ENST00000523402 NCAPD3P42695 1498 aa30.55■■■□□ 2.48
SORBS3-217ENST00000523402 SMARCA4P51532 1647 aa30.47■■■□□ 2.47
SORBS3-217ENST00000523402 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.47
SORBS3-217ENST00000523402 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
SORBS3-217ENST00000523402 BAZ1AQ9NRL2 1556 aaPredicted RBP30.39■■■□□ 2.46
SORBS3-217ENST00000523402 HMGXB3Q12766 1538 aa30.37■■■□□ 2.45
SORBS3-217ENST00000523402 PEG3Q9GZU2 1588 aa30.24■■■□□ 2.43
SORBS3-217ENST00000523402 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
SORBS3-217ENST00000523402 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
SORBS3-217ENST00000523402 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
SORBS3-217ENST00000523402 CUX2O14529 1486 aa29.95■■■□□ 2.39
SORBS3-217ENST00000523402 NESP48681 1621 aa29.88■■■□□ 2.37
SORBS3-217ENST00000523402 LAMC3Q9Y6N6 1575 aa29.81■■■□□ 2.36
SORBS3-217ENST00000523402 WIZO95785 1651 aa29.72■■■□□ 2.35
SORBS3-217ENST00000523402 PDS5BQ9NTI5 1447 aa29.63■■■□□ 2.33
SORBS3-217ENST00000523402 THOC2Q8NI27 1593 aaKnown RBP29.61■■■□□ 2.33
SORBS3-217ENST00000523402 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
SORBS3-217ENST00000523402 RSF1Q96T23 1441 aaPredicted RBP29.6■■■□□ 2.33
SORBS3-217ENST00000523402 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
SORBS3-217ENST00000523402 KIF21AQ7Z4S6 1674 aa29.5■■■□□ 2.31
SORBS3-217ENST00000523402 TOP2AP11388 1531 aaKnown RBP29.46■■■□□ 2.31
SORBS3-217ENST00000523402 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
SORBS3-217ENST00000523402 CFTRP13569 1480 aa29.34■■■□□ 2.29
SORBS3-217ENST00000523402 WDR62O43379 1518 aa29.29■■■□□ 2.28
SORBS3-217ENST00000523402 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
SORBS3-217ENST00000523402 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
SORBS3-217ENST00000523402 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
SORBS3-217ENST00000523402 PRDM2Q13029 1718 aa29■■■□□ 2.23
SORBS3-217ENST00000523402 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
SORBS3-217ENST00000523402 ABCC8Q09428 1581 aa28.73■■■□□ 2.19
SORBS3-217ENST00000523402 TOPBP1Q92547 1522 aa28.72■■■□□ 2.19
SORBS3-217ENST00000523402 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
SORBS3-217ENST00000523402 DNMBPQ6XZF7 1577 aa28.66■■■□□ 2.18
SORBS3-217ENST00000523402 ZNF608Q9ULD9 1512 aaPredicted RBP28.56■■■□□ 2.16
SORBS3-217ENST00000523402 OSCARQ8IYS5 282 aa28.52■■■□□ 2.16
SORBS3-217ENST00000523402 EIF4G3O43432 1585 aaKnown RBP28.45■■■□□ 2.15
SORBS3-217ENST00000523402 TARBP1Q13395 1621 aaKnown RBP28.45■■■□□ 2.14
SORBS3-217ENST00000523402 POLA1P09884 1462 aaPredicted RBP28.45■■■□□ 2.14
SORBS3-217ENST00000523402 AQRO60306 1485 aaKnown RBP eCLIP28.32■■■□□ 2.121e-7■■■■■ 31.6
SORBS3-217ENST00000523402 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
SORBS3-217ENST00000523402 CUX1P39880 1505 aa28.29■■■□□ 2.12
SORBS3-217ENST00000523402 SOGA1O94964 1423 aa28.29■■■□□ 2.12
SORBS3-217ENST00000523402 FGD5Q6ZNL6 1462 aa28.28■■■□□ 2.12
SORBS3-217ENST00000523402 WDR97A6NE52 1622 aa28.28■■■□□ 2.12
SORBS3-217ENST00000523402 TRIM41Q8WV44 630 aa28.27■■■□□ 2.12
SORBS3-217ENST00000523402 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
SORBS3-217ENST00000523402 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
SORBS3-217ENST00000523402 RIMBP3CA6NJZ7 1639 aa28.14■■■□□ 2.09
SORBS3-217ENST00000523402 RIMBP3BA6NNM3 1639 aa28.14■■■□□ 2.09
SORBS3-217ENST00000523402 RIMBP3Q9UFD9 1639 aa28.14■■■□□ 2.09
SORBS3-217ENST00000523402 CHD1O14646 1710 aa28.13■■■□□ 2.09
SORBS3-217ENST00000523402 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
SORBS3-217ENST00000523402 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
SORBS3-217ENST00000523402 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
SORBS3-217ENST00000523402 GRIN2BQ13224 1484 aa28.07■■■□□ 2.08
SORBS3-217ENST00000523402 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
SORBS3-217ENST00000523402 FBLN2P98095 1184 aa28.02■■■□□ 2.08
SORBS3-217ENST00000523402 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
SORBS3-217ENST00000523402 SYNJ2O15056 1496 aa27.95■■■□□ 2.07
SORBS3-217ENST00000523402 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
SORBS3-217ENST00000523402 WRNQ14191 1432 aaPredicted RBP eCLIP27.94■■■□□ 2.06
SORBS3-217ENST00000523402 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
SORBS3-217ENST00000523402 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
SORBS3-217ENST00000523402 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
SORBS3-217ENST00000523402 CHMP7Q8WUX9 453 aaPredicted RBP27.91■■■□□ 2.06
SORBS3-217ENST00000523402 PBRM1Q86U86 1689 aa27.91■■■□□ 2.06
SORBS3-217ENST00000523402 SYNJ1O43426 1573 aa27.9■■■□□ 2.06
SORBS3-217ENST00000523402 ARAP1Q96P48 1450 aa27.84■■■□□ 2.05
SORBS3-217ENST00000523402 CYB5RLQ6IPT4 315 aa27.78■■■□□ 2.04
SORBS3-217ENST00000523402 ADAMTS12P58397 1594 aa27.72■■■□□ 2.03
SORBS3-217ENST00000523402 GRIN2AQ12879 1464 aa27.7■■■□□ 2.03
SORBS3-217ENST00000523402 ERICH3Q5RHP9 1530 aa27.69■■■□□ 2.02
SORBS3-217ENST00000523402 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
SORBS3-217ENST00000523402 NUP160Q12769 1436 aa27.63■■■□□ 2.01
SORBS3-217ENST00000523402 CEP170Q5SW79 1584 aa27.56■■■□□ 2
SORBS3-217ENST00000523402 SHROOM2Q13796 1616 aa27.47■■□□□ 1.99
SORBS3-217ENST00000523402 ERCC6L2Q5T890 1561 aa27.4■■□□□ 1.98
SORBS3-217ENST00000523402 KIF27Q86VH2 1401 aa27.39■■□□□ 1.97
SORBS3-217ENST00000523402 TRHP20396 242 aaPredicted RBP27.38■■□□□ 1.97
SORBS3-217ENST00000523402 RUSC2Q8N2Y8 1516 aa27.33■■□□□ 1.97
SORBS3-217ENST00000523402 IGF1RP08069 1367 aa27.33■■□□□ 1.97
SORBS3-217ENST00000523402 CUL7Q14999 1698 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms