RNA–Protein interactions for RNA: ENST00000518714.5

CCNC-207, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-207ENST00000518714 NISCHQ9Y2I1 1504 aa45.7■■■■■ 4.91
CCNC-207ENST00000518714 CCDC180Q9P1Z9 1646 aa40.6■■■■■ 4.09
CCNC-207ENST00000518714 ABCC9O60706 1549 aa39.39■■■■□ 3.9
CCNC-207ENST00000518714 ZCCHC6Q5VYS8 1495 aaKnown RBP38.12■■■■□ 3.69
CCNC-207ENST00000518714 NACADO15069 1562 aa38.09■■■■□ 3.69
CCNC-207ENST00000518714 RB1CC1Q8TDY2 1594 aa38.07■■■■□ 3.68
CCNC-207ENST00000518714 MYO15BQ96JP2 1530 aa37.98■■■■□ 3.67
CCNC-207ENST00000518714 DCAF8L2P0C7V8 631 aa37.93■■■■□ 3.66
CCNC-207ENST00000518714 DCAF1Q9Y4B6 1507 aa37.88■■■■□ 3.65
CCNC-207ENST00000518714 UNC13AQ9UPW8 1703 aa37.24■■■■□ 3.55
CCNC-207ENST00000518714 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
CCNC-207ENST00000518714 BICRAQ9NZM4 1560 aa36.91■■■■□ 3.5
CCNC-207ENST00000518714 PABPN1Q86U42 306 aaKnown RBP eCLIP36.8■■■■□ 3.48
CCNC-207ENST00000518714 SHROOM4Q9ULL8 1493 aa36.61■■■■□ 3.45
CCNC-207ENST00000518714 DNAJC5BQ9UF47 199 aa35.95■■■■□ 3.35
CCNC-207ENST00000518714 EIF4G1Q04637 1599 aaKnown RBP35.91■■■■□ 3.34
CCNC-207ENST00000518714 CC2D2AQ9P2K1 1620 aa35.71■■■■□ 3.31
CCNC-207ENST00000518714 CECR2Q9BXF3 1484 aa35.53■■■■□ 3.28
CCNC-207ENST00000518714 SMARCA4P51532 1647 aa35.42■■■■□ 3.26
CCNC-207ENST00000518714 BAZ1AQ9NRL2 1556 aaPredicted RBP35.42■■■■□ 3.26
CCNC-207ENST00000518714 MROH2BQ7Z745 1585 aa35.19■■■■□ 3.22
CCNC-207ENST00000518714 ATAD2BQ9ULI0 1458 aa35.16■■■■□ 3.22
CCNC-207ENST00000518714 SMARCA2P51531 1590 aa35.15■■■■□ 3.22
CCNC-207ENST00000518714 NCAPD3P42695 1498 aa35.13■■■■□ 3.21
CCNC-207ENST00000518714 PEG3Q9GZU2 1588 aa35.11■■■■□ 3.21
CCNC-207ENST00000518714 HMGXB3Q12766 1538 aa35■■■■□ 3.19
CCNC-207ENST00000518714 BAZ1BQ9UIG0 1483 aaKnown RBP34.87■■■■□ 3.17
CCNC-207ENST00000518714 RSF1Q96T23 1441 aaPredicted RBP34.86■■■■□ 3.17
CCNC-207ENST00000518714 WIZO95785 1651 aa34.84■■■■□ 3.17
CCNC-207ENST00000518714 TOP2AP11388 1531 aaKnown RBP34.49■■■■□ 3.11
CCNC-207ENST00000518714 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
CCNC-207ENST00000518714 NESP48681 1621 aa34.16■■■■□ 3.06
CCNC-207ENST00000518714 CADPSQ9ULU8 1353 aa34.09■■■■□ 3.05
CCNC-207ENST00000518714 CCDC88BA6NC98 1476 aa34.05■■■■□ 3.04
CCNC-207ENST00000518714 SUPT5HO00267 1087 aaKnown RBP34.02■■■■□ 3.04
CCNC-207ENST00000518714 CFTRP13569 1480 aa33.95■■■■□ 3.03
CCNC-207ENST00000518714 ERCC6Q03468 1493 aa33.95■■■■□ 3.02
CCNC-207ENST00000518714 PDS5BQ9NTI5 1447 aa33.9■■■■□ 3.02
CCNC-207ENST00000518714 KIF21AQ7Z4S6 1674 aa33.82■■■■□ 3
CCNC-207ENST00000518714 PRDM2Q13029 1718 aa33.78■■■■□ 3
CCNC-207ENST00000518714 FANCD2Q9BXW9 1451 aa33.69■■■□□ 2.98
CCNC-207ENST00000518714 THOC2Q8NI27 1593 aaKnown RBP33.67■■■□□ 2.98
CCNC-207ENST00000518714 CEP164Q9UPV0 1460 aa33.64■■■□□ 2.98
CCNC-207ENST00000518714 CUX2O14529 1486 aa33.58■■■□□ 2.97
CCNC-207ENST00000518714 MRC2Q9UBG0 1479 aa33.55■■■□□ 2.96
CCNC-207ENST00000518714 WDR62O43379 1518 aa33.47■■■□□ 2.95
CCNC-207ENST00000518714 URB2Q14146 1524 aaKnown RBP33.35■■■□□ 2.93
CCNC-207ENST00000518714 ABCC8Q09428 1581 aa33.23■■■□□ 2.91
CCNC-207ENST00000518714 TOPBP1Q92547 1522 aa33.19■■■□□ 2.9
CCNC-207ENST00000518714 DNMBPQ6XZF7 1577 aa33.19■■■□□ 2.9
CCNC-207ENST00000518714 CUX1P39880 1505 aa33.01■■■□□ 2.88
CCNC-207ENST00000518714 IFT140Q96RY7 1462 aa32.93■■■□□ 2.86
CCNC-207ENST00000518714 POLA1P09884 1462 aaPredicted RBP32.92■■■□□ 2.86
CCNC-207ENST00000518714 WRNQ14191 1432 aaPredicted RBP eCLIP32.86■■■□□ 2.85
CCNC-207ENST00000518714 FGD5Q6ZNL6 1462 aa32.85■■■□□ 2.85
CCNC-207ENST00000518714 TARBP1Q13395 1621 aaKnown RBP32.84■■■□□ 2.85
CCNC-207ENST00000518714 BIVM-ERCC5R4GMW8 1640 aa32.83■■■□□ 2.85
CCNC-207ENST00000518714 TOP2BQ02880 1626 aa32.81■■■□□ 2.84
CCNC-207ENST00000518714 SYNJ1O43426 1573 aa32.78■■■□□ 2.84
CCNC-207ENST00000518714 SOGA1O94964 1423 aa32.76■■■□□ 2.83
CCNC-207ENST00000518714 ZNF608Q9ULD9 1512 aaPredicted RBP32.74■■■□□ 2.83
CCNC-207ENST00000518714 RAD54L2Q9Y4B4 1467 aa32.73■■■□□ 2.83
CCNC-207ENST00000518714 EIF4G3O43432 1585 aaKnown RBP32.66■■■□□ 2.82
CCNC-207ENST00000518714 WDR97A6NE52 1622 aa32.64■■■□□ 2.82
CCNC-207ENST00000518714 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
CCNC-207ENST00000518714 AQRO60306 1485 aaKnown RBP eCLIP32.56■■■□□ 2.8
CCNC-207ENST00000518714 TDRD9Q8NDG6 1382 aaKnown RBP32.52■■■□□ 2.8
CCNC-207ENST00000518714 ABCA5Q8WWZ7 1642 aa32.45■■■□□ 2.78
CCNC-207ENST00000518714 GAPVD1Q14C86 1478 aa32.41■■■□□ 2.78
CCNC-207ENST00000518714 GRIN2BQ13224 1484 aa32.38■■■□□ 2.77
CCNC-207ENST00000518714 PBRM1Q86U86 1689 aa32.36■■■□□ 2.77
CCNC-207ENST00000518714 MAGI1Q96QZ7 1491 aaPredicted RBP32.3■■■□□ 2.76
CCNC-207ENST00000518714 SNAPC4Q5SXM2 1469 aa32.29■■■□□ 2.76
CCNC-207ENST00000518714 DNAJC5Q9H3Z4 198 aa32.26■■■□□ 2.75
CCNC-207ENST00000518714 CHD1O14646 1710 aa32.21■■■□□ 2.75
CCNC-207ENST00000518714 ERICH3Q5RHP9 1530 aa32.21■■■□□ 2.75
CCNC-207ENST00000518714 KIF27Q86VH2 1401 aa32.17■■■□□ 2.74
CCNC-207ENST00000518714 OSCARQ8IYS5 282 aa32.16■■■□□ 2.74
CCNC-207ENST00000518714 TRIM41Q8WV44 630 aa32.16■■■□□ 2.74
CCNC-207ENST00000518714 SYNJ2O15056 1496 aa32.15■■■□□ 2.74
CCNC-207ENST00000518714 ADAMTS12P58397 1594 aa32.11■■■□□ 2.73
CCNC-207ENST00000518714 FBLN2P98095 1184 aa32.07■■■□□ 2.72
CCNC-207ENST00000518714 CHMP7Q8WUX9 453 aaPredicted RBP32.06■■■□□ 2.72
CCNC-207ENST00000518714 FHAD1B1AJZ9 1412 aa32.05■■■□□ 2.72
CCNC-207ENST00000518714 IGF1RP08069 1367 aa32■■■□□ 2.71
CCNC-207ENST00000518714 GRIN2AQ12879 1464 aa31.97■■■□□ 2.71
CCNC-207ENST00000518714 CUL7Q14999 1698 aa31.96■■■□□ 2.71
CCNC-207ENST00000518714 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
CCNC-207ENST00000518714 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
CCNC-207ENST00000518714 CLASP1Q7Z460 1538 aa31.88■■■□□ 2.69
CCNC-207ENST00000518714 NUP160Q12769 1436 aa31.84■■■□□ 2.69
CCNC-207ENST00000518714 CARMIL1Q5VZK9 1371 aa31.8■■■□□ 2.68
CCNC-207ENST00000518714 CEP170Q5SW79 1584 aa31.8■■■□□ 2.68
CCNC-207ENST00000518714 EEA1Q15075 1411 aa31.72■■■□□ 2.67
CCNC-207ENST00000518714 ARHGEF11O15085 1522 aa31.68■■■□□ 2.66
CCNC-207ENST00000518714 RIMBP3CA6NJZ7 1639 aa31.67■■■□□ 2.66
CCNC-207ENST00000518714 RIMBP3BA6NNM3 1639 aa31.67■■■□□ 2.66
CCNC-207ENST00000518714 RIMBP3Q9UFD9 1639 aa31.67■■■□□ 2.66
CCNC-207ENST00000518714 RAPGEF2Q9Y4G8 1499 aa31.66■■■□□ 2.66
CCNC-207ENST00000518714 PRXQ9BXM0 1461 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms