RNA–Protein interactions for RNA: ENST00000475183.1

TRO-221, Transcript of trophinin, humanhuman

TSL 3

Gene TRO, Length 632 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-221ENST00000475183 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.09
TRO-221ENST00000475183 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
TRO-221ENST00000475183 ABCC9O60706 1549 aa23.78■■□□□ 1.4
TRO-221ENST00000475183 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
TRO-221ENST00000475183 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
TRO-221ENST00000475183 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
TRO-221ENST00000475183 NACADO15069 1562 aa23.18■■□□□ 1.3
TRO-221ENST00000475183 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
TRO-221ENST00000475183 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
TRO-221ENST00000475183 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
TRO-221ENST00000475183 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
TRO-221ENST00000475183 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
TRO-221ENST00000475183 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
TRO-221ENST00000475183 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
TRO-221ENST00000475183 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.134e-7■■□□□ 14.5
TRO-221ENST00000475183 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
TRO-221ENST00000475183 CECR2Q9BXF3 1484 aa21.68■■□□□ 1.06
TRO-221ENST00000475183 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
TRO-221ENST00000475183 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
TRO-221ENST00000475183 RSF1Q96T23 1441 aaPredicted RBP21.57■■□□□ 1.04
TRO-221ENST00000475183 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
TRO-221ENST00000475183 PEG3Q9GZU2 1588 aa21.53■■□□□ 1.04
TRO-221ENST00000475183 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
TRO-221ENST00000475183 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
TRO-221ENST00000475183 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.01
TRO-221ENST00000475183 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
TRO-221ENST00000475183 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
TRO-221ENST00000475183 WIZO95785 1651 aa21.33■■□□□ 1
TRO-221ENST00000475183 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
TRO-221ENST00000475183 TOP2AP11388 1531 aaKnown RBP21.27■■□□□ 1
TRO-221ENST00000475183 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
TRO-221ENST00000475183 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
TRO-221ENST00000475183 CFTRP13569 1480 aa20.75■□□□□ 0.91
TRO-221ENST00000475183 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
TRO-221ENST00000475183 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
TRO-221ENST00000475183 PRDM2Q13029 1718 aa20.64■□□□□ 0.9
TRO-221ENST00000475183 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
TRO-221ENST00000475183 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
TRO-221ENST00000475183 NESP48681 1621 aa20.47■□□□□ 0.87
TRO-221ENST00000475183 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
TRO-221ENST00000475183 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
TRO-221ENST00000475183 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
TRO-221ENST00000475183 CUX2O14529 1486 aa20.37■□□□□ 0.85
TRO-221ENST00000475183 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
TRO-221ENST00000475183 KIF21AQ7Z4S6 1674 aa20.3■□□□□ 0.84
TRO-221ENST00000475183 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
TRO-221ENST00000475183 DNAJC5Q9H3Z4 198 aa20.29■□□□□ 0.84
TRO-221ENST00000475183 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
TRO-221ENST00000475183 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
TRO-221ENST00000475183 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.84
TRO-221ENST00000475183 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.83
TRO-221ENST00000475183 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
TRO-221ENST00000475183 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
TRO-221ENST00000475183 CUX1P39880 1505 aa20.22■□□□□ 0.83
TRO-221ENST00000475183 SYNJ1O43426 1573 aa20.2■□□□□ 0.82
TRO-221ENST00000475183 WDR62O43379 1518 aa20.19■□□□□ 0.82
TRO-221ENST00000475183 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
TRO-221ENST00000475183 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
TRO-221ENST00000475183 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
TRO-221ENST00000475183 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
TRO-221ENST00000475183 EEA1Q15075 1411 aa20.03■□□□□ 0.8
TRO-221ENST00000475183 WDR97A6NE52 1622 aa20■□□□□ 0.79
TRO-221ENST00000475183 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
TRO-221ENST00000475183 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
TRO-221ENST00000475183 SOGA1O94964 1423 aa19.99■□□□□ 0.79
TRO-221ENST00000475183 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
TRO-221ENST00000475183 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
TRO-221ENST00000475183 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
TRO-221ENST00000475183 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
TRO-221ENST00000475183 ERICH3Q5RHP9 1530 aa19.79■□□□□ 0.76
TRO-221ENST00000475183 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
TRO-221ENST00000475183 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
TRO-221ENST00000475183 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
TRO-221ENST00000475183 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
TRO-221ENST00000475183 EIF4G3O43432 1585 aaKnown RBP19.73■□□□□ 0.75
TRO-221ENST00000475183 CUL7Q14999 1698 aa19.72■□□□□ 0.75
TRO-221ENST00000475183 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
TRO-221ENST00000475183 IGF1RP08069 1367 aa19.7■□□□□ 0.74
TRO-221ENST00000475183 ZNF608Q9ULD9 1512 aaPredicted RBP19.7■□□□□ 0.74
TRO-221ENST00000475183 KIF21BO75037 1637 aa19.69■□□□□ 0.74
TRO-221ENST00000475183 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRO-221ENST00000475183 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
TRO-221ENST00000475183 PBRM1Q86U86 1689 aa19.67■□□□□ 0.74
TRO-221ENST00000475183 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
TRO-221ENST00000475183 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
TRO-221ENST00000475183 CARMIL1Q5VZK9 1371 aa19.61■□□□□ 0.73
TRO-221ENST00000475183 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
TRO-221ENST00000475183 GOLGA3Q08378 1498 aa19.6■□□□□ 0.73
TRO-221ENST00000475183 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
TRO-221ENST00000475183 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
TRO-221ENST00000475183 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
TRO-221ENST00000475183 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
TRO-221ENST00000475183 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
TRO-221ENST00000475183 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
TRO-221ENST00000475183 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
TRO-221ENST00000475183 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
TRO-221ENST00000475183 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
TRO-221ENST00000475183 NUP160Q12769 1436 aa19.37■□□□□ 0.69
TRO-221ENST00000475183 CHD1O14646 1710 aa19.37■□□□□ 0.69
TRO-221ENST00000475183 CTTNBP2Q8WZ74 1663 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms