RNA–Protein interactions for RNA: ENST00000310614.11

MRPL48-201, Transcript of mitochondrial ribosomal protein L48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL48, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-201ENST00000310614 NISCHQ9Y2I1 1504 aa29.68■■■□□ 2.34
MRPL48-201ENST00000310614 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
MRPL48-201ENST00000310614 ABCC9O60706 1549 aa24.98■■□□□ 1.59
MRPL48-201ENST00000310614 ZCCHC6Q5VYS8 1495 aaKnown RBP24.86■■□□□ 1.57
MRPL48-201ENST00000310614 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.53
MRPL48-201ENST00000310614 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
MRPL48-201ENST00000310614 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
MRPL48-201ENST00000310614 NACADO15069 1562 aa24.43■■□□□ 1.5
MRPL48-201ENST00000310614 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
MRPL48-201ENST00000310614 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
MRPL48-201ENST00000310614 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
MRPL48-201ENST00000310614 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
MRPL48-201ENST00000310614 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
MRPL48-201ENST00000310614 PABPN1Q86U42 306 aaKnown RBP eCLIP23.45■■□□□ 1.34
MRPL48-201ENST00000310614 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
MRPL48-201ENST00000310614 CECR2Q9BXF3 1484 aa23.03■■□□□ 1.28
MRPL48-201ENST00000310614 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
MRPL48-201ENST00000310614 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
MRPL48-201ENST00000310614 MROH2BQ7Z745 1585 aa22.87■■□□□ 1.25
MRPL48-201ENST00000310614 EIF4G1Q04637 1599 aaKnown RBP22.86■■□□□ 1.25
MRPL48-201ENST00000310614 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
MRPL48-201ENST00000310614 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
MRPL48-201ENST00000310614 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
MRPL48-201ENST00000310614 WIZO95785 1651 aa22.65■■□□□ 1.22
MRPL48-201ENST00000310614 PEG3Q9GZU2 1588 aa22.65■■□□□ 1.22
MRPL48-201ENST00000310614 ATAD2BQ9ULI0 1458 aa22.62■■□□□ 1.21
MRPL48-201ENST00000310614 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
MRPL48-201ENST00000310614 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
MRPL48-201ENST00000310614 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
MRPL48-201ENST00000310614 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
MRPL48-201ENST00000310614 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
MRPL48-201ENST00000310614 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
MRPL48-201ENST00000310614 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
MRPL48-201ENST00000310614 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
MRPL48-201ENST00000310614 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
MRPL48-201ENST00000310614 CFTRP13569 1480 aa21.91■■□□□ 1.1
MRPL48-201ENST00000310614 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
MRPL48-201ENST00000310614 NESP48681 1621 aa21.77■■□□□ 1.07
MRPL48-201ENST00000310614 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
MRPL48-201ENST00000310614 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
MRPL48-201ENST00000310614 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
MRPL48-201ENST00000310614 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
MRPL48-201ENST00000310614 ABCC8Q09428 1581 aa21.58■■□□□ 1.04
MRPL48-201ENST00000310614 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
MRPL48-201ENST00000310614 ERCC6Q03468 1493 aa21.55■■□□□ 1.04
MRPL48-201ENST00000310614 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
MRPL48-201ENST00000310614 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
MRPL48-201ENST00000310614 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
MRPL48-201ENST00000310614 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
MRPL48-201ENST00000310614 TOP2BQ02880 1626 aa21.42■■□□□ 1.02
MRPL48-201ENST00000310614 CUX1P39880 1505 aa21.42■■□□□ 1.02
MRPL48-201ENST00000310614 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
MRPL48-201ENST00000310614 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
MRPL48-201ENST00000310614 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
MRPL48-201ENST00000310614 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
MRPL48-201ENST00000310614 WDR62O43379 1518 aa21.31■■□□□ 1
MRPL48-201ENST00000310614 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
MRPL48-201ENST00000310614 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
MRPL48-201ENST00000310614 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
MRPL48-201ENST00000310614 SOGA1O94964 1423 aa21.19■□□□□ 0.98
MRPL48-201ENST00000310614 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
MRPL48-201ENST00000310614 EEA1Q15075 1411 aa21.13■□□□□ 0.97
MRPL48-201ENST00000310614 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
MRPL48-201ENST00000310614 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
MRPL48-201ENST00000310614 CUX2O14529 1486 aa21.1■□□□□ 0.97
MRPL48-201ENST00000310614 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
MRPL48-201ENST00000310614 FAM9AQ8IZU1 332 aaPredicted RBP21.06■□□□□ 0.96
MRPL48-201ENST00000310614 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
MRPL48-201ENST00000310614 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
MRPL48-201ENST00000310614 RUSC2Q8N2Y8 1516 aa21■□□□□ 0.95
MRPL48-201ENST00000310614 TDRD9Q8NDG6 1382 aaKnown RBP20.98■□□□□ 0.95
MRPL48-201ENST00000310614 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
MRPL48-201ENST00000310614 GAPVD1Q14C86 1478 aa20.95■□□□□ 0.94
MRPL48-201ENST00000310614 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
MRPL48-201ENST00000310614 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
MRPL48-201ENST00000310614 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.94
MRPL48-201ENST00000310614 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
MRPL48-201ENST00000310614 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
MRPL48-201ENST00000310614 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
MRPL48-201ENST00000310614 IGF1RP08069 1367 aa20.87■□□□□ 0.93
MRPL48-201ENST00000310614 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
MRPL48-201ENST00000310614 CUL7Q14999 1698 aa20.82■□□□□ 0.92
MRPL48-201ENST00000310614 KIF21BO75037 1637 aa20.8■□□□□ 0.92
MRPL48-201ENST00000310614 CARMIL1Q5VZK9 1371 aa20.8■□□□□ 0.92
MRPL48-201ENST00000310614 PRXQ9BXM0 1461 aa20.79■□□□□ 0.92
MRPL48-201ENST00000310614 GOLGA3Q08378 1498 aa20.78■□□□□ 0.92
MRPL48-201ENST00000310614 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
MRPL48-201ENST00000310614 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
MRPL48-201ENST00000310614 RAPGEF2Q9Y4G8 1499 aa20.75■□□□□ 0.91
MRPL48-201ENST00000310614 FHAD1B1AJZ9 1412 aa20.74■□□□□ 0.91
MRPL48-201ENST00000310614 EHMT2Q96KQ7 1210 aa20.74■□□□□ 0.91
MRPL48-201ENST00000310614 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
MRPL48-201ENST00000310614 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
MRPL48-201ENST00000310614 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
MRPL48-201ENST00000310614 SYNJ2O15056 1496 aa20.65■□□□□ 0.9
MRPL48-201ENST00000310614 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.9
MRPL48-201ENST00000310614 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
MRPL48-201ENST00000310614 FBLN2P98095 1184 aa20.6■□□□□ 0.89
MRPL48-201ENST00000310614 GRIN2AQ12879 1464 aa20.58■□□□□ 0.89
MRPL48-201ENST00000310614 CTTNBP2Q8WZ74 1663 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms