RNA–Protein interactions for RNA: ENST00000508278.6

MRPL48-206, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 1,560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-206ENST00000508278 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
MRPL48-206ENST00000508278 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
MRPL48-206ENST00000508278 ABCC9O60706 1549 aa23.21■■□□□ 1.31
MRPL48-206ENST00000508278 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
MRPL48-206ENST00000508278 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
MRPL48-206ENST00000508278 NACADO15069 1562 aa22.14■■□□□ 1.14
MRPL48-206ENST00000508278 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
MRPL48-206ENST00000508278 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
MRPL48-206ENST00000508278 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
MRPL48-206ENST00000508278 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
MRPL48-206ENST00000508278 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
MRPL48-206ENST00000508278 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
MRPL48-206ENST00000508278 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
MRPL48-206ENST00000508278 SCRIBQ14160 1630 aa21.49■■□□□ 1.03
MRPL48-206ENST00000508278 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
MRPL48-206ENST00000508278 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
MRPL48-206ENST00000508278 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
MRPL48-206ENST00000508278 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
MRPL48-206ENST00000508278 CC2D2AQ9P2K1 1620 aa20.92■□□□□ 0.94
MRPL48-206ENST00000508278 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
MRPL48-206ENST00000508278 SMARCA4P51532 1647 aa20.52■□□□□ 0.87
MRPL48-206ENST00000508278 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
MRPL48-206ENST00000508278 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
MRPL48-206ENST00000508278 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
MRPL48-206ENST00000508278 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
MRPL48-206ENST00000508278 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
MRPL48-206ENST00000508278 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
MRPL48-206ENST00000508278 PEG3Q9GZU2 1588 aa20.32■□□□□ 0.84
MRPL48-206ENST00000508278 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
MRPL48-206ENST00000508278 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
MRPL48-206ENST00000508278 WIZO95785 1651 aa20.16■□□□□ 0.82
MRPL48-206ENST00000508278 NESP48681 1621 aa20.06■□□□□ 0.8
MRPL48-206ENST00000508278 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
MRPL48-206ENST00000508278 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
MRPL48-206ENST00000508278 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
MRPL48-206ENST00000508278 LAMC3Q9Y6N6 1575 aa19.9■□□□□ 0.78
MRPL48-206ENST00000508278 PDS5BQ9NTI5 1447 aa19.83■□□□□ 0.77
MRPL48-206ENST00000508278 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
MRPL48-206ENST00000508278 CUX2O14529 1486 aa19.76■□□□□ 0.75
MRPL48-206ENST00000508278 CFTRP13569 1480 aa19.76■□□□□ 0.75
MRPL48-206ENST00000508278 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
MRPL48-206ENST00000508278 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
MRPL48-206ENST00000508278 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
MRPL48-206ENST00000508278 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
MRPL48-206ENST00000508278 MRC2Q9UBG0 1479 aa19.62■□□□□ 0.73
MRPL48-206ENST00000508278 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
MRPL48-206ENST00000508278 WDR62O43379 1518 aa19.53■□□□□ 0.72
MRPL48-206ENST00000508278 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
MRPL48-206ENST00000508278 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
MRPL48-206ENST00000508278 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
MRPL48-206ENST00000508278 TOPBP1Q92547 1522 aa19.34■□□□□ 0.69
MRPL48-206ENST00000508278 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
MRPL48-206ENST00000508278 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
MRPL48-206ENST00000508278 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
MRPL48-206ENST00000508278 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
MRPL48-206ENST00000508278 CUX1P39880 1505 aa19.17■□□□□ 0.66
MRPL48-206ENST00000508278 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
MRPL48-206ENST00000508278 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
MRPL48-206ENST00000508278 SOGA1O94964 1423 aa19.12■□□□□ 0.65
MRPL48-206ENST00000508278 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
MRPL48-206ENST00000508278 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.65
MRPL48-206ENST00000508278 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
MRPL48-206ENST00000508278 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
MRPL48-206ENST00000508278 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
MRPL48-206ENST00000508278 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.63
MRPL48-206ENST00000508278 OSCARQ8IYS5 282 aa19.02■□□□□ 0.63
MRPL48-206ENST00000508278 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
MRPL48-206ENST00000508278 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
MRPL48-206ENST00000508278 FBLN2P98095 1184 aa18.91■□□□□ 0.62
MRPL48-206ENST00000508278 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
MRPL48-206ENST00000508278 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
MRPL48-206ENST00000508278 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
MRPL48-206ENST00000508278 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
MRPL48-206ENST00000508278 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
MRPL48-206ENST00000508278 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
MRPL48-206ENST00000508278 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
MRPL48-206ENST00000508278 MAGI1Q96QZ7 1491 aaPredicted RBP18.8■□□□□ 0.6
MRPL48-206ENST00000508278 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
MRPL48-206ENST00000508278 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
MRPL48-206ENST00000508278 CHD1O14646 1710 aa18.75■□□□□ 0.59
MRPL48-206ENST00000508278 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
MRPL48-206ENST00000508278 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
MRPL48-206ENST00000508278 PBRM1Q86U86 1689 aa18.71■□□□□ 0.59
MRPL48-206ENST00000508278 ARHGEF11O15085 1522 aa18.65■□□□□ 0.58
MRPL48-206ENST00000508278 FHAD1B1AJZ9 1412 aa18.65■□□□□ 0.58
MRPL48-206ENST00000508278 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
MRPL48-206ENST00000508278 ADAMTS12P58397 1594 aa18.62■□□□□ 0.57
MRPL48-206ENST00000508278 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
MRPL48-206ENST00000508278 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
MRPL48-206ENST00000508278 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
MRPL48-206ENST00000508278 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
MRPL48-206ENST00000508278 GRIN2AQ12879 1464 aa18.62■□□□□ 0.57
MRPL48-206ENST00000508278 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
MRPL48-206ENST00000508278 IGF1RP08069 1367 aa18.62■□□□□ 0.57
MRPL48-206ENST00000508278 CYB5RLQ6IPT4 315 aa18.58■□□□□ 0.56
MRPL48-206ENST00000508278 NUP160Q12769 1436 aa18.56■□□□□ 0.56
MRPL48-206ENST00000508278 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
MRPL48-206ENST00000508278 ARAP1Q96P48 1450 aa18.52■□□□□ 0.55
MRPL48-206ENST00000508278 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
MRPL48-206ENST00000508278 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms