RNA–Protein interactions for RNA: ENST00000517500.5

SORBS3-202, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-202ENST00000517500 NISCHQ9Y2I1 1504 aa52.05■■■■■ 5.92
SORBS3-202ENST00000517500 CCDC180Q9P1Z9 1646 aa46.32■■■■■ 5.01
SORBS3-202ENST00000517500 ABCC9O60706 1549 aa45.52■■■■■ 4.88
SORBS3-202ENST00000517500 RB1CC1Q8TDY2 1594 aa43.75■■■■■ 4.59
SORBS3-202ENST00000517500 NACADO15069 1562 aa43.7■■■■■ 4.59
SORBS3-202ENST00000517500 DCAF8L2P0C7V8 631 aa43.55■■■■■ 4.56
SORBS3-202ENST00000517500 MYO15BQ96JP2 1530 aa43.46■■■■■ 4.55
SORBS3-202ENST00000517500 ZCCHC6Q5VYS8 1495 aaKnown RBP43.26■■■■■ 4.52
SORBS3-202ENST00000517500 DCAF1Q9Y4B6 1507 aa43.14■■■■■ 4.5
SORBS3-202ENST00000517500 UNC13AQ9UPW8 1703 aa42.63■■■■■ 4.41
SORBS3-202ENST00000517500 PABPN1Q86U42 306 aaKnown RBP eCLIP42.56■■■■■ 4.43e-8■■□□□ 12
SORBS3-202ENST00000517500 BICRAQ9NZM4 1560 aa42.43■■■■■ 4.38
SORBS3-202ENST00000517500 DNAJC5BQ9UF47 199 aa42.16■■■■■ 4.34
SORBS3-202ENST00000517500 SCRIBQ14160 1630 aa42.12■■■■■ 4.33
SORBS3-202ENST00000517500 SHROOM4Q9ULL8 1493 aa42.06■■■■■ 4.32
SORBS3-202ENST00000517500 EIF4G1Q04637 1599 aaKnown RBP41.31■■■■■ 4.2
SORBS3-202ENST00000517500 CC2D2AQ9P2K1 1620 aa41.18■■■■■ 4.18
SORBS3-202ENST00000517500 CECR2Q9BXF3 1484 aa40.98■■■■■ 4.15
SORBS3-202ENST00000517500 NCAPD3P42695 1498 aa40.39■■■■■ 4.06
SORBS3-202ENST00000517500 SMARCA4P51532 1647 aa40.36■■■■■ 4.05
SORBS3-202ENST00000517500 BAZ1AQ9NRL2 1556 aaPredicted RBP40.34■■■■■ 4.05
SORBS3-202ENST00000517500 ATAD2BQ9ULI0 1458 aa40.29■■■■■ 4.04
SORBS3-202ENST00000517500 SMARCA2P51531 1590 aa40.22■■■■■ 4.03
SORBS3-202ENST00000517500 PEG3Q9GZU2 1588 aa40.08■■■■■ 4.01
SORBS3-202ENST00000517500 MROH2BQ7Z745 1585 aa40.06■■■■■ 4
SORBS3-202ENST00000517500 HMGXB3Q12766 1538 aa40.06■■■■■ 4
SORBS3-202ENST00000517500 BAZ1BQ9UIG0 1483 aaKnown RBP39.88■■■■□ 3.98
SORBS3-202ENST00000517500 RSF1Q96T23 1441 aaPredicted RBP39.58■■■■□ 3.93
SORBS3-202ENST00000517500 WIZO95785 1651 aa39.55■■■■□ 3.92
SORBS3-202ENST00000517500 NESP48681 1621 aa39.32■■■■□ 3.89
SORBS3-202ENST00000517500 LAMC3Q9Y6N6 1575 aa39.26■■■■□ 3.88
SORBS3-202ENST00000517500 ERCC6Q03468 1493 aa39.25■■■■□ 3.87
SORBS3-202ENST00000517500 CADPSQ9ULU8 1353 aa39.18■■■■□ 3.86
SORBS3-202ENST00000517500 TOP2AP11388 1531 aaKnown RBP39.16■■■■□ 3.86
SORBS3-202ENST00000517500 PDS5BQ9NTI5 1447 aa39.06■■■■□ 3.84
SORBS3-202ENST00000517500 CUX2O14529 1486 aa39.04■■■■□ 3.84
SORBS3-202ENST00000517500 CFTRP13569 1480 aa38.87■■■■□ 3.81
SORBS3-202ENST00000517500 KIF21AQ7Z4S6 1674 aa38.77■■■■□ 3.8
SORBS3-202ENST00000517500 CCDC88BA6NC98 1476 aa38.76■■■■□ 3.8
SORBS3-202ENST00000517500 THOC2Q8NI27 1593 aaKnown RBP38.75■■■■□ 3.79
SORBS3-202ENST00000517500 FANCD2Q9BXW9 1451 aa38.63■■■■□ 3.77
SORBS3-202ENST00000517500 MRC2Q9UBG0 1479 aa38.6■■■■□ 3.77
SORBS3-202ENST00000517500 CEP164Q9UPV0 1460 aa38.59■■■■□ 3.77
SORBS3-202ENST00000517500 WDR62O43379 1518 aa38.48■■■■□ 3.75
SORBS3-202ENST00000517500 PRDM2Q13029 1718 aa38.37■■■■□ 3.73
SORBS3-202ENST00000517500 SUPT5HO00267 1087 aaKnown RBP38.31■■■■□ 3.72
SORBS3-202ENST00000517500 URB2Q14146 1524 aaKnown RBP38.25■■■■□ 3.71
SORBS3-202ENST00000517500 DNAJC5Q9H3Z4 198 aa38.25■■■■□ 3.71
SORBS3-202ENST00000517500 ABCC8Q09428 1581 aa38.08■■■■□ 3.69
SORBS3-202ENST00000517500 TOPBP1Q92547 1522 aa37.98■■■■□ 3.67
SORBS3-202ENST00000517500 DNMBPQ6XZF7 1577 aa37.89■■■■□ 3.66
SORBS3-202ENST00000517500 IFT140Q96RY7 1462 aa37.84■■■■□ 3.65
SORBS3-202ENST00000517500 POLA1P09884 1462 aaPredicted RBP37.64■■■■□ 3.62
SORBS3-202ENST00000517500 ZNF608Q9ULD9 1512 aaPredicted RBP37.63■■■■□ 3.61
SORBS3-202ENST00000517500 TARBP1Q13395 1621 aaKnown RBP37.58■■■■□ 3.61
SORBS3-202ENST00000517500 CUX1P39880 1505 aa37.58■■■■□ 3.61
SORBS3-202ENST00000517500 SOGA1O94964 1423 aa37.55■■■■□ 3.6
SORBS3-202ENST00000517500 FGD5Q6ZNL6 1462 aa37.49■■■■□ 3.59
SORBS3-202ENST00000517500 OSCARQ8IYS5 282 aa37.48■■■■□ 3.59
SORBS3-202ENST00000517500 RAD54L2Q9Y4B4 1467 aa37.45■■■■□ 3.59
SORBS3-202ENST00000517500 AQRO60306 1485 aaKnown RBP eCLIP37.43■■■■□ 3.581e-7■■■■□ 24
SORBS3-202ENST00000517500 EIF4G3O43432 1585 aaKnown RBP37.39■■■■□ 3.58
SORBS3-202ENST00000517500 TDRD9Q8NDG6 1382 aaKnown RBP37.33■■■■□ 3.57
SORBS3-202ENST00000517500 WDR97A6NE52 1622 aa37.32■■■■□ 3.57
SORBS3-202ENST00000517500 WRNQ14191 1432 aaPredicted RBP eCLIP37.29■■■■□ 3.56
SORBS3-202ENST00000517500 TOP2BQ02880 1626 aa37.21■■■■□ 3.55
SORBS3-202ENST00000517500 ABCA10Q8WWZ4 1543 aa37.18■■■■□ 3.54
SORBS3-202ENST00000517500 BIVM-ERCC5R4GMW8 1640 aa37.18■■■■□ 3.54
SORBS3-202ENST00000517500 GRIN2BQ13224 1484 aa37.12■■■■□ 3.53
SORBS3-202ENST00000517500 SYNJ1O43426 1573 aa37.12■■■■□ 3.53
SORBS3-202ENST00000517500 GAPVD1Q14C86 1478 aa37.07■■■■□ 3.53
SORBS3-202ENST00000517500 MAGI1Q96QZ7 1491 aaPredicted RBP37.05■■■■□ 3.52
SORBS3-202ENST00000517500 FBLN2P98095 1184 aa37.01■■■■□ 3.52
SORBS3-202ENST00000517500 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.51
SORBS3-202ENST00000517500 ABCA5Q8WWZ7 1642 aa36.97■■■■□ 3.51
SORBS3-202ENST00000517500 CHMP7Q8WUX9 453 aaPredicted RBP36.95■■■■□ 3.51
SORBS3-202ENST00000517500 CHD1O14646 1710 aa36.94■■■■□ 3.5
SORBS3-202ENST00000517500 SYNJ2O15056 1496 aa36.89■■■■□ 3.5
SORBS3-202ENST00000517500 PBRM1Q86U86 1689 aa36.86■■■■□ 3.49
SORBS3-202ENST00000517500 ERICH3Q5RHP9 1530 aa36.74■■■■□ 3.47
SORBS3-202ENST00000517500 ARHGEF11O15085 1522 aa36.69■■■■□ 3.46
SORBS3-202ENST00000517500 RIMBP3CA6NJZ7 1639 aa36.69■■■■□ 3.46
SORBS3-202ENST00000517500 RIMBP3BA6NNM3 1639 aa36.69■■■■□ 3.46
SORBS3-202ENST00000517500 RIMBP3Q9UFD9 1639 aa36.69■■■■□ 3.46
SORBS3-202ENST00000517500 TRIM41Q8WV44 630 aa36.67■■■■□ 3.46
SORBS3-202ENST00000517500 FHAD1B1AJZ9 1412 aa36.67■■■■□ 3.46
SORBS3-202ENST00000517500 CLASP1Q7Z460 1538 aa36.65■■■■□ 3.46
SORBS3-202ENST00000517500 GRIN2AQ12879 1464 aa36.61■■■■□ 3.45
SORBS3-202ENST00000517500 ADAMTS12P58397 1594 aa36.6■■■■□ 3.45
SORBS3-202ENST00000517500 KIF27Q86VH2 1401 aa36.56■■■■□ 3.44
SORBS3-202ENST00000517500 IGF1RP08069 1367 aa36.52■■■■□ 3.44
SORBS3-202ENST00000517500 NUP160Q12769 1436 aa36.51■■■■□ 3.43
SORBS3-202ENST00000517500 CYB5RLQ6IPT4 315 aa36.46■■■■□ 3.43
SORBS3-202ENST00000517500 ARAP1Q96P48 1450 aa36.38■■■■□ 3.41
SORBS3-202ENST00000517500 CEP170Q5SW79 1584 aa36.37■■■■□ 3.41
SORBS3-202ENST00000517500 CUL7Q14999 1698 aa36.27■■■■□ 3.4
SORBS3-202ENST00000517500 CARMIL1Q5VZK9 1371 aa36.26■■■■□ 3.39
SORBS3-202ENST00000517500 JPH4Q96JJ6 628 aa36.21■■■■□ 3.39
SORBS3-202ENST00000517500 SHROOM2Q13796 1616 aa36.2■■■■□ 3.39
SORBS3-202ENST00000517500 KIAA0586Q9BVV6 1533 aa36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms