RNA–Protein interactions for RNA: ENST00000544819.5

MRPL48-214, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-214ENST00000544819 NISCHQ9Y2I1 1504 aa32.69■■■□□ 2.82
MRPL48-214ENST00000544819 ABCC9O60706 1549 aa29.2■■■□□ 2.27
MRPL48-214ENST00000544819 CCDC180Q9P1Z9 1646 aa29.18■■■□□ 2.26
MRPL48-214ENST00000544819 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
MRPL48-214ENST00000544819 NACADO15069 1562 aa27.62■■■□□ 2.01
MRPL48-214ENST00000544819 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
MRPL48-214ENST00000544819 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.98
MRPL48-214ENST00000544819 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
MRPL48-214ENST00000544819 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.96
MRPL48-214ENST00000544819 UNC13AQ9UPW8 1703 aa27.12■■□□□ 1.93
MRPL48-214ENST00000544819 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
MRPL48-214ENST00000544819 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
MRPL48-214ENST00000544819 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
MRPL48-214ENST00000544819 SCRIBQ14160 1630 aa26.64■■□□□ 1.85
MRPL48-214ENST00000544819 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
MRPL48-214ENST00000544819 CC2D2AQ9P2K1 1620 aa26.35■■□□□ 1.81
MRPL48-214ENST00000544819 EIF4G1Q04637 1599 aaKnown RBP26.32■■□□□ 1.8
MRPL48-214ENST00000544819 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
MRPL48-214ENST00000544819 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
MRPL48-214ENST00000544819 ATAD2BQ9ULI0 1458 aa25.5■■□□□ 1.67
MRPL48-214ENST00000544819 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
MRPL48-214ENST00000544819 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
MRPL48-214ENST00000544819 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
MRPL48-214ENST00000544819 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
MRPL48-214ENST00000544819 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
MRPL48-214ENST00000544819 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
MRPL48-214ENST00000544819 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
MRPL48-214ENST00000544819 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
MRPL48-214ENST00000544819 NESP48681 1621 aa25.14■■□□□ 1.61
MRPL48-214ENST00000544819 CUX2O14529 1486 aa25.09■■□□□ 1.61
MRPL48-214ENST00000544819 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
MRPL48-214ENST00000544819 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
MRPL48-214ENST00000544819 WIZO95785 1651 aa24.86■■□□□ 1.57
MRPL48-214ENST00000544819 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
MRPL48-214ENST00000544819 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
MRPL48-214ENST00000544819 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
MRPL48-214ENST00000544819 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
MRPL48-214ENST00000544819 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
MRPL48-214ENST00000544819 MRC2Q9UBG0 1479 aa24.56■■□□□ 1.52
MRPL48-214ENST00000544819 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
MRPL48-214ENST00000544819 CFTRP13569 1480 aa24.52■■□□□ 1.52
MRPL48-214ENST00000544819 WDR62O43379 1518 aa24.49■■□□□ 1.51
MRPL48-214ENST00000544819 FANCD2Q9BXW9 1451 aa24.48■■□□□ 1.51
MRPL48-214ENST00000544819 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
MRPL48-214ENST00000544819 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.49
MRPL48-214ENST00000544819 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
MRPL48-214ENST00000544819 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
MRPL48-214ENST00000544819 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
MRPL48-214ENST00000544819 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
MRPL48-214ENST00000544819 IFT140Q96RY7 1462 aa24■■□□□ 1.43
MRPL48-214ENST00000544819 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
MRPL48-214ENST00000544819 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
MRPL48-214ENST00000544819 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
MRPL48-214ENST00000544819 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
MRPL48-214ENST00000544819 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.4
MRPL48-214ENST00000544819 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
MRPL48-214ENST00000544819 POLA1P09884 1462 aaPredicted RBP23.8■■□□□ 1.4
MRPL48-214ENST00000544819 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
MRPL48-214ENST00000544819 RAD54L2Q9Y4B4 1467 aa23.74■■□□□ 1.39
MRPL48-214ENST00000544819 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
MRPL48-214ENST00000544819 SOGA1O94964 1423 aa23.71■■□□□ 1.39
MRPL48-214ENST00000544819 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
MRPL48-214ENST00000544819 CUX1P39880 1505 aa23.67■■□□□ 1.38
MRPL48-214ENST00000544819 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
MRPL48-214ENST00000544819 RIMBP3CA6NJZ7 1639 aa23.63■■□□□ 1.37
MRPL48-214ENST00000544819 RIMBP3BA6NNM3 1639 aa23.63■■□□□ 1.37
MRPL48-214ENST00000544819 RIMBP3Q9UFD9 1639 aa23.63■■□□□ 1.37
MRPL48-214ENST00000544819 FBLN2P98095 1184 aa23.6■■□□□ 1.37
MRPL48-214ENST00000544819 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
MRPL48-214ENST00000544819 CHD1O14646 1710 aa23.56■■□□□ 1.36
MRPL48-214ENST00000544819 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
MRPL48-214ENST00000544819 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
MRPL48-214ENST00000544819 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
MRPL48-214ENST00000544819 GRIN2BQ13224 1484 aa23.46■■□□□ 1.35
MRPL48-214ENST00000544819 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
MRPL48-214ENST00000544819 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
MRPL48-214ENST00000544819 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
MRPL48-214ENST00000544819 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.34
MRPL48-214ENST00000544819 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
MRPL48-214ENST00000544819 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
MRPL48-214ENST00000544819 CLASP1Q7Z460 1538 aa23.35■■□□□ 1.33
MRPL48-214ENST00000544819 WRNQ14191 1432 aaPredicted RBP eCLIP23.32■■□□□ 1.32
MRPL48-214ENST00000544819 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
MRPL48-214ENST00000544819 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
MRPL48-214ENST00000544819 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
MRPL48-214ENST00000544819 TOP2BQ02880 1626 aa23.27■■□□□ 1.32
MRPL48-214ENST00000544819 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
MRPL48-214ENST00000544819 GRIN2AQ12879 1464 aa23.16■■□□□ 1.3
MRPL48-214ENST00000544819 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
MRPL48-214ENST00000544819 ADAMTS12P58397 1594 aa23.12■■□□□ 1.29
MRPL48-214ENST00000544819 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
MRPL48-214ENST00000544819 NUP160Q12769 1436 aa23.1■■□□□ 1.29
MRPL48-214ENST00000544819 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
MRPL48-214ENST00000544819 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
MRPL48-214ENST00000544819 ERCC6L2Q5T890 1561 aa23.04■■□□□ 1.28
MRPL48-214ENST00000544819 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
MRPL48-214ENST00000544819 IGF1RP08069 1367 aa22.91■■□□□ 1.26
MRPL48-214ENST00000544819 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
MRPL48-214ENST00000544819 PRG4Q92954 1404 aaPredicted RBP22.88■■□□□ 1.25
MRPL48-214ENST00000544819 KIF27Q86VH2 1401 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms