Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 FCGRT-206ENST00000594823 819 ntTSL 514.71□□□□□ -0.052e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-212ENST00000598319 1888 ntTSL 514.33□□□□□ -0.112e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.172e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-207ENST00000595677 714 ntTSL 513.98□□□□□ -0.172e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-204ENST00000593381 566 ntTSL 412.82□□□□□ -0.362e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-211ENST00000598076 676 ntTSL 312.64□□□□□ -0.392e-7■■□□□ 13.4
SRSF1Q07955 UPF1-209ENST00000600310 750 ntTSL 417.39■□□□□ 0.374e-11■■□□□ 13.4
SRSF1Q07955 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.98■□□□□ 0.314e-11■■□□□ 13.4
SRSF1Q07955 NCAPH2-210ENST00000523045 970 ntTSL 516.11■□□□□ 0.174e-7■■□□□ 13.4
SRSF1Q07955 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.144e-11■■□□□ 13.4
SRSF1Q07955 CALR-205ENST00000587486 957 ntTSL 215.66■□□□□ 0.14e-11■■□□□ 13.4
SRSF1Q07955 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.58□□□□□ -0.084e-7■■□□□ 13.4
SRSF1Q07955 UPF1-206ENST00000598471 582 ntTSL 313.36□□□□□ -0.274e-11■■□□□ 13.4
SRSF1Q07955 CALR-207ENST00000590325 781 ntTSL 212.97□□□□□ -0.334e-11■■□□□ 13.4
SRSF1Q07955 UPF1-205ENST00000598209 551 ntTSL 412.79□□□□□ -0.364e-11■■□□□ 13.4
SRSF1Q07955 UPF1-211ENST00000600868 580 ntTSL 312.55□□□□□ -0.44e-11■■□□□ 13.4
SRSF1Q07955 UPF1-208ENST00000600012 501 ntTSL 512.26□□□□□ -0.454e-11■■□□□ 13.4
SRSF1Q07955 TM9SF4-204ENST00000442842 563 ntTSL 411.96□□□□□ -0.494e-11■■□□□ 13.4
SRSF1Q07955 CALR-206ENST00000588454 776 ntTSL 311.36□□□□□ -0.594e-11■■□□□ 13.4
SRSF1Q07955 TM9SF4-203ENST00000417389 553 ntTSL 410.15□□□□□ -0.784e-11■■□□□ 13.4
SRSF1Q07955 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC9.64□□□□□ -0.874e-11■■□□□ 13.4
SRSF1Q07955 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.464e-11■■□□□ 13.4
SRSF1Q07955 TM9SF4-205ENST00000450829 550 ntTSL 45.09□□□□□ -1.594e-11■■□□□ 13.4
SRSF1Q07955 TRMT2A-210ENST00000464535 943 ntTSL 218.93■□□□□ 0.629e-8■■□□□ 13.3
SRSF1Q07955 TRMT2A-211ENST00000468917 957 ntTSL 218.29■□□□□ 0.529e-8■■□□□ 13.3
SRSF1Q07955 TRMT2A-219ENST00000494641 1060 ntTSL 317.82■□□□□ 0.449e-8■■□□□ 13.3
SRSF1Q07955 TRMT2A-214ENST00000480460 378 ntTSL 313.41□□□□□ -0.269e-8■■□□□ 13.3
SRSF1Q07955 PNISR-203ENST00000460600 2178 ntTSL 24.69□□□□□ -1.663e-8■■□□□ 13.3
SRSF1Q07955 SUN1-234ENST00000493681 526 ntTSL 311.44□□□□□ -0.584e-6■■□□□ 13.3
SRSF1Q07955 SUN1-201ENST00000340926 2128 ntTSL 510.94□□□□□ -0.664e-6■■□□□ 13.3
SRSF1Q07955 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.24■□□□□ 0.836e-7■■□□□ 13.3
SRSF1Q07955 FAR2P4-201ENST00000416266 2210 ntTSL 27.14□□□□□ -1.276e-7■■□□□ 13.3
SRSF1Q07955 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.187e-8■■□□□ 13.3
SRSF1Q07955 XIST-208ENST00000602495 827 ntTSL 47.22□□□□□ -1.251e-10■■□□□ 13.3
SRSF1Q07955 UBFD1-206ENST00000566669 577 ntTSL 226.82■■□□□ 1.885e-8■■□□□ 13.3
SRSF1Q07955 UBFD1-210ENST00000571064 794 ntTSL 321.4■■□□□ 1.025e-8■■□□□ 13.3
SRSF1Q07955 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.85e-8■■□□□ 13.3
SRSF1Q07955 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.115e-8■■□□□ 13.3
SRSF1Q07955 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.665e-8■■□□□ 13.3
SRSF1Q07955 AC092123.2-201ENST00000611189 5421 ntBASIC10.27□□□□□ -0.773e-6■■□□□ 13.3
SRSF1Q07955 NCL-202ENST00000356936 890 ntTSL 316.05■□□□□ 0.161e-15■■□□□ 13.3
SRSF1Q07955 AHSA2-204ENST00000463681 453 ntTSL 522.34■■□□□ 1.173e-10■■□□□ 13.3
SRSF1Q07955 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.76■□□□□ 0.591e-7■■□□□ 13.3
SRSF1Q07955 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.011e-7■■□□□ 13.3
SRSF1Q07955 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.36■□□□□ 0.371e-7■■□□□ 13.3
SRSF1Q07955 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.581e-7■■□□□ 13.3
SRSF1Q07955 ARAP1-218ENST00000543868 507 ntTSL 214.55□□□□□ -0.087e-8■■□□□ 13.2
SRSF1Q07955 ARAP1-216ENST00000542596 699 ntTSL 513.88□□□□□ -0.197e-8■■□□□ 13.2
SRSF1Q07955 ARAP1-220ENST00000544958 473 ntTSL 312.85□□□□□ -0.357e-8■■□□□ 13.2
SRSF1Q07955 ARAP1-213ENST00000536993 315 ntTSL 211.69□□□□□ -0.547e-8■■□□□ 13.2
SRSF1Q07955 SUN1-206ENST00000413171 4488 ntTSL 59.22□□□□□ -0.932e-6■■□□□ 13.2
SRSF1Q07955 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.142e-6■■□□□ 13.2
SRSF1Q07955 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC7.6□□□□□ -1.192e-6■■□□□ 13.2
SRSF1Q07955 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC7.47□□□□□ -1.212e-6■■□□□ 13.2
SRSF1Q07955 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.242e-6■■□□□ 13.2
SRSF1Q07955 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.272e-6■■□□□ 13.2
SRSF1Q07955 PNISR-207ENST00000478777 2422 ntTSL 26.98□□□□□ -1.294e-8■■□□□ 13.2
SRSF1Q07955 NELFE-208ENST00000481121 1543 ntTSL 219.2■□□□□ 0.662e-8■■□□□ 13.2
SRSF1Q07955 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.522e-8■■□□□ 13.2
SRSF1Q07955 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.492e-8■■□□□ 13.2
SRSF1Q07955 NELFE-207ENST00000454913 914 ntTSL 516.42■□□□□ 0.222e-8■■□□□ 13.2
SRSF1Q07955 NELFE-211ENST00000492185 1786 ntTSL 215.85■□□□□ 0.132e-8■■□□□ 13.2
SRSF1Q07955 NELFE-204ENST00000436289 906 ntTSL 515.7■□□□□ 0.12e-8■■□□□ 13.2
SRSF1Q07955 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.222e-8■■□□□ 13.2
SRSF1Q07955 NELFE-209ENST00000488426 1855 ntTSL 511.38□□□□□ -0.592e-8■■□□□ 13.2
SRSF1Q07955 NELFE-205ENST00000441998 1075 ntAPPRIS ALT2 TSL 510.55□□□□□ -0.722e-8■■□□□ 13.2
SRSF1Q07955 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.413e-7■■□□□ 13.2
SRSF1Q07955 HNRNPA2B1-207ENST00000495810 482 ntTSL 29.76□□□□□ -0.855e-10■■□□□ 13.2
SRSF1Q07955 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.3■■□□□ 11e-8■■□□□ 13.2
SRSF1Q07955 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)13.31□□□□□ -0.281e-8■■□□□ 13.2
SRSF1Q07955 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC6.03□□□□□ -1.441e-8■■□□□ 13.2
SRSF1Q07955 CLUHP3-205ENST00000532304 1571 ntTSL 1 (best)13.74□□□□□ -0.213e-6■■□□□ 13.2
SRSF1Q07955 CLUHP3-204ENST00000525610 1449 ntTSL 212.28□□□□□ -0.443e-6■■□□□ 13.2
SRSF1Q07955 CLUHP3-207ENST00000563678 1303 ntBASIC11.74□□□□□ -0.533e-6■■□□□ 13.2
SRSF1Q07955 CLUHP3-201ENST00000254109 1812 ntTSL 1 (best) BASIC9.56□□□□□ -0.883e-6■■□□□ 13.2
SRSF1Q07955 HNRNPU-229ENST00000640440 871 ntTSL 313.7□□□□□ -0.221e-7■■□□□ 13.2
SRSF1Q07955 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.52■□□□□ 0.47e-8■■□□□ 13.2
SRSF1Q07955 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.44□□□□□ -0.587e-8■■□□□ 13.2
SRSF1Q07955 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.587e-8■■□□□ 13.2
SRSF1Q07955 AC022167.2-201ENST00000565934 2288 ntTSL 3 BASIC9.25□□□□□ -0.937e-8■■□□□ 13.2
SRSF1Q07955 TMCO3-204ENST00000462877 491 ntTSL 28.39□□□□□ -1.077e-8■■□□□ 13.2
SRSF1Q07955 TMCO3-211ENST00000622371 2822 ntTSL 46.18□□□□□ -1.427e-8■■□□□ 13.2
SRSF1Q07955 SPATA20-214ENST00000508528 512 ntTSL 511.95□□□□□ -0.58e-7■■□□□ 13.2
SRSF1Q07955 MGEA5-209ENST00000482611 1664 ntTSL 1 (best)4.94□□□□□ -1.621e-8■■□□□ 13.2
SRSF1Q07955 DDX39A-214ENST00000590556 575 ntTSL 217.12■□□□□ 0.332e-9■■□□□ 13.2
SRSF1Q07955 DDX39A-221ENST00000593026 657 ntTSL 313.44□□□□□ -0.262e-9■■□□□ 13.2
SRSF1Q07955 DDX39A-213ENST00000590315 566 ntTSL 511.42□□□□□ -0.582e-9■■□□□ 13.2
SRSF1Q07955 LZTR1-207ENST00000452988 878 ntTSL 310.91□□□□□ -0.661e-7■■□□□ 13.2
SRSF1Q07955 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.21□□□□□ -1.262e-9■■□□□ 13.2
SRSF1Q07955 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.42■■□□□ 1.666e-11■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.99■■□□□ 1.111e-7■■□□□ 13.2
SRSF1Q07955 MSANTD2-207ENST00000634413 599 ntTSL 521.66■■□□□ 1.066e-11■■□□□ 13.2
SRSF1Q07955 MSANTD2-205ENST00000527140 775 ntTSL 321.66■■□□□ 1.066e-11■■□□□ 13.2
SRSF1Q07955 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.911e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.29■□□□□ 0.841e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.66■□□□□ 0.741e-7■■□□□ 13.2
SRSF1Q07955 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.711e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.9■□□□□ 0.621e-7■■□□□ 13.2
SRSF1Q07955 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.83■□□□□ 0.61e-7■■□□□ 13.2
SRSF1Q07955 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.6■□□□□ 0.576e-11■■□□□ 13.2
Retrieved 100 of 14,836 protein–RNA pairs in 98.7 ms